EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000018001 (Gene tree)
Gene ID: -
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 7611 bases
Position: chr3:9503229-9510839
Accession: ZDB-GENE-050913-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021167	zf-C2H2	PF00096.26	6.4e-30	1	5
ENSTNIP00000021167	zf-C2H2	PF00096.26	6.4e-30	2	5
ENSTNIP00000021167	zf-C2H2	PF00096.26	6.4e-30	3	5
ENSTNIP00000021167	zf-C2H2	PF00096.26	6.4e-30	4	5
ENSTNIP00000021167	zf-C2H2	PF00096.26	6.4e-30	5	5
ENSTNIP00000021167	zf-met	PF12874.7	5.8e-07	1	1
ENSTNIP00000021167	zf-C2H2_jaz	PF12171.8	5.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021400	-	2196	-	ENSTNIP00000021167	731 (aa)	-	H3DKW9

Gene Model

Click here to download ENSTNIG00000018001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000018001	e4f1	60	48.936	ENSTNIG00000005051	znf341	50	48.936
ENSTNIG00000018001	e4f1	56	37.662	ENSTNIG00000005798	zbtb16a	66	37.662
ENSTNIG00000018001	e4f1	76	43.478	ENSTNIG00000018984	-	96	43.478
ENSTNIG00000018001	e4f1	53	35.036	ENSTNIG00000011367	znf710b	53	35.036
ENSTNIG00000018001	e4f1	57	42.667	ENSTNIG00000002344	-	100	42.667
ENSTNIG00000018001	e4f1	61	40.244	ENSTNIG00000001164	ZNF628	99	40.244
ENSTNIG00000018001	e4f1	58	41.463	ENSTNIG00000000330	-	100	41.463
ENSTNIG00000018001	e4f1	59	35.263	ENSTNIG00000001159	si:dkey-89b17.4	99	35.366
ENSTNIG00000018001	e4f1	82	36.893	ENSTNIG00000019069	-	99	44.444
ENSTNIG00000018001	e4f1	61	43.373	ENSTNIG00000008200	-	100	43.373
ENSTNIG00000018001	e4f1	62	37.705	ENSTNIG00000003979	-	99	41.772
ENSTNIG00000018001	e4f1	53	35.135	ENSTNIG00000001921	-	65	43.750
ENSTNIG00000018001	e4f1	77	33.835	ENSTNIG00000003880	znf319b	85	41.667
ENSTNIG00000018001	e4f1	75	39.437	ENSTNIG00000005023	-	99	41.509
ENSTNIG00000018001	e4f1	62	40.449	ENSTNIG00000008100	-	99	40.449
ENSTNIG00000018001	e4f1	59	39.752	ENSTNIG00000005856	-	98	41.429
ENSTNIG00000018001	e4f1	58	37.037	ENSTNIG00000008154	-	99	37.037
ENSTNIG00000018001	e4f1	52	34.568	ENSTNIG00000000726	znf384l	50	34.568
ENSTNIG00000018001	e4f1	71	36.765	ENSTNIG00000009831	-	98	36.765
ENSTNIG00000018001	e4f1	60	36.310	ENSTNIG00000000528	-	97	36.364
ENSTNIG00000018001	e4f1	63	33.175	ENSTNIG00000000073	znf646	97	40.244
ENSTNIG00000018001	e4f1	60	41.111	ENSTNIG00000011188	-	97	43.421
ENSTNIG00000018001	e4f1	63	38.542	ENSTNIG00000008242	-	99	44.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018001	e4f1	100	55.447	ENSCSEG00000015852	e4f1	84	75.510	Cynoglossus_semilaevis
ENSTNIG00000018001	e4f1	100	67.957	ENSCVAG00000002788	e4f1	96	68.758	Cyprinodon_variegatus
ENSTNIG00000018001	e4f1	99	68.182	ENSFHEG00000022551	e4f1	93	67.617	Fundulus_heteroclitus
ENSTNIG00000018001	e4f1	88	80.000	ENSGMOG00000011409	e4f1	95	80.000	Gadus_morhua
ENSTNIG00000018001	e4f1	100	71.214	ENSGACG00000011808	e4f1	96	71.078	Gasterosteus_aculeatus
ENSTNIG00000018001	e4f1	100	65.782	ENSHCOG00000016455	e4f1	96	65.119	Hippocampus_comes
ENSTNIG00000018001	e4f1	100	50.200	ENSIPUG00000005379	e4f1	95	50.067	Ictalurus_punctatus
ENSTNIG00000018001	e4f1	100	71.579	ENSLBEG00000026373	e4f1	96	71.711	Labrus_bergylta
ENSTNIG00000018001	e4f1	100	70.765	ENSMMOG00000007612	e4f1	95	70.219	Mola_mola
ENSTNIG00000018001	e4f1	100	72.703	ENSMALG00000007314	e4f1	96	72.037	Monopterus_albus
ENSTNIG00000018001	e4f1	100	68.032	ENSORLG00000009160	e4f1	96	68.032	Oryzias_latipes
ENSTNIG00000018001	e4f1	100	66.284	ENSORLG00020017974	e4f1	96	66.284	Oryzias_latipes_hni
ENSTNIG00000018001	e4f1	100	69.139	ENSORLG00015007385	e4f1	96	69.272	Oryzias_latipes_hsok
ENSTNIG00000018001	e4f1	100	69.987	ENSOMEG00000012220	e4f1	96	69.057	Oryzias_melastigma
ENSTNIG00000018001	e4f1	100	56.342	ENSPKIG00000001942	e4f1	95	56.458	Paramormyrops_kingsleyae
ENSTNIG00000018001	e4f1	87	80.000	ENSPMGG00000020527	e4f1	90	86.301	Periophthalmus_magnuspinnatus
ENSTNIG00000018001	e4f1	99	52.497	ENSSFOG00015021291	e4f1	95	51.622	Scleropages_formosus
ENSTNIG00000018001	e4f1	100	73.052	ENSSMAG00000014720	e4f1	98	74.085	Scophthalmus_maximus
ENSTNIG00000018001	e4f1	100	48.340	ENSSPUG00000011420	E4F1	94	48.800	Sphenodon_punctatus
ENSTNIG00000018001	e4f1	100	83.784	ENSTRUG00000005176	e4f1	96	81.467	Takifugu_rubripes
ENSTNIG00000018001	e4f1	84	67.257	ENSXETG00000016091	e4f1	99	67.257	Xenopus_tropicalis