EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000018011 (Gene tree)
Gene ID: -
Gene Symbol: tbl3
Alias: cey|zgc:101778
Full Name: transducin (beta)-like 3
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 7044 bases
Position: chr3:9451257-9458300
Accession: ZDB-GENE-041114-104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021176	Utp13	PF08625.11	9.1e-42	1	1
ENSTNIP00000000378	Utp13	PF08625.11	9.6e-42	1	1
ENSTNIP00000004057	Utp13	PF08625.11	9.6e-42	1	1
ENSTNIP00000004008	Utp13	PF08625.11	9.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003963	-	2466	-	ENSTNIP00000004057	822 (aa)	-	H3C736
ENSTNIT00000000580	-	2460	-	ENSTNIP00000000378	820 (aa)	-	H3BWL6
ENSTNIT00000001325	-	2460	-	ENSTNIP00000004008	820 (aa)	-	H3C6Y7
ENSTNIT00000021410	-	2403	-	ENSTNIP00000021176	801 (aa)	-	H3DKX8

Gene Model

Click here to download ENSTNIG00000018011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000018011	tbl3	81	33.182	ENSTNIG00000005299	wdr3	57	32.900
ENSTNIG00000018011	tbl3	72	30.323	ENSTNIG00000014818	POC1A	62	30.323
ENSTNIG00000018011	tbl3	73	33.121	ENSTNIG00000013250	prpf4	57	33.121
ENSTNIG00000018011	tbl3	70	34.545	ENSTNIG00000003824	wdr5	81	33.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018011	tbl3	99	61.384	ENSG00000183751	TBL3	98	60.902	Homo_sapiens
ENSTNIG00000018011	tbl3	99	82.214	ENSAPOG00000021308	tbl3	89	81.522	Acanthochromis_polyacanthus
ENSTNIG00000018011	tbl3	99	60.579	ENSAMEG00000017654	TBL3	99	60.050	Ailuropoda_melanoleuca
ENSTNIG00000018011	tbl3	99	83.146	ENSACIG00000007459	tbl3	99	83.146	Amphilophus_citrinellus
ENSTNIG00000018011	tbl3	99	83.209	ENSAOCG00000000453	tbl3	89	82.609	Amphiprion_ocellaris
ENSTNIG00000018011	tbl3	98	82.979	ENSAPEG00000010228	tbl3	99	82.979	Amphiprion_percula
ENSTNIG00000018011	tbl3	99	83.747	ENSATEG00000024571	tbl3	98	79.091	Anabas_testudineus
ENSTNIG00000018011	tbl3	93	60.428	ENSAPLG00000008515	TBL3	99	60.159	Anas_platyrhynchos
ENSTNIG00000018011	tbl3	98	62.135	ENSANAG00000030472	TBL3	98	62.135	Aotus_nancymaae
ENSTNIG00000018011	tbl3	100	82.551	ENSACLG00000027954	tbl3	99	77.415	Astatotilapia_calliptera
ENSTNIG00000018011	tbl3	99	75.219	ENSAMXG00000042589	tbl3	89	74.035	Astyanax_mexicanus
ENSTNIG00000018011	tbl3	99	61.635	ENSBTAG00000020366	TBL3	99	59.700	Bos_taurus
ENSTNIG00000018011	tbl3	97	32.258	WBGene00013143	Y53C12B.1	99	32.426	Caenorhabditis_elegans
ENSTNIG00000018011	tbl3	98	62.214	ENSCJAG00000015245	TBL3	97	62.214	Callithrix_jacchus
ENSTNIG00000018011	tbl3	99	60.050	ENSCAFG00000019430	TBL3	98	68.364	Canis_familiaris
ENSTNIG00000018011	tbl3	99	60.124	ENSCAFG00020026321	TBL3	99	60.224	Canis_lupus_dingo
ENSTNIG00000018011	tbl3	99	60.843	ENSCHIG00000007747	TBL3	98	60.843	Capra_hircus
ENSTNIG00000018011	tbl3	99	60.274	ENSTSYG00000036142	TBL3	99	60.025	Carlito_syrichta
ENSTNIG00000018011	tbl3	98	57.179	ENSCAPG00000016762	TBL3	96	57.179	Cavia_aperea
ENSTNIG00000018011	tbl3	99	61.230	ENSCPOG00000005998	TBL3	99	61.230	Cavia_porcellus
ENSTNIG00000018011	tbl3	98	61.959	ENSCCAG00000034486	TBL3	97	61.959	Cebus_capucinus
ENSTNIG00000018011	tbl3	98	61.578	ENSCATG00000031298	TBL3	97	61.626	Cercocebus_atys
ENSTNIG00000018011	tbl3	99	61.355	ENSCLAG00000013342	TBL3	99	61.355	Chinchilla_lanigera
ENSTNIG00000018011	tbl3	98	60.991	ENSCSAG00000011191	TBL3	97	60.991	Chlorocebus_sabaeus
ENSTNIG00000018011	tbl3	98	65.293	ENSCPBG00000000253	TBL3	98	65.543	Chrysemys_picta_bellii
ENSTNIG00000018011	tbl3	98	46.532	ENSCING00000009521	-	99	46.532	Ciona_intestinalis
ENSTNIG00000018011	tbl3	98	61.372	ENSCANG00000031169	TBL3	97	61.372	Colobus_angolensis_palliatus
ENSTNIG00000018011	tbl3	99	61.481	ENSCGRG00001021817	Tbl3	99	61.481	Cricetulus_griseus_chok1gshd
ENSTNIG00000018011	tbl3	99	61.481	ENSCGRG00000013364	Tbl3	99	61.481	Cricetulus_griseus_crigri
ENSTNIG00000018011	tbl3	99	82.630	ENSCSEG00000015634	tbl3	100	80.449	Cynoglossus_semilaevis
ENSTNIG00000018011	tbl3	100	81.107	ENSCVAG00000002720	tbl3	99	80.423	Cyprinodon_variegatus
ENSTNIG00000018011	tbl3	99	65.461	ENSDARG00000052344	tbl3	93	64.397	Danio_rerio
ENSTNIG00000018011	tbl3	87	55.398	ENSDNOG00000019996	TBL3	98	55.446	Dasypus_novemcinctus
ENSTNIG00000018011	tbl3	97	61.814	ENSDORG00000007377	Tbl3	98	61.307	Dipodomys_ordii
ENSTNIG00000018011	tbl3	97	34.568	FBgn0033454	CG1671	99	34.568	Drosophila_melanogaster
ENSTNIG00000018011	tbl3	85	63.962	ENSETEG00000019403	TBL3	85	63.658	Echinops_telfairi
ENSTNIG00000018011	tbl3	98	55.164	ENSEBUG00000003526	tbl3	94	54.005	Eptatretus_burgeri
ENSTNIG00000018011	tbl3	99	61.230	ENSEASG00005004649	TBL3	99	60.674	Equus_asinus_asinus
ENSTNIG00000018011	tbl3	99	61.230	ENSECAG00000019299	TBL3	99	60.674	Equus_caballus
ENSTNIG00000018011	tbl3	88	66.161	ENSEEUG00000000761	-	60	66.161	Erinaceus_europaeus
ENSTNIG00000018011	tbl3	99	57.385	ENSELUG00000007394	tbl3	99	55.178	Esox_lucius
ENSTNIG00000018011	tbl3	99	61.055	ENSFCAG00000011740	TBL3	99	60.826	Felis_catus
ENSTNIG00000018011	tbl3	98	63.682	ENSFALG00000003409	TBL3	99	62.779	Ficedula_albicollis
ENSTNIG00000018011	tbl3	99	61.683	ENSFDAG00000007751	TBL3	99	61.683	Fukomys_damarensis
ENSTNIG00000018011	tbl3	99	81.491	ENSFHEG00000002234	tbl3	89	80.843	Fundulus_heteroclitus
ENSTNIG00000018011	tbl3	99	72.277	ENSGMOG00000011562	tbl3	100	72.277	Gadus_morhua
ENSTNIG00000018011	tbl3	98	64.581	ENSGALG00000005558	TBL3	99	64.163	Gallus_gallus
ENSTNIG00000018011	tbl3	99	80.994	ENSGAFG00000020165	tbl3	91	79.904	Gambusia_affinis
ENSTNIG00000018011	tbl3	100	81.152	ENSGACG00000011960	tbl3	99	81.706	Gasterosteus_aculeatus
ENSTNIG00000018011	tbl3	98	65.668	ENSGAGG00000024028	TBL3	99	65.228	Gopherus_agassizii
ENSTNIG00000018011	tbl3	99	61.509	ENSGGOG00000009378	TBL3	98	61.028	Gorilla_gorilla
ENSTNIG00000018011	tbl3	100	82.671	ENSHBUG00000011872	tbl3	98	80.857	Haplochromis_burtoni
ENSTNIG00000018011	tbl3	99	62.013	ENSHGLG00000002431	TBL3	99	61.577	Heterocephalus_glaber_female
ENSTNIG00000018011	tbl3	99	60.881	ENSHGLG00100012878	TBL3	99	60.451	Heterocephalus_glaber_male
ENSTNIG00000018011	tbl3	99	81.041	ENSHCOG00000016689	tbl3	90	80.723	Hippocampus_comes
ENSTNIG00000018011	tbl3	99	73.875	ENSIPUG00000003568	TBL3	89	73.464	Ictalurus_punctatus
ENSTNIG00000018011	tbl3	98	62.295	ENSSTOG00000012964	TBL3	98	62.295	Ictidomys_tridecemlineatus
ENSTNIG00000018011	tbl3	99	60.804	ENSJJAG00000004124	Tbl3	99	60.804	Jaculus_jaculus
ENSTNIG00000018011	tbl3	99	81.908	ENSKMAG00000020117	tbl3	99	80.497	Kryptolebias_marmoratus
ENSTNIG00000018011	tbl3	99	82.332	ENSLBEG00000026742	tbl3	90	82.332	Labrus_bergylta
ENSTNIG00000018011	tbl3	98	66.171	ENSLACG00000000615	TBL3	99	66.295	Latimeria_chalumnae
ENSTNIG00000018011	tbl3	99	72.739	ENSLOCG00000008853	tbl3	89	72.135	Lepisosteus_oculatus
ENSTNIG00000018011	tbl3	99	60.979	ENSLAFG00000004699	TBL3	99	61.230	Loxodonta_africana
ENSTNIG00000018011	tbl3	98	61.450	ENSMFAG00000030302	TBL3	97	61.450	Macaca_fascicularis
ENSTNIG00000018011	tbl3	98	61.323	ENSMMUG00000007943	TBL3	98	61.146	Macaca_mulatta
ENSTNIG00000018011	tbl3	98	61.372	ENSMNEG00000032603	TBL3	97	61.372	Macaca_nemestrina
ENSTNIG00000018011	tbl3	97	61.381	ENSMLEG00000043359	TBL3	98	61.381	Mandrillus_leucophaeus
ENSTNIG00000018011	tbl3	99	84.139	ENSMAMG00000023507	tbl3	89	83.673	Mastacembelus_armatus
ENSTNIG00000018011	tbl3	100	82.431	ENSMZEG00005000630	tbl3	98	78.378	Maylandia_zebra
ENSTNIG00000018011	tbl3	98	63.875	ENSMGAG00000005694	TBL3	98	63.955	Meleagris_gallopavo
ENSTNIG00000018011	tbl3	99	61.887	ENSMAUG00000008718	Tbl3	99	61.327	Mesocricetus_auratus
ENSTNIG00000018011	tbl3	99	61.809	ENSMICG00000012787	TBL3	88	61.235	Microcebus_murinus
ENSTNIG00000018011	tbl3	99	62.484	ENSMOCG00000019634	Tbl3	99	62.484	Microtus_ochrogaster
ENSTNIG00000018011	tbl3	99	83.718	ENSMMOG00000007551	tbl3	99	82.786	Mola_mola
ENSTNIG00000018011	tbl3	99	61.548	ENSMODG00000016091	TBL3	99	61.548	Monodelphis_domestica
ENSTNIG00000018011	tbl3	99	83.292	ENSMALG00000007013	tbl3	89	82.572	Monopterus_albus
ENSTNIG00000018011	tbl3	99	62.060	MGP_CAROLIEiJ_G0021199	Tbl3	99	61.863	Mus_caroli
ENSTNIG00000018011	tbl3	98	62.389	ENSMUSG00000040688	Tbl3	99	69.799	Mus_musculus
ENSTNIG00000018011	tbl3	98	61.791	MGP_PahariEiJ_G0023516	Tbl3	99	61.596	Mus_pahari
ENSTNIG00000018011	tbl3	98	62.389	MGP_SPRETEiJ_G0022110	Tbl3	99	69.333	Mus_spretus
ENSTNIG00000018011	tbl3	99	61.529	ENSMPUG00000015545	TBL3	98	61.529	Mustela_putorius_furo
ENSTNIG00000018011	tbl3	98	62.200	ENSMLUG00000011684	TBL3	99	61.982	Myotis_lucifugus
ENSTNIG00000018011	tbl3	99	60.477	ENSNGAG00000002428	Tbl3	99	60.477	Nannospalax_galili
ENSTNIG00000018011	tbl3	98	79.875	ENSNBRG00000003173	tbl3	99	79.875	Neolamprologus_brichardi
ENSTNIG00000018011	tbl3	98	61.323	ENSNLEG00000008889	TBL3	96	61.323	Nomascus_leucogenys
ENSTNIG00000018011	tbl3	92	48.148	ENSMEUG00000004011	TBL3	99	49.298	Notamacropus_eugenii
ENSTNIG00000018011	tbl3	95	59.896	ENSOPRG00000002527	-	95	60.053	Ochotona_princeps
ENSTNIG00000018011	tbl3	99	61.558	ENSODEG00000013930	TBL3	99	61.558	Octodon_degus
ENSTNIG00000018011	tbl3	100	83.032	ENSONIG00000002319	tbl3	99	83.541	Oreochromis_niloticus
ENSTNIG00000018011	tbl3	97	61.209	ENSOANG00000009819	TBL3	99	61.335	Ornithorhynchus_anatinus
ENSTNIG00000018011	tbl3	99	82.010	ENSORLG00000009312	tbl3	96	81.829	Oryzias_latipes
ENSTNIG00000018011	tbl3	99	81.886	ENSORLG00020017711	tbl3	96	81.527	Oryzias_latipes_hni
ENSTNIG00000018011	tbl3	99	81.762	ENSORLG00015007004	tbl3	88	81.486	Oryzias_latipes_hsok
ENSTNIG00000018011	tbl3	99	82.258	ENSOMEG00000012684	tbl3	99	78.545	Oryzias_melastigma
ENSTNIG00000018011	tbl3	99	60.302	ENSOGAG00000010104	TBL3	99	59.925	Otolemur_garnettii
ENSTNIG00000018011	tbl3	80	55.675	ENSOARG00000017059	TBL3	100	55.235	Ovis_aries
ENSTNIG00000018011	tbl3	99	61.258	ENSPPAG00000041939	TBL3	98	60.777	Pan_paniscus
ENSTNIG00000018011	tbl3	99	60.804	ENSPPRG00000000893	TBL3	99	60.576	Panthera_pardus
ENSTNIG00000018011	tbl3	98	63.655	ENSPTIG00000010377	TBL3	99	63.235	Panthera_tigris_altaica
ENSTNIG00000018011	tbl3	99	61.132	ENSPTRG00000007621	TBL3	98	60.652	Pan_troglodytes
ENSTNIG00000018011	tbl3	98	61.196	ENSPANG00000007024	TBL3	97	61.196	Papio_anubis
ENSTNIG00000018011	tbl3	99	69.830	ENSPKIG00000000136	tbl3	90	69.963	Paramormyrops_kingsleyae
ENSTNIG00000018011	tbl3	98	65.414	ENSPSIG00000013024	TBL3	98	64.969	Pelodiscus_sinensis
ENSTNIG00000018011	tbl3	98	80.202	ENSPMGG00000020660	tbl3	96	80.202	Periophthalmus_magnuspinnatus
ENSTNIG00000018011	tbl3	98	62.135	ENSPEMG00000009768	Tbl3	99	62.135	Peromyscus_maniculatus_bairdii
ENSTNIG00000018011	tbl3	90	54.196	ENSPMAG00000004860	tbl3	97	53.836	Petromyzon_marinus
ENSTNIG00000018011	tbl3	99	60.399	ENSPCIG00000021811	TBL3	99	59.975	Phascolarctos_cinereus
ENSTNIG00000018011	tbl3	99	80.870	ENSPFOG00000009834	tbl3	90	80.314	Poecilia_formosa
ENSTNIG00000018011	tbl3	99	80.870	ENSPLAG00000016437	tbl3	90	80.120	Poecilia_latipinna
ENSTNIG00000018011	tbl3	99	80.870	ENSPMEG00000019513	tbl3	90	80.314	Poecilia_mexicana
ENSTNIG00000018011	tbl3	98	61.578	ENSPPYG00000006977	TBL3	97	61.626	Pongo_abelii
ENSTNIG00000018011	tbl3	99	62.186	ENSPCOG00000019749	TBL3	98	62.186	Propithecus_coquereli
ENSTNIG00000018011	tbl3	99	62.563	ENSPVAG00000016710	TBL3	99	62.563	Pteropus_vampyrus
ENSTNIG00000018011	tbl3	97	75.318	ENSPNYG00000017137	tbl3	98	75.700	Pundamilia_nyererei
ENSTNIG00000018011	tbl3	99	73.875	ENSPNAG00000017527	tbl3	98	71.964	Pygocentrus_nattereri
ENSTNIG00000018011	tbl3	99	61.481	ENSRNOG00000013429	Tbl3	99	61.481	Rattus_norvegicus
ENSTNIG00000018011	tbl3	98	57.306	ENSRBIG00000032982	TBL3	96	57.360	Rhinopithecus_bieti
ENSTNIG00000018011	tbl3	98	60.941	ENSRROG00000026697	TBL3	97	60.991	Rhinopithecus_roxellana
ENSTNIG00000018011	tbl3	98	30.168	YLR222C	-	99	30.175	Saccharomyces_cerevisiae
ENSTNIG00000018011	tbl3	98	62.087	ENSSBOG00000013923	TBL3	97	62.087	Saimiri_boliviensis_boliviensis
ENSTNIG00000018011	tbl3	99	61.567	ENSSHAG00000015266	TBL3	99	61.262	Sarcophilus_harrisii
ENSTNIG00000018011	tbl3	99	70.705	ENSSFOG00015023537	tbl3	87	70.158	Scleropages_formosus
ENSTNIG00000018011	tbl3	99	83.692	ENSSMAG00000014338	tbl3	99	83.692	Scophthalmus_maximus
ENSTNIG00000018011	tbl3	99	83.128	ENSSDUG00000008158	tbl3	89	82.697	Seriola_dumerili
ENSTNIG00000018011	tbl3	99	83.457	ENSSLDG00000023733	tbl3	99	80.958	Seriola_lalandi_dorsalis
ENSTNIG00000018011	tbl3	98	50.408	ENSSPUG00000012939	TBL3	99	65.375	Sphenodon_punctatus
ENSTNIG00000018011	tbl3	99	83.271	ENSSPAG00000010659	tbl3	90	82.792	Stegastes_partitus
ENSTNIG00000018011	tbl3	99	60.602	ENSSSCG00000037686	TBL3	99	60.602	Sus_scrofa
ENSTNIG00000018011	tbl3	98	62.056	ENSTGUG00000006592	-	99	62.056	Taeniopygia_guttata
ENSTNIG00000018011	tbl3	99	89.728	ENSTRUG00000007010	tbl3	90	89.303	Takifugu_rubripes
ENSTNIG00000018011	tbl3	50	66.667	ENSTBEG00000000017	-	51	66.667	Tupaia_belangeri
ENSTNIG00000018011	tbl3	99	60.705	ENSTTRG00000011395	TBL3	98	60.705	Tursiops_truncatus
ENSTNIG00000018011	tbl3	97	61.401	ENSUAMG00000019276	TBL3	98	61.055	Ursus_americanus
ENSTNIG00000018011	tbl3	97	59.974	ENSUMAG00000022149	TBL3	98	59.521	Ursus_maritimus
ENSTNIG00000018011	tbl3	98	61.034	ENSVVUG00000009589	TBL3	98	61.034	Vulpes_vulpes
ENSTNIG00000018011	tbl3	99	58.405	ENSXETG00000007217	tbl3	99	57.365	Xenopus_tropicalis
ENSTNIG00000018011	tbl3	99	80.745	ENSXCOG00000010277	tbl3	99	80.745	Xiphophorus_couchianus
ENSTNIG00000018011	tbl3	99	81.118	ENSXMAG00000014866	tbl3	92	80.429	Xiphophorus_maculatus