EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000018214 (Gene tree)
Gene ID: -
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 12046 bases
Position: chr7:9968387-9980432
Accession: ZDB-GENE-030114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021380	tRNA-synt_1g	PF09334.11	9.6e-10	1	1
ENSTNIP00000021380	Anticodon_1	PF08264.13	3e-15	1	1
ENSTNIP00000021380	tRNA-synt_1	PF00133.22	3e-26	1	1
ENSTNIP00000021380	tRNA-synt_1e	PF01406.19	7.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021615	-	3894	-	ENSTNIP00000021380	1174 (aa)	-	H3DLI2

Gene Model

Click here to download ENSTNIG00000018214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018214	larsb	100	75.254	ENSG00000133706	LARS	99	76.896	Homo_sapiens
ENSTNIG00000018214	larsb	100	86.471	ENSAPOG00000010585	larsb	99	86.566	Acanthochromis_polyacanthus
ENSTNIG00000018214	larsb	100	75.381	ENSAMEG00000017584	LARS	100	75.381	Ailuropoda_melanoleuca
ENSTNIG00000018214	larsb	100	85.545	ENSACIG00000014026	larsb	99	85.401	Amphilophus_citrinellus
ENSTNIG00000018214	larsb	100	87.048	ENSAOCG00000016931	larsb	99	86.964	Amphiprion_ocellaris
ENSTNIG00000018214	larsb	100	87.132	ENSAPEG00000017720	larsb	99	87.048	Amphiprion_percula
ENSTNIG00000018214	larsb	100	83.446	ENSATEG00000010441	larsb	99	83.530	Anabas_testudineus
ENSTNIG00000018214	larsb	95	77.609	ENSAPLG00000008145	LARS	98	77.609	Anas_platyrhynchos
ENSTNIG00000018214	larsb	100	74.322	ENSACAG00000013916	LARS	99	74.831	Anolis_carolinensis
ENSTNIG00000018214	larsb	100	68.878	ENSANAG00000014375	LARS	99	68.878	Aotus_nancymaae
ENSTNIG00000018214	larsb	100	85.919	ENSACLG00000010881	larsb	99	85.750	Astatotilapia_calliptera
ENSTNIG00000018214	larsb	100	82.587	ENSAMXG00000019979	larsb	99	82.587	Astyanax_mexicanus
ENSTNIG00000018214	larsb	100	74.831	ENSBTAG00000006765	LARS	99	74.831	Bos_taurus
ENSTNIG00000018214	larsb	99	52.698	WBGene00003073	lars-1	99	52.867	Caenorhabditis_elegans
ENSTNIG00000018214	larsb	100	75.339	ENSCJAG00000021314	LARS	99	76.985	Callithrix_jacchus
ENSTNIG00000018214	larsb	100	75.508	ENSCAFG00000006431	LARS	99	75.508	Canis_familiaris
ENSTNIG00000018214	larsb	100	75.699	ENSCAFG00020025009	LARS	99	75.699	Canis_lupus_dingo
ENSTNIG00000018214	larsb	100	75.085	ENSCHIG00000014949	LARS	99	75.085	Capra_hircus
ENSTNIG00000018214	larsb	100	75.000	ENSTSYG00000001253	LARS	99	75.000	Carlito_syrichta
ENSTNIG00000018214	larsb	93	61.609	ENSCAPG00000015676	LARS	95	61.792	Cavia_aperea
ENSTNIG00000018214	larsb	100	74.322	ENSCPOG00000012329	LARS	99	74.322	Cavia_porcellus
ENSTNIG00000018214	larsb	99	75.488	ENSCCAG00000020789	LARS	99	75.488	Cebus_capucinus
ENSTNIG00000018214	larsb	95	76.628	ENSCATG00000033463	LARS	99	76.628	Cercocebus_atys
ENSTNIG00000018214	larsb	100	74.535	ENSCLAG00000011193	LARS	99	74.535	Chinchilla_lanigera
ENSTNIG00000018214	larsb	99	75.321	ENSCSAG00000012280	LARS	97	75.321	Chlorocebus_sabaeus
ENSTNIG00000018214	larsb	89	69.274	ENSCHOG00000009309	LARS	90	69.274	Choloepus_hoffmanni
ENSTNIG00000018214	larsb	100	76.754	ENSCPBG00000008415	LARS	99	77.668	Chrysemys_picta_bellii
ENSTNIG00000018214	larsb	99	61.402	ENSCING00000008535	-	99	61.402	Ciona_intestinalis
ENSTNIG00000018214	larsb	99	60.338	ENSCSAVG00000009040	-	97	69.459	Ciona_savignyi
ENSTNIG00000018214	larsb	100	75.254	ENSCANG00000031137	LARS	99	75.254	Colobus_angolensis_palliatus
ENSTNIG00000018214	larsb	93	72.653	ENSCGRG00001004647	Lars	99	72.653	Cricetulus_griseus_chok1gshd
ENSTNIG00000018214	larsb	100	72.058	ENSCGRG00000007284	Lars	99	72.058	Cricetulus_griseus_crigri
ENSTNIG00000018214	larsb	100	85.546	ENSCSEG00000014984	larsb	99	85.630	Cynoglossus_semilaevis
ENSTNIG00000018214	larsb	100	86.352	ENSCVAG00000014685	larsb	99	86.436	Cyprinodon_variegatus
ENSTNIG00000018214	larsb	68	83.791	ENSDARG00000019280	larsb	100	83.791	Danio_rerio
ENSTNIG00000018214	larsb	95	75.289	ENSDNOG00000017963	LARS	98	75.911	Dasypus_novemcinctus
ENSTNIG00000018214	larsb	100	73.260	ENSDORG00000014913	Lars	99	73.260	Dipodomys_ordii
ENSTNIG00000018214	larsb	99	56.594	FBgn0284253	LeuRS	99	56.594	Drosophila_melanogaster
ENSTNIG00000018214	larsb	94	60.432	ENSETEG00000003145	LARS	100	60.432	Echinops_telfairi
ENSTNIG00000018214	larsb	92	57.195	ENSEBUG00000014985	larsb	97	57.195	Eptatretus_burgeri
ENSTNIG00000018214	larsb	100	75.932	ENSEASG00005020569	LARS	100	78.473	Equus_asinus_asinus
ENSTNIG00000018214	larsb	100	75.847	ENSECAG00000008963	LARS	99	77.431	Equus_caballus
ENSTNIG00000018214	larsb	87	84.681	ENSEEUG00000014854	LARS	87	84.681	Erinaceus_europaeus
ENSTNIG00000018214	larsb	100	80.727	ENSELUG00000023311	larsb	99	80.642	Esox_lucius
ENSTNIG00000018214	larsb	100	75.169	ENSFCAG00000008715	LARS	99	76.714	Felis_catus
ENSTNIG00000018214	larsb	100	76.186	ENSFALG00000003209	LARS	93	76.186	Ficedula_albicollis
ENSTNIG00000018214	larsb	100	74.535	ENSFDAG00000020764	LARS	99	74.535	Fukomys_damarensis
ENSTNIG00000018214	larsb	91	86.740	ENSFHEG00000010437	larsb	99	86.878	Fundulus_heteroclitus
ENSTNIG00000018214	larsb	100	81.419	ENSGMOG00000013645	larsb	99	81.419	Gadus_morhua
ENSTNIG00000018214	larsb	100	76.715	ENSGALG00000007494	LARS	98	79.515	Gallus_gallus
ENSTNIG00000018214	larsb	100	85.366	ENSGAFG00000005029	larsb	99	85.450	Gambusia_affinis
ENSTNIG00000018214	larsb	99	84.108	ENSGACG00000020720	larsb	99	84.108	Gasterosteus_aculeatus
ENSTNIG00000018214	larsb	100	75.993	ENSGAGG00000002353	LARS	99	75.993	Gopherus_agassizii
ENSTNIG00000018214	larsb	100	75.169	ENSGGOG00000004103	LARS	99	75.169	Gorilla_gorilla
ENSTNIG00000018214	larsb	99	84.792	ENSHBUG00000003051	larsb	99	86.051	Haplochromis_burtoni
ENSTNIG00000018214	larsb	100	74.704	ENSHGLG00000006937	LARS	99	74.704	Heterocephalus_glaber_female
ENSTNIG00000018214	larsb	100	74.704	ENSHGLG00100002801	LARS	99	74.704	Heterocephalus_glaber_male
ENSTNIG00000018214	larsb	99	84.091	ENSHCOG00000003651	larsb	99	84.007	Hippocampus_comes
ENSTNIG00000018214	larsb	100	80.424	ENSIPUG00000010756	lars	99	80.517	Ictalurus_punctatus
ENSTNIG00000018214	larsb	100	75.508	ENSSTOG00000002356	LARS	99	75.508	Ictidomys_tridecemlineatus
ENSTNIG00000018214	larsb	100	73.773	ENSJJAG00000015265	Lars	99	73.773	Jaculus_jaculus
ENSTNIG00000018214	larsb	100	85.955	ENSKMAG00000009903	larsb	99	85.955	Kryptolebias_marmoratus
ENSTNIG00000018214	larsb	100	86.291	ENSLBEG00000025237	larsb	99	86.291	Labrus_bergylta
ENSTNIG00000018214	larsb	100	75.993	ENSLACG00000009321	LARS	99	76.500	Latimeria_chalumnae
ENSTNIG00000018214	larsb	99	79.153	ENSLOCG00000010442	larsb	99	79.068	Lepisosteus_oculatus
ENSTNIG00000018214	larsb	100	74.768	ENSLAFG00000000318	LARS	100	74.810	Loxodonta_africana
ENSTNIG00000018214	larsb	100	75.254	ENSMFAG00000038685	LARS	99	75.407	Macaca_fascicularis
ENSTNIG00000018214	larsb	100	75.169	ENSMMUG00000029787	LARS	99	75.169	Macaca_mulatta
ENSTNIG00000018214	larsb	100	73.220	ENSMNEG00000044014	LARS	99	73.220	Macaca_nemestrina
ENSTNIG00000018214	larsb	100	75.254	ENSMLEG00000037563	LARS	99	75.254	Mandrillus_leucophaeus
ENSTNIG00000018214	larsb	100	86.627	ENSMAMG00000021385	larsb	99	86.543	Mastacembelus_armatus
ENSTNIG00000018214	larsb	100	85.835	ENSMZEG00005002662	larsb	99	85.811	Maylandia_zebra
ENSTNIG00000018214	larsb	95	78.055	ENSMGAG00000009388	LARS	98	78.055	Meleagris_gallopavo
ENSTNIG00000018214	larsb	100	65.368	ENSMAUG00000003063	Lars	99	64.945	Mesocricetus_auratus
ENSTNIG00000018214	larsb	100	75.593	ENSMICG00000035589	-	99	75.593	Microcebus_murinus
ENSTNIG00000018214	larsb	100	62.288	ENSMICG00000035435	-	99	62.288	Microcebus_murinus
ENSTNIG00000018214	larsb	100	74.090	ENSMOCG00000002092	Lars	99	74.090	Microtus_ochrogaster
ENSTNIG00000018214	larsb	100	85.508	ENSMMOG00000013802	larsb	99	85.593	Mola_mola
ENSTNIG00000018214	larsb	100	69.822	ENSMODG00000010231	LARS	99	69.822	Monodelphis_domestica
ENSTNIG00000018214	larsb	100	84.454	ENSMALG00000018444	larsb	99	84.370	Monopterus_albus
ENSTNIG00000018214	larsb	100	74.344	MGP_CAROLIEiJ_G0022225	Lars	99	74.344	Mus_caroli
ENSTNIG00000018214	larsb	99	74.068	ENSMUSG00000024493	Lars	99	74.068	Mus_musculus
ENSTNIG00000018214	larsb	100	74.090	MGP_PahariEiJ_G0018958	Lars	99	74.090	Mus_pahari
ENSTNIG00000018214	larsb	100	74.344	MGP_SPRETEiJ_G0023135	Lars	99	74.344	Mus_spretus
ENSTNIG00000018214	larsb	100	75.424	ENSMPUG00000007844	LARS	99	75.424	Mustela_putorius_furo
ENSTNIG00000018214	larsb	100	74.852	ENSMLUG00000001125	LARS	100	74.852	Myotis_lucifugus
ENSTNIG00000018214	larsb	100	73.243	ENSNGAG00000011596	Lars	99	73.666	Nannospalax_galili
ENSTNIG00000018214	larsb	100	85.919	ENSNBRG00000005764	larsb	99	85.896	Neolamprologus_brichardi
ENSTNIG00000018214	larsb	100	74.767	ENSNLEG00000009816	LARS	99	74.767	Nomascus_leucogenys
ENSTNIG00000018214	larsb	53	70.886	ENSMEUG00000002332	-	55	70.886	Notamacropus_eugenii
ENSTNIG00000018214	larsb	79	75.401	ENSOPRG00000003076	LARS	83	75.401	Ochotona_princeps
ENSTNIG00000018214	larsb	99	73.407	ENSODEG00000004882	LARS	99	73.407	Octodon_degus
ENSTNIG00000018214	larsb	100	86.341	ENSONIG00000008493	larsb	99	86.172	Oreochromis_niloticus
ENSTNIG00000018214	larsb	100	72.306	ENSOANG00000005755	LARS	99	72.306	Ornithorhynchus_anatinus
ENSTNIG00000018214	larsb	100	75.445	ENSOCUG00000015684	LARS	99	75.445	Oryctolagus_cuniculus
ENSTNIG00000018214	larsb	100	85.534	ENSORLG00000001622	larsb	99	85.618	Oryzias_latipes
ENSTNIG00000018214	larsb	100	85.450	ENSORLG00020019950	larsb	99	85.909	Oryzias_latipes_hni
ENSTNIG00000018214	larsb	100	85.702	ENSORLG00015003895	larsb	99	85.786	Oryzias_latipes_hsok
ENSTNIG00000018214	larsb	100	86.039	ENSOMEG00000005677	larsb	99	85.800	Oryzias_melastigma
ENSTNIG00000018214	larsb	95	74.048	ENSOGAG00000008750	LARS	98	73.428	Otolemur_garnettii
ENSTNIG00000018214	larsb	100	74.915	ENSOARG00000015911	-	99	74.915	Ovis_aries
ENSTNIG00000018214	larsb	100	74.936	ENSOARG00000002454	-	100	74.936	Ovis_aries
ENSTNIG00000018214	larsb	100	75.169	ENSPPAG00000027964	LARS	99	75.169	Pan_paniscus
ENSTNIG00000018214	larsb	100	75.339	ENSPPRG00000023492	LARS	99	75.339	Panthera_pardus
ENSTNIG00000018214	larsb	100	75.169	ENSPTIG00000013110	LARS	99	75.169	Panthera_tigris_altaica
ENSTNIG00000018214	larsb	100	75.169	ENSPTRG00000017372	LARS	99	75.169	Pan_troglodytes
ENSTNIG00000018214	larsb	100	75.254	ENSPANG00000002663	LARS	99	75.254	Papio_anubis
ENSTNIG00000018214	larsb	98	79.289	ENSPKIG00000006650	larsb	99	76.962	Paramormyrops_kingsleyae
ENSTNIG00000018214	larsb	100	75.932	ENSPSIG00000015641	LARS	100	75.932	Pelodiscus_sinensis
ENSTNIG00000018214	larsb	68	88.294	ENSPMGG00000019556	LARS	100	88.294	Periophthalmus_magnuspinnatus
ENSTNIG00000018214	larsb	100	70.449	ENSPEMG00000010933	Lars	99	70.449	Peromyscus_maniculatus_bairdii
ENSTNIG00000018214	larsb	51	59.150	ENSPMAG00000005301	larsb	99	59.150	Petromyzon_marinus
ENSTNIG00000018214	larsb	100	73.773	ENSPCIG00000030572	LARS	99	73.773	Phascolarctos_cinereus
ENSTNIG00000018214	larsb	100	85.450	ENSPFOG00000002361	larsb	99	85.534	Poecilia_formosa
ENSTNIG00000018214	larsb	100	85.450	ENSPLAG00000016550	larsb	99	85.534	Poecilia_latipinna
ENSTNIG00000018214	larsb	100	85.366	ENSPMEG00000018422	larsb	99	85.450	Poecilia_mexicana
ENSTNIG00000018214	larsb	100	85.029	ENSPREG00000005668	larsb	99	85.114	Poecilia_reticulata
ENSTNIG00000018214	larsb	99	73.983	ENSPPYG00000015908	LARS	97	73.983	Pongo_abelii
ENSTNIG00000018214	larsb	89	72.727	ENSPCAG00000005621	LARS	99	72.727	Procavia_capensis
ENSTNIG00000018214	larsb	100	74.322	ENSPCOG00000019325	LARS	99	74.322	Propithecus_coquereli
ENSTNIG00000018214	larsb	95	69.162	ENSPVAG00000011237	LARS	98	69.073	Pteropus_vampyrus
ENSTNIG00000018214	larsb	100	86.029	ENSPNYG00000015254	larsb	99	85.859	Pundamilia_nyererei
ENSTNIG00000018214	larsb	100	80.864	ENSPNAG00000027191	larsb	99	80.694	Pygocentrus_nattereri
ENSTNIG00000018214	larsb	100	73.836	ENSRNOG00000018304	Lars	99	73.836	Rattus_norvegicus
ENSTNIG00000018214	larsb	94	76.534	ENSRBIG00000043198	LARS	99	76.534	Rhinopithecus_bieti
ENSTNIG00000018214	larsb	90	43.400	YPL160W	CDC60	99	42.948	Saccharomyces_cerevisiae
ENSTNIG00000018214	larsb	100	75.170	ENSSBOG00000026661	LARS	100	77.387	Saimiri_boliviensis_boliviensis
ENSTNIG00000018214	larsb	100	75.232	ENSSHAG00000006084	LARS	99	75.232	Sarcophilus_harrisii
ENSTNIG00000018214	larsb	97	80.752	ENSSFOG00015018117	larsb	90	80.665	Scleropages_formosus
ENSTNIG00000018214	larsb	88	85.864	ENSSMAG00000004078	larsb	97	85.960	Scophthalmus_maximus
ENSTNIG00000018214	larsb	100	87.721	ENSSDUG00000021142	larsb	99	87.637	Seriola_dumerili
ENSTNIG00000018214	larsb	100	87.637	ENSSLDG00000007054	larsb	99	87.553	Seriola_lalandi_dorsalis
ENSTNIG00000018214	larsb	85	62.375	ENSSARG00000013481	LARS	85	62.375	Sorex_araneus
ENSTNIG00000018214	larsb	100	75.783	ENSSPUG00000013805	LARS	99	76.207	Sphenodon_punctatus
ENSTNIG00000018214	larsb	100	87.384	ENSSPAG00000012124	larsb	99	87.300	Stegastes_partitus
ENSTNIG00000018214	larsb	100	72.156	ENSSSCG00000014411	LARS	99	72.156	Sus_scrofa
ENSTNIG00000018214	larsb	100	76.102	ENSTGUG00000000092	-	99	76.102	Taeniopygia_guttata
ENSTNIG00000018214	larsb	100	87.973	ENSTRUG00000005358	larsb	99	87.805	Takifugu_rubripes
ENSTNIG00000018214	larsb	89	70.435	ENSTBEG00000003757	LARS	92	70.435	Tupaia_belangeri
ENSTNIG00000018214	larsb	95	73.417	ENSTTRG00000016712	LARS	95	73.417	Tursiops_truncatus
ENSTNIG00000018214	larsb	94	76.619	ENSUAMG00000019907	LARS	99	76.619	Ursus_americanus
ENSTNIG00000018214	larsb	100	75.424	ENSUMAG00000010585	LARS	99	75.424	Ursus_maritimus
ENSTNIG00000018214	larsb	92	75.292	ENSVPAG00000000557	LARS	92	75.292	Vicugna_pacos
ENSTNIG00000018214	larsb	100	75.508	ENSVVUG00000021124	LARS	99	75.508	Vulpes_vulpes
ENSTNIG00000018214	larsb	100	76.884	ENSXETG00000002320	lars	99	76.884	Xenopus_tropicalis
ENSTNIG00000018214	larsb	100	85.366	ENSXMAG00000001454	larsb	99	85.450	Xiphophorus_maculatus