EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000018384 (Gene tree)
Gene ID
-
Gene Symbol
scrt1b
Alias
zgc:113646
Full Name
scratch family zinc finger 1b
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Minus strand
Length
2837 bases
Position
chr8:7370190-7373026
Accession
ZDB-GENE-050327-72
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000021553zf-C2H2PF00096.261.2e-2514
ENSTNIP00000021553zf-C2H2PF00096.261.2e-2524
ENSTNIP00000021553zf-C2H2PF00096.261.2e-2534
ENSTNIP00000021553zf-C2H2PF00096.261.2e-2544
ENSTNIP00000021553zf-metPF12874.73.4e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000021788-843-ENSTNIP00000021553280 (aa)-H3DM05
Gene Model
Click here to download ENSTNIG00000018384's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018384's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000018384scrt1b5832.927ENSTNIG00000016189zbtb16b5332.927
ENSTNIG00000018384scrt1b5538.571ENSTNIG00000003979-9938.571
ENSTNIG00000018384scrt1b5542.169ENSTNIG00000000320-9742.169
ENSTNIG00000018384scrt1b5338.806ENSTNIG00000000528-9538.806
ENSTNIG00000018384scrt1b5235.514ENSTNIG00000009831-9135.514
ENSTNIG00000018384scrt1b7836.250ENSTNIG00000008242-9936.250
ENSTNIG00000018384scrt1b5734.091ENSTNIG00000002344-9934.091
ENSTNIG00000018384scrt1b5734.091ENSTNIG00000002343-8034.091
ENSTNIG00000018384scrt1b5236.842ENSTNIG00000018984-9836.842
ENSTNIG00000018384scrt1b9536.201ENSTNIG00000003865-9835.842
ENSTNIG00000018384scrt1b5334.906ENSTNIG00000008100-9934.906
ENSTNIG00000018384scrt1b5239.091ENSTNIG00000001159si:dkey-89b17.49739.091
ENSTNIG00000018384scrt1b6844.872ENSTNIG00000005023-9944.872
ENSTNIG00000018384scrt1b9669.424ENSTNIG00000012473scrt29669.424
ENSTNIG00000018384scrt1b5138.393ENSTNIG00000000934-9738.393
ENSTNIG00000018384scrt1b5735.000ENSTNIG00000001164ZNF6289835.000
ENSTNIG00000018384scrt1b5041.071ENSTNIG00000003834gfi1b5341.071
ENSTNIG00000018384scrt1b5236.667ENSTNIG00000008154-7836.667
ENSTNIG00000018384scrt1b5938.961ENSTNIG00000012449zbtb485038.961
ENSTNIG00000018384scrt1b6336.471ENSTNIG00000011367znf710b5336.471
ENSTNIG00000018384scrt1b5834.266ENSTNIG00000005798zbtb16a5234.266
ENSTNIG00000018384scrt1b5142.697ENSTNIG00000005856-9842.697
ENSTNIG00000018384scrt1b5538.406ENSTNIG00000019069-10038.406
ENSTNIG00000018384scrt1b5539.394ENSTNIG00000008200-9939.394
ENSTNIG00000018384scrt1b6437.762ENSTNIG00000011188-8337.762
ENSTNIG00000018384scrt1b5340.426ENSTNIG00000000330-9640.426
ENSTNIG00000018384scrt1b9539.493ENSTNIG00000008504snai29839.493
ENSTNIG00000018384scrt1b5043.750ENSTNIG00000000277-9343.750
ENSTNIG00000018384scrt1b7737.273ENSTNIG00000000073znf6469737.273
ENSTNIG00000018384scrt1b6238.406ENSTNIG00000005479-9838.406
ENSTNIG00000018384scrt1b5235.821ENSTNIG00000001921-6935.821
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000018384scrt1b10095.714ENSAPOG00000009279scrt1b10095.714Acanthochromis_polyacanthus
ENSTNIG00000018384scrt1b9977.273ENSAPOG00000015197-9977.273Acanthochromis_polyacanthus
ENSTNIG00000018384scrt1b9669.091ENSAPOG00000003680scrt29669.091Acanthochromis_polyacanthus
ENSTNIG00000018384scrt1b10091.429ENSACIG00000013613scrt1b10091.429Amphilophus_citrinellus
ENSTNIG00000018384scrt1b9975.333ENSACIG00000006586-9975.333Amphilophus_citrinellus
ENSTNIG00000018384scrt1b9668.000ENSACIG00000012604scrt29668.000Amphilophus_citrinellus
ENSTNIG00000018384scrt1b9656.667ENSACIG00000001296-9656.667Amphilophus_citrinellus
ENSTNIG00000018384scrt1b10095.000ENSAOCG00000003910scrt1b10095.000Amphiprion_ocellaris
ENSTNIG00000018384scrt1b9975.667ENSAOCG00000023304-9975.667Amphiprion_ocellaris
ENSTNIG00000018384scrt1b9669.091ENSAOCG00000021557scrt29669.091Amphiprion_ocellaris
ENSTNIG00000018384scrt1b9669.091ENSAPEG00000022558scrt29669.091Amphiprion_percula
ENSTNIG00000018384scrt1b10095.357ENSAPEG00000000869scrt1b10095.357Amphiprion_percula
ENSTNIG00000018384scrt1b9975.667ENSAPEG00000005677-9975.667Amphiprion_percula
ENSTNIG00000018384scrt1b10093.929ENSATEG00000002302scrt1b10093.929Anabas_testudineus
ENSTNIG00000018384scrt1b9664.286ENSATEG00000023998scrt29664.286Anabas_testudineus
ENSTNIG00000018384scrt1b9976.573ENSATEG00000011660-9976.573Anabas_testudineus
ENSTNIG00000018384scrt1b9653.205ENSATEG00000003195-9653.205Anabas_testudineus
ENSTNIG00000018384scrt1b7675.943ENSACAG00000016109SCRT29475.943Anolis_carolinensis
ENSTNIG00000018384scrt1b10094.643ENSACLG00000007162scrt1b10094.643Astatotilapia_calliptera
ENSTNIG00000018384scrt1b9973.597ENSACLG00000012046-9973.597Astatotilapia_calliptera
ENSTNIG00000018384scrt1b10082.500ENSAMXG00000038085scrt1a10083.274Astyanax_mexicanus
ENSTNIG00000018384scrt1b9880.576ENSAMXG00000042624SCRT19980.576Astyanax_mexicanus
ENSTNIG00000018384scrt1b8273.109ENSAMXG00000034158scrt28673.109Astyanax_mexicanus
ENSTNIG00000018384scrt1b5862.963WBGene00000468ces-16161.677Caenorhabditis_elegans
ENSTNIG00000018384scrt1b8661.355ENSCPBG00000027613SCRT210061.355Chrysemys_picta_bellii
ENSTNIG00000018384scrt1b9982.857ENSCPBG00000018899SCRT19982.857Chrysemys_picta_bellii
ENSTNIG00000018384scrt1b9666.225ENSCSEG00000021542scrt29665.894Cynoglossus_semilaevis
ENSTNIG00000018384scrt1b10093.571ENSCSEG00000008596scrt1b10093.571Cynoglossus_semilaevis
ENSTNIG00000018384scrt1b9875.421ENSCSEG00000014892-9875.421Cynoglossus_semilaevis
ENSTNIG00000018384scrt1b9662.987ENSCVAG00000021038scrt29662.987Cyprinodon_variegatus
ENSTNIG00000018384scrt1b10095.000ENSCVAG00000009561scrt1b10095.000Cyprinodon_variegatus
ENSTNIG00000018384scrt1b9975.667ENSCVAG00000003190-9975.667Cyprinodon_variegatus
ENSTNIG00000018384scrt1b10085.053ENSDARG00000040214scrt1b10085.053Danio_rerio
ENSTNIG00000018384scrt1b10085.765ENSDARG00000100821scrt1a10085.765Danio_rerio
ENSTNIG00000018384scrt1b9664.646ENSELUG00000023883scrt29566.330Esox_lucius
ENSTNIG00000018384scrt1b9985.612ENSELUG00000005435scrt1b9985.612Esox_lucius
ENSTNIG00000018384scrt1b9985.000ENSELUG00000022228scrt1a9985.000Esox_lucius
ENSTNIG00000018384scrt1b8271.429ENSFALG00000005718SCRT29671.429Ficedula_albicollis
ENSTNIG00000018384scrt1b9661.852ENSFDAG00000008733SCRT19661.852Fukomys_damarensis
ENSTNIG00000018384scrt1b9670.545ENSFHEG00000005732scrt29670.545Fundulus_heteroclitus
ENSTNIG00000018384scrt1b10095.714ENSFHEG00000014820scrt1b10095.714Fundulus_heteroclitus
ENSTNIG00000018384scrt1b9976.000ENSFHEG00000009794-9976.000Fundulus_heteroclitus
ENSTNIG00000018384scrt1b9659.091ENSGMOG00000019519scrt29559.091Gadus_morhua
ENSTNIG00000018384scrt1b9991.756ENSGMOG00000000629scrt1b10091.756Gadus_morhua
ENSTNIG00000018384scrt1b5792.742ENSGMOG00000013833-5492.742Gadus_morhua
ENSTNIG00000018384scrt1b9664.576ENSGALG00000028912SCRT29665.074Gallus_gallus
ENSTNIG00000018384scrt1b10094.643ENSGAFG00000007636scrt1b10094.643Gambusia_affinis
ENSTNIG00000018384scrt1b9666.441ENSGAFG00000003093scrt29666.441Gambusia_affinis
ENSTNIG00000018384scrt1b9976.596ENSGAFG00000009650-9976.596Gambusia_affinis
ENSTNIG00000018384scrt1b9973.311ENSGACG00000004072-9973.311Gasterosteus_aculeatus
ENSTNIG00000018384scrt1b9992.115ENSGACG00000008982scrt1b9992.115Gasterosteus_aculeatus
ENSTNIG00000018384scrt1b9664.706ENSGAGG00000020761SCRT29664.706Gopherus_agassizii
ENSTNIG00000018384scrt1b6382.386ENSGAGG00000020760-6882.386Gopherus_agassizii
ENSTNIG00000018384scrt1b9983.094ENSGAGG00000011736SCRT110083.094Gopherus_agassizii
ENSTNIG00000018384scrt1b10094.643ENSHBUG00000016621scrt1b10094.643Haplochromis_burtoni
ENSTNIG00000018384scrt1b9668.364ENSHBUG00000012492scrt29668.364Haplochromis_burtoni
ENSTNIG00000018384scrt1b9976.000ENSHBUG00000019101-9976.000Haplochromis_burtoni
ENSTNIG00000018384scrt1b10091.071ENSHCOG00000016704scrt1b10091.071Hippocampus_comes
ENSTNIG00000018384scrt1b9665.529ENSHCOG00000008116scrt29665.529Hippocampus_comes
ENSTNIG00000018384scrt1b9968.966ENSHCOG00000016179-9969.655Hippocampus_comes
ENSTNIG00000018384scrt1b9985.305ENSIPUG00000004551scrt1a9985.305Ictalurus_punctatus
ENSTNIG00000018384scrt1b9877.818ENSIPUG00000005547-9977.818Ictalurus_punctatus
ENSTNIG00000018384scrt1b5085.106ENSSTOG00000032944SCRT28479.618Ictidomys_tridecemlineatus
ENSTNIG00000018384scrt1b9663.961ENSKMAG00000018087scrt29663.961Kryptolebias_marmoratus
ENSTNIG00000018384scrt1b10095.357ENSKMAG00000005484scrt1b10095.357Kryptolebias_marmoratus
ENSTNIG00000018384scrt1b9974.000ENSKMAG00000009489-9975.667Kryptolebias_marmoratus
ENSTNIG00000018384scrt1b9663.754ENSLBEG00000015419scrt29664.078Labrus_bergylta
ENSTNIG00000018384scrt1b9973.490ENSLBEG00000023388-9974.161Labrus_bergylta
ENSTNIG00000018384scrt1b10083.274ENSLACG00000003588SCRT19983.274Latimeria_chalumnae
ENSTNIG00000018384scrt1b9654.870ENSLOCG00000002246scrt29754.870Lepisosteus_oculatus
ENSTNIG00000018384scrt1b10086.121ENSLOCG00000007573scrt1b10086.121Lepisosteus_oculatus
ENSTNIG00000018384scrt1b9694.074ENSMFAG00000035496SCRT17783.030Macaca_fascicularis
ENSTNIG00000018384scrt1b10093.929ENSMAMG00000011698scrt1b10093.929Mastacembelus_armatus
ENSTNIG00000018384scrt1b9663.636ENSMAMG00000001291scrt29663.636Mastacembelus_armatus
ENSTNIG00000018384scrt1b10094.643ENSMZEG00005005627scrt1b10094.643Maylandia_zebra
ENSTNIG00000018384scrt1b9976.000ENSMZEG00005026702-9976.000Maylandia_zebra
ENSTNIG00000018384scrt1b9668.364ENSMZEG00005026445scrt29668.364Maylandia_zebra
ENSTNIG00000018384scrt1b8270.000ENSMGAG00000016579SCRT29670.000Meleagris_gallopavo
ENSTNIG00000018384scrt1b9975.000ENSMMOG00000018345-9975.000Mola_mola
ENSTNIG00000018384scrt1b10095.714ENSMMOG00000003327scrt1b10095.714Mola_mola
ENSTNIG00000018384scrt1b9664.590ENSMMOG00000009272scrt29665.246Mola_mola
ENSTNIG00000018384scrt1b10093.929ENSMALG00000012704scrt1b10093.929Monopterus_albus
ENSTNIG00000018384scrt1b9667.391ENSMALG00000013656scrt29667.391Monopterus_albus
ENSTNIG00000018384scrt1b6469.189ENSNGAG00000020815Scrt29467.692Nannospalax_galili
ENSTNIG00000018384scrt1b10090.000ENSNBRG00000013983scrt1b10090.000Neolamprologus_brichardi
ENSTNIG00000018384scrt1b9668.000ENSNBRG00000007221scrt29668.000Neolamprologus_brichardi
ENSTNIG00000018384scrt1b9975.667ENSNBRG00000014882-9975.667Neolamprologus_brichardi
ENSTNIG00000018384scrt1b9663.636ENSONIG00000016758scrt29663.636Oreochromis_niloticus
ENSTNIG00000018384scrt1b9659.783ENSONIG00000003152-9659.783Oreochromis_niloticus
ENSTNIG00000018384scrt1b9672.459ENSONIG00000019809-9972.459Oreochromis_niloticus
ENSTNIG00000018384scrt1b10093.929ENSONIG00000006007scrt1b10093.929Oreochromis_niloticus
ENSTNIG00000018384scrt1b10094.286ENSORLG00000025651scrt1b10094.286Oryzias_latipes
ENSTNIG00000018384scrt1b9973.754ENSORLG00000022825-9973.754Oryzias_latipes
ENSTNIG00000018384scrt1b9664.286ENSORLG00000024051scrt29664.286Oryzias_latipes
ENSTNIG00000018384scrt1b9664.286ENSORLG00020011478scrt29664.286Oryzias_latipes_hni
ENSTNIG00000018384scrt1b10094.286ENSORLG00020012967scrt1b10094.286Oryzias_latipes_hni
ENSTNIG00000018384scrt1b10094.286ENSORLG00015019165scrt1b10094.286Oryzias_latipes_hsok
ENSTNIG00000018384scrt1b9664.286ENSORLG00015005524scrt29664.286Oryzias_latipes_hsok
ENSTNIG00000018384scrt1b9974.086ENSORLG00015010104-9974.086Oryzias_latipes_hsok
ENSTNIG00000018384scrt1b9663.636ENSOMEG00000002661scrt29663.636Oryzias_melastigma
ENSTNIG00000018384scrt1b9975.920ENSOMEG00000000286-9975.920Oryzias_melastigma
ENSTNIG00000018384scrt1b10094.286ENSOMEG00000003925scrt1b10094.286Oryzias_melastigma
ENSTNIG00000018384scrt1b10083.630ENSPKIG00000020085scrt1a10083.630Paramormyrops_kingsleyae
ENSTNIG00000018384scrt1b10085.053ENSPKIG00000022303SCRT110085.053Paramormyrops_kingsleyae
ENSTNIG00000018384scrt1b9669.343ENSPMGG00000016561scrt29669.343Periophthalmus_magnuspinnatus
ENSTNIG00000018384scrt1b10089.286ENSPMGG00000002260scrt1b10089.286Periophthalmus_magnuspinnatus
ENSTNIG00000018384scrt1b9973.898ENSPMGG00000021402-9973.898Periophthalmus_magnuspinnatus
ENSTNIG00000018384scrt1b9663.312ENSPFOG00000007738scrt29663.312Poecilia_formosa
ENSTNIG00000018384scrt1b10094.643ENSPFOG00000017719scrt1b10094.643Poecilia_formosa
ENSTNIG00000018384scrt1b9975.758ENSPFOG00000005616-9975.758Poecilia_formosa
ENSTNIG00000018384scrt1b9670.758ENSPLAG00000005765scrt29670.758Poecilia_latipinna
ENSTNIG00000018384scrt1b10094.643ENSPLAG00000009876scrt1b10094.643Poecilia_latipinna
ENSTNIG00000018384scrt1b9975.758ENSPLAG00000011718-9975.758Poecilia_latipinna
ENSTNIG00000018384scrt1b9975.758ENSPMEG00000011706-9975.758Poecilia_mexicana
ENSTNIG00000018384scrt1b10094.643ENSPMEG00000013274scrt1b10094.643Poecilia_mexicana
ENSTNIG00000018384scrt1b9670.758ENSPMEG00000001538scrt29670.758Poecilia_mexicana
ENSTNIG00000018384scrt1b10094.643ENSPREG00000018985scrt1b10094.643Poecilia_reticulata
ENSTNIG00000018384scrt1b9663.312ENSPREG00000001147scrt29663.312Poecilia_reticulata
ENSTNIG00000018384scrt1b9975.084ENSPREG00000012166-9975.084Poecilia_reticulata
ENSTNIG00000018384scrt1b9668.364ENSPNYG00000013109scrt29668.364Pundamilia_nyererei
ENSTNIG00000018384scrt1b10094.643ENSPNYG00000017733scrt1b10094.643Pundamilia_nyererei
ENSTNIG00000018384scrt1b9976.000ENSPNYG00000008865-9976.000Pundamilia_nyererei
ENSTNIG00000018384scrt1b10084.342ENSPNAG00000017415scrt1a10084.342Pygocentrus_nattereri
ENSTNIG00000018384scrt1b9882.310ENSPNAG00000027880-9982.310Pygocentrus_nattereri
ENSTNIG00000018384scrt1b10085.053ENSSFOG00015001195SCRT110085.053Scleropages_formosus
ENSTNIG00000018384scrt1b9973.510ENSSMAG00000005122-9973.510Scophthalmus_maximus
ENSTNIG00000018384scrt1b9992.115ENSSMAG00000019207scrt1b9992.115Scophthalmus_maximus
ENSTNIG00000018384scrt1b9976.000ENSSDUG00000013215-9976.000Seriola_dumerili
ENSTNIG00000018384scrt1b10095.000ENSSDUG00000007752scrt1b10095.000Seriola_dumerili
ENSTNIG00000018384scrt1b9865.101ENSSDUG00000001637scrt29665.101Seriola_dumerili
ENSTNIG00000018384scrt1b9663.636ENSSLDG00000013565scrt29663.636Seriola_lalandi_dorsalis
ENSTNIG00000018384scrt1b9976.000ENSSLDG00000016454-9976.000Seriola_lalandi_dorsalis
ENSTNIG00000018384scrt1b10095.000ENSSLDG00000017166scrt1b10095.000Seriola_lalandi_dorsalis
ENSTNIG00000018384scrt1b9665.926ENSSPUG00000018637SCRT29665.926Sphenodon_punctatus
ENSTNIG00000018384scrt1b10095.000ENSSPAG00000002200scrt1b10095.000Stegastes_partitus
ENSTNIG00000018384scrt1b9974.333ENSSPAG00000006788-9976.000Stegastes_partitus
ENSTNIG00000018384scrt1b9668.727ENSSPAG00000014018scrt29668.727Stegastes_partitus
ENSTNIG00000018384scrt1b8271.304ENSTGUG00000006801SCRT29971.304Taeniopygia_guttata
ENSTNIG00000018384scrt1b9666.897ENSTRUG00000007620scrt29666.897Takifugu_rubripes
ENSTNIG00000018384scrt1b9899.273ENSTRUG00000011637scrt1b9999.273Takifugu_rubripes
ENSTNIG00000018384scrt1b9974.832ENSTRUG00000012719-9974.832Takifugu_rubripes
ENSTNIG00000018384scrt1b8677.459ENSTRUG00000019558-8177.459Takifugu_rubripes
ENSTNIG00000018384scrt1b9666.780ENSXCOG00000014367scrt29666.780Xiphophorus_couchianus
ENSTNIG00000018384scrt1b9974.823ENSXCOG00000019861-9974.823Xiphophorus_couchianus
ENSTNIG00000018384scrt1b10094.643ENSXCOG00000019675scrt1b10094.643Xiphophorus_couchianus
ENSTNIG00000018384scrt1b10094.643ENSXMAG00000027885scrt1b10094.643Xiphophorus_maculatus
ENSTNIG00000018384scrt1b9663.636ENSXMAG00000028567scrt29663.636Xiphophorus_maculatus
ENSTNIG00000018384scrt1b9975.421ENSXMAG00000015353-9975.421Xiphophorus_maculatus

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