EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000018319 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2155 bases
Position: chr8:8187163-8189317
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021485	MMR_HSR1	PF01926.23	6.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021720	-	603	-	ENSTNIP00000021485	200 (aa)	-	H3DLT7

Gene Model

Click here to download ENSTNIG00000018319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000018319	-	80	43.636	ENSTNIG00000015000	zgc:101559	70	43.636
ENSTNIG00000018319	-	82	46.951	ENSTNIG00000008717	rab18a	79	46.951
ENSTNIG00000018319	-	88	55.429	ENSTNIG00000016414	rab15	82	55.429
ENSTNIG00000018319	-	84	30.682	ENSTNIG00000006596	dnajc27	64	30.682
ENSTNIG00000018319	-	85	44.828	ENSTNIG00000003679	-	81	44.828
ENSTNIG00000018319	-	94	37.255	ENSTNIG00000016231	rab34a	79	37.255
ENSTNIG00000018319	-	83	45.181	ENSTNIG00000002003	-	82	45.181
ENSTNIG00000018319	-	82	41.667	ENSTNIG00000001956	RAB9A	79	41.667
ENSTNIG00000018319	-	81	33.951	ENSTNIG00000017844	-	86	33.951
ENSTNIG00000018319	-	88	37.430	ENSTNIG00000014604	RAB7A	86	37.430
ENSTNIG00000018319	-	62	30.645	ENSTNIG00000014233	arl3l2	63	30.645
ENSTNIG00000018319	-	79	44.099	ENSTNIG00000016831	RAB41	75	44.099
ENSTNIG00000018319	-	77	36.364	ENSTNIG00000014591	rheb	83	36.364
ENSTNIG00000018319	-	85	39.053	ENSTNIG00000016575	rab23	76	38.674
ENSTNIG00000018319	-	89	47.283	ENSTNIG00000018498	-	81	47.283
ENSTNIG00000018319	-	95	38.144	ENSTNIG00000018267	rab22a	97	38.144
ENSTNIG00000018319	-	81	50.617	ENSTNIG00000008784	-	100	50.617
ENSTNIG00000018319	-	86	37.572	ENSTNIG00000011385	hrasb	90	37.572
ENSTNIG00000018319	-	99	41.206	ENSTNIG00000001043	si:ch211-247i17.1	99	41.206
ENSTNIG00000018319	-	85	49.412	ENSTNIG00000011300	si:dkey-16l2.16	87	47.253
ENSTNIG00000018319	-	86	31.977	ENSTNIG00000017951	rabl2	74	31.977
ENSTNIG00000018319	-	84	36.471	ENSTNIG00000007566	si:ch73-116o1.2	81	36.471
ENSTNIG00000018319	-	59	30.252	ENSTNIG00000001632	-	50	30.252
ENSTNIG00000018319	-	82	37.725	ENSTNIG00000001195	rab9a	83	37.725
ENSTNIG00000018319	-	58	30.769	ENSTNIG00000004344	arl3	62	30.769
ENSTNIG00000018319	-	97	37.500	ENSTNIG00000009039	rab14	95	37.500
ENSTNIG00000018319	-	85	41.081	ENSTNIG00000010125	rab33ba	76	41.081
ENSTNIG00000018319	-	80	42.331	ENSTNIG00000010122	rab33a	70	42.331
ENSTNIG00000018319	-	82	31.902	ENSTNIG00000013137	ran	74	31.902
ENSTNIG00000018319	-	88	37.430	ENSTNIG00000011114	-	86	37.430
ENSTNIG00000018319	-	88	49.718	ENSTNIG00000014859	rab12	71	49.419
ENSTNIG00000018319	-	81	31.792	ENSTNIG00000003649	rasl11a	73	31.792
ENSTNIG00000018319	-	96	35.233	ENSTNIG00000012154	kras	95	35.233
ENSTNIG00000018319	-	86	41.860	ENSTNIG00000011711	rab5c	77	41.860
ENSTNIG00000018319	-	83	44.242	ENSTNIG00000001448	-	98	44.242
ENSTNIG00000018319	-	85	40.782	ENSTNIG00000012343	-	75	40.782
ENSTNIG00000018319	-	79	44.512	ENSTNIG00000005090	rab25a	75	44.512
ENSTNIG00000018319	-	88	43.429	ENSTNIG00000004004	-	96	43.429
ENSTNIG00000018319	-	87	46.821	ENSTNIG00000013184	-	79	46.821
ENSTNIG00000018319	-	94	42.714	ENSTNIG00000013182	-	92	42.714
ENSTNIG00000018319	-	92	44.041	ENSTNIG00000011081	rab11bb	89	44.041
ENSTNIG00000018319	-	85	48.824	ENSTNIG00000006650	RAB19	78	48.824
ENSTNIG00000018319	-	79	44.937	ENSTNIG00000015257	rab6bb	76	44.937
ENSTNIG00000018319	-	79	38.125	ENSTNIG00000016158	rab34b	62	38.125
ENSTNIG00000018319	-	61	30.370	ENSTNIG00000005278	arfrp1	94	30.370
ENSTNIG00000018319	-	84	45.562	ENSTNIG00000003472	rab2a	79	45.562
ENSTNIG00000018319	-	85	46.857	ENSTNIG00000007882	rab18b	84	46.857
ENSTNIG00000018319	-	95	40.104	ENSTNIG00000009196	rab5aa	89	40.104
ENSTNIG00000018319	-	75	31.373	ENSTNIG00000009030	-	80	31.373
ENSTNIG00000018319	-	79	60.127	ENSTNIG00000004511	-	98	60.127
ENSTNIG00000018319	-	61	33.871	ENSTNIG00000006917	si:cabz01085950.1	93	33.871
ENSTNIG00000018319	-	86	54.651	ENSTNIG00000001260	RAB15	81	54.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018319	-	100	95.500	ENSAPOG00000001040	-	100	95.500	Acanthochromis_polyacanthus
ENSTNIG00000018319	-	100	66.667	ENSACIG00000003157	-	100	66.667	Amphilophus_citrinellus
ENSTNIG00000018319	-	100	95.500	ENSAOCG00000015908	-	100	95.500	Amphiprion_ocellaris
ENSTNIG00000018319	-	100	95.500	ENSAPEG00000004121	-	100	95.500	Amphiprion_percula
ENSTNIG00000018319	-	100	90.500	ENSATEG00000023662	-	100	90.500	Anabas_testudineus
ENSTNIG00000018319	-	100	94.000	ENSACLG00000019643	-	100	94.000	Astatotilapia_calliptera
ENSTNIG00000018319	-	100	92.000	ENSCVAG00000022649	-	100	92.000	Cyprinodon_variegatus
ENSTNIG00000018319	-	86	73.837	ENSDARG00000103934	megf8	99	73.837	Danio_rerio
ENSTNIG00000018319	-	100	89.500	ENSGAFG00000014787	-	100	89.500	Gambusia_affinis
ENSTNIG00000018319	-	100	94.000	ENSHBUG00000003728	-	100	94.000	Haplochromis_burtoni
ENSTNIG00000018319	-	100	94.000	ENSMZEG00005015817	-	100	94.000	Maylandia_zebra
ENSTNIG00000018319	-	100	94.000	ENSMMOG00000003924	-	100	94.000	Mola_mola
ENSTNIG00000018319	-	100	93.500	ENSMALG00000020807	-	100	93.500	Monopterus_albus
ENSTNIG00000018319	-	54	91.667	ENSOPRG00000014416	-	100	91.667	Ochotona_princeps
ENSTNIG00000018319	-	100	89.500	ENSORLG00000025395	-	100	89.500	Oryzias_latipes
ENSTNIG00000018319	-	100	89.500	ENSORLG00020009535	-	100	89.500	Oryzias_latipes_hni
ENSTNIG00000018319	-	100	90.000	ENSORLG00015015518	-	100	90.000	Oryzias_latipes_hsok
ENSTNIG00000018319	-	100	88.557	ENSPKIG00000014528	-	100	88.557	Paramormyrops_kingsleyae
ENSTNIG00000018319	-	100	91.000	ENSPFOG00000014418	-	100	91.000	Poecilia_formosa
ENSTNIG00000018319	-	100	91.000	ENSPLAG00000003181	-	100	91.000	Poecilia_latipinna
ENSTNIG00000018319	-	100	91.000	ENSPMEG00000022988	-	100	91.000	Poecilia_mexicana
ENSTNIG00000018319	-	100	91.000	ENSPMEG00000008020	-	100	91.000	Poecilia_mexicana
ENSTNIG00000018319	-	100	93.500	ENSPNYG00000004681	-	100	93.500	Pundamilia_nyererei
ENSTNIG00000018319	-	100	89.000	ENSSFOG00015021754	rab13	100	89.000	Scleropages_formosus
ENSTNIG00000018319	-	100	95.000	ENSSMAG00000016376	-	100	95.000	Scophthalmus_maximus
ENSTNIG00000018319	-	100	67.150	ENSSMAG00000002569	-	100	67.150	Scophthalmus_maximus
ENSTNIG00000018319	-	100	95.500	ENSSDUG00000006307	-	100	95.500	Seriola_dumerili
ENSTNIG00000018319	-	100	95.500	ENSSLDG00000015823	-	100	95.500	Seriola_lalandi_dorsalis
ENSTNIG00000018319	-	100	95.500	ENSSPAG00000022440	-	100	95.500	Stegastes_partitus
ENSTNIG00000018319	-	100	90.000	ENSXMAG00000016094	-	100	90.000	Xiphophorus_maculatus