EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000017990 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 8159 bases
Position: chr3:9617956-9626114
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000001254	Ribonuc_2-5A	PF06479.12	7.6e-40	1	1
ENSTNIP00000021154	Ribonuc_2-5A	PF06479.12	7.8e-40	1	1
ENSTNIP00000002624	Ribonuc_2-5A	PF06479.12	7.9e-40	1	1
ENSTNIP00000001242	Ribonuc_2-5A	PF06479.12	8.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021387	-	2883	-	ENSTNIP00000021154	961 (aa)	-	H3DKV6
ENSTNIT00000003430	-	2925	-	ENSTNIP00000001254	975 (aa)	-	H3BZ38
ENSTNIT00000002041	-	3006	-	ENSTNIP00000002624	1002 (aa)	-	H3C306
ENSTNIT00000002275	-	2757	-	ENSTNIP00000001242	919 (aa)	-	H3BZ26

Gene Model

Click here to download ENSTNIG00000017990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017990	ern1	98	90.755	ENSAPOG00000009999	ern1	87	90.725	Acanthochromis_polyacanthus
ENSTNIG00000017990	ern1	99	90.346	ENSACIG00000021716	ern1	86	91.426	Amphilophus_citrinellus
ENSTNIG00000017990	ern1	98	91.392	ENSAOCG00000012309	ern1	87	91.365	Amphiprion_ocellaris
ENSTNIG00000017990	ern1	98	90.861	ENSAPEG00000011263	ern1	98	90.978	Amphiprion_percula
ENSTNIG00000017990	ern1	98	91.711	ENSATEG00000024468	ern1	86	91.782	Anabas_testudineus
ENSTNIG00000017990	ern1	99	91.186	ENSACLG00000027919	ern1	87	92.102	Astatotilapia_calliptera
ENSTNIG00000017990	ern1	98	84.591	ENSAMXG00000000944	ern1	90	84.378	Astyanax_mexicanus
ENSTNIG00000017990	ern1	98	90.329	ENSCSEG00000014500	ern1	91	90.568	Cynoglossus_semilaevis
ENSTNIG00000017990	ern1	98	89.479	ENSCVAG00000002988	ern1	89	89.711	Cyprinodon_variegatus
ENSTNIG00000017990	ern1	98	81.818	ENSDARG00000013997	ern1	97	82.032	Danio_rerio
ENSTNIG00000017990	ern1	98	82.236	ENSELUG00000005957	ern1	92	82.341	Esox_lucius
ENSTNIG00000017990	ern1	98	90.755	ENSFHEG00000005578	ern1	89	90.254	Fundulus_heteroclitus
ENSTNIG00000017990	ern1	98	86.532	ENSGMOG00000011232	ern1	99	86.417	Gadus_morhua
ENSTNIG00000017990	ern1	99	89.579	ENSGAFG00000020231	ern1	93	87.834	Gambusia_affinis
ENSTNIG00000017990	ern1	98	90.042	ENSGACG00000011700	ern1	97	89.989	Gasterosteus_aculeatus
ENSTNIG00000017990	ern1	98	92.242	ENSHBUG00000012581	ern1	88	91.529	Haplochromis_burtoni
ENSTNIG00000017990	ern1	98	88.404	ENSHCOG00000016199	ern1	90	88.532	Hippocampus_comes
ENSTNIG00000017990	ern1	98	84.305	ENSIPUG00000011083	ern1	90	84.272	Ictalurus_punctatus
ENSTNIG00000017990	ern1	99	88.353	ENSKMAG00000019499	ern1	87	89.221	Kryptolebias_marmoratus
ENSTNIG00000017990	ern1	98	87.408	ENSLBEG00000025907	ern1	88	87.645	Labrus_bergylta
ENSTNIG00000017990	ern1	98	91.923	ENSMAMG00000023439	ern1	88	91.800	Mastacembelus_armatus
ENSTNIG00000017990	ern1	99	91.186	ENSMZEG00005003221	ern1	86	92.283	Maylandia_zebra
ENSTNIG00000017990	ern1	99	90.661	ENSMMOG00000007650	ern1	93	91.640	Mola_mola
ENSTNIG00000017990	ern1	98	90.648	ENSMALG00000017775	ern1	86	90.618	Monopterus_albus
ENSTNIG00000017990	ern1	98	92.136	ENSNBRG00000002179	ern1	88	92.209	Neolamprologus_brichardi
ENSTNIG00000017990	ern1	98	90.542	ENSONIG00000017169	ern1	97	90.608	Oreochromis_niloticus
ENSTNIG00000017990	ern1	98	89.160	ENSORLG00000008940	ern1	87	89.137	Oryzias_latipes
ENSTNIG00000017990	ern1	98	88.948	ENSORLG00020018387	ern1	87	88.924	Oryzias_latipes_hni
ENSTNIG00000017990	ern1	98	88.948	ENSORLG00015007946	ern1	87	89.282	Oryzias_latipes_hsok
ENSTNIG00000017990	ern1	98	89.267	ENSOMEG00000011741	ern1	88	88.409	Oryzias_melastigma
ENSTNIG00000017990	ern1	98	83.227	ENSPKIG00000005593	ern1	95	83.440	Paramormyrops_kingsleyae
ENSTNIG00000017990	ern1	98	89.915	ENSPMGG00000020442	ern1	92	89.006	Periophthalmus_magnuspinnatus
ENSTNIG00000017990	ern1	99	90.105	ENSPFOG00000007378	ern1	89	89.989	Poecilia_formosa
ENSTNIG00000017990	ern1	99	90.105	ENSPLAG00000014780	ern1	89	90.822	Poecilia_latipinna
ENSTNIG00000017990	ern1	99	90.211	ENSPMEG00000016324	ern1	90	89.674	Poecilia_mexicana
ENSTNIG00000017990	ern1	99	89.579	ENSPREG00000006286	ern1	89	89.463	Poecilia_reticulata
ENSTNIG00000017990	ern1	99	91.396	ENSPNYG00000017929	ern1	91	92.217	Pundamilia_nyererei
ENSTNIG00000017990	ern1	98	84.803	ENSPNAG00000029447	ern1	90	85.134	Pygocentrus_nattereri
ENSTNIG00000017990	ern1	100	89.282	ENSSMAG00000015042	ern1	86	90.618	Scophthalmus_maximus
ENSTNIG00000017990	ern1	99	92.025	ENSSDUG00000009098	ern1	85	93.033	Seriola_dumerili
ENSTNIG00000017990	ern1	99	91.710	ENSSLDG00000023254	ern1	85	92.712	Seriola_lalandi_dorsalis
ENSTNIG00000017990	ern1	99	90.241	ENSSPAG00000017539	ern1	88	91.104	Stegastes_partitus
ENSTNIG00000017990	ern1	96	94.811	ENSTRUG00000001041	ern1	89	95.005	Takifugu_rubripes
ENSTNIG00000017990	ern1	98	90.329	ENSXCOG00000010330	ern1	93	90.213	Xiphophorus_couchianus
ENSTNIG00000017990	ern1	99	89.474	ENSXMAG00000001310	ern1	89	89.357	Xiphophorus_maculatus