EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000018398 (Gene tree)
Gene ID
-
Gene Symbol
atxn1b
Alias
atxn1|atxn1a
Full Name
ataxin 1b
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Plus strand
Length
2514 bases
Position
chr8:7105564-7108077
Accession
ZDB-GENE-061218-2
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000021567AXHPF08517.125.9e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000021802-2232-ENSTNIP00000021567744 (aa)-H3DM19
Gene Model
Click here to download ENSTNIG00000018398's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018398's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000018398atxn1b10040.433ENSTNIG00000005089atxn1a10041.546
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000018398atxn1b10038.811ENSG00000124788ATXN110038.811Homo_sapiens
ENSTNIG00000018398atxn1b9974.015ENSAPOG00000005003atxn1b9974.631Acanthochromis_polyacanthus
ENSTNIG00000018398atxn1b10040.728ENSAPOG00000018662atxn1a10041.032Acanthochromis_polyacanthus
ENSTNIG00000018398atxn1b10040.260ENSAMEG00000004299ATXN110040.142Ailuropoda_melanoleuca
ENSTNIG00000018398atxn1b9075.758ENSACIG00000016088atxn1a10039.420Amphilophus_citrinellus
ENSTNIG00000018398atxn1b9971.791ENSACIG00000014661atxn1b9872.037Amphilophus_citrinellus
ENSTNIG00000018398atxn1b10040.234ENSAOCG00000015796atxn1a10040.468Amphiprion_ocellaris
ENSTNIG00000018398atxn1b9974.444ENSAOCG00000019715atxn1b9975.062Amphiprion_ocellaris
ENSTNIG00000018398atxn1b10040.351ENSAPEG00000011313atxn1a10041.005Amphiprion_percula
ENSTNIG00000018398atxn1b9974.321ENSAPEG00000022436atxn1b9974.938Amphiprion_percula
ENSTNIG00000018398atxn1b9972.384ENSATEG00000002982atxn1b9973.171Anabas_testudineus
ENSTNIG00000018398atxn1b10039.551ENSATEG00000013601atxn1a10040.235Anabas_testudineus
ENSTNIG00000018398atxn1b10039.387ENSACAG00000003919ATXN110039.623Anolis_carolinensis
ENSTNIG00000018398atxn1b9939.928ENSANAG00000025206-9540.167Aotus_nancymaae
ENSTNIG00000018398atxn1b8037.390ENSANAG00000025424-9637.335Aotus_nancymaae
ENSTNIG00000018398atxn1b9971.898ENSACLG00000005697atxn1b9972.141Astatotilapia_calliptera
ENSTNIG00000018398atxn1b10040.518ENSACLG00000015429atxn1a10041.011Astatotilapia_calliptera
ENSTNIG00000018398atxn1b9940.440ENSAMXG00000017432atxn1b9841.251Astyanax_mexicanus
ENSTNIG00000018398atxn1b10041.908ENSAMXG00000042368atxn1a10043.985Astyanax_mexicanus
ENSTNIG00000018398atxn1b10038.590ENSBTAG00000019675ATXN110039.786Bos_taurus
ENSTNIG00000018398atxn1b9939.474ENSCJAG00000006563ATXN19339.928Callithrix_jacchus
ENSTNIG00000018398atxn1b10039.858ENSCAFG00000009934ATXN110040.166Canis_familiaris
ENSTNIG00000018398atxn1b9939.532ENSCAFG00020012647ATXN19539.766Canis_lupus_dingo
ENSTNIG00000018398atxn1b10038.232ENSCHIG00000018697ATXN110039.881Capra_hircus
ENSTNIG00000018398atxn1b6552.769ENSTSYG00000000858ATXN19952.443Carlito_syrichta
ENSTNIG00000018398atxn1b10040.047ENSCAPG00000013095ATXN110040.850Cavia_aperea
ENSTNIG00000018398atxn1b10040.428ENSCPOG00000022869ATXN110041.240Cavia_porcellus
ENSTNIG00000018398atxn1b10039.905ENSCCAG00000018590ATXN110040.143Cebus_capucinus
ENSTNIG00000018398atxn1b10039.620ENSCATG00000042777ATXN110039.739Cercocebus_atys
ENSTNIG00000018398atxn1b10040.838ENSCLAG00000002212ATXN110041.050Chinchilla_lanigera
ENSTNIG00000018398atxn1b10039.715ENSCSAG00000007589ATXN110039.834Chlorocebus_sabaeus
ENSTNIG00000018398atxn1b10040.719ENSCPBG00000022373ATXN110040.838Chrysemys_picta_bellii
ENSTNIG00000018398atxn1b10039.785ENSCANG00000033673ATXN110039.643Colobus_angolensis_palliatus
ENSTNIG00000018398atxn1b10040.165ENSCGRG00001022108Atxn110040.165Cricetulus_griseus_chok1gshd
ENSTNIG00000018398atxn1b10040.547ENSCGRG00000014084Atxn110040.547Cricetulus_griseus_crigri
ENSTNIG00000018398atxn1b9969.554ENSCSEG00000004666atxn1b9970.079Cynoglossus_semilaevis
ENSTNIG00000018398atxn1b10037.399ENSCSEG00000017647atxn1a10038.993Cynoglossus_semilaevis
ENSTNIG00000018398atxn1b10039.062ENSCVAG00000023240atxn1a10039.068Cyprinodon_variegatus
ENSTNIG00000018398atxn1b9969.512ENSCVAG00000010945atxn1b9969.512Cyprinodon_variegatus
ENSTNIG00000018398atxn1b9941.600ENSDARG00000060862atxn1b9941.913Danio_rerio
ENSTNIG00000018398atxn1b10041.383ENSDARG00000061687atxn1a10042.344Danio_rerio
ENSTNIG00000018398atxn1b8047.126ENSDNOG00000048471ATXN19448.276Dasypus_novemcinctus
ENSTNIG00000018398atxn1b10039.277ENSDORG00000005940Atxn110039.440Dipodomys_ordii
ENSTNIG00000018398atxn1b8650.000ENSETEG00000003815ATXN18751.705Echinops_telfairi
ENSTNIG00000018398atxn1b10039.340ENSEASG00005011799ATXN110039.694Equus_asinus_asinus
ENSTNIG00000018398atxn1b10039.905ENSECAG00000009251ATXN110040.000Equus_caballus
ENSTNIG00000018398atxn1b10039.647ENSEEUG00000007120ATXN110039.765Erinaceus_europaeus
ENSTNIG00000018398atxn1b9472.340ENSELUG00000001311atxn1b7572.340Esox_lucius
ENSTNIG00000018398atxn1b9936.866ENSELUG00000003691atxn1a9638.699Esox_lucius
ENSTNIG00000018398atxn1b10040.644ENSFCAG00000011298ATXN110040.952Felis_catus
ENSTNIG00000018398atxn1b10040.855ENSFALG00000013400ATXN110040.974Ficedula_albicollis
ENSTNIG00000018398atxn1b8849.377ENSFDAG00000020905ATXN110038.826Fukomys_damarensis
ENSTNIG00000018398atxn1b9969.221ENSFHEG00000017226atxn1b9969.878Fundulus_heteroclitus
ENSTNIG00000018398atxn1b10038.515ENSFHEG00000019419atxn1a10039.344Fundulus_heteroclitus
ENSTNIG00000018398atxn1b9960.626ENSGMOG00000013508atxn1b9960.756Gadus_morhua
ENSTNIG00000018398atxn1b10041.978ENSGALG00000012709ATXN110042.099Gallus_gallus
ENSTNIG00000018398atxn1b10038.371ENSGAFG00000010544atxn1a10039.001Gambusia_affinis
ENSTNIG00000018398atxn1b9968.978ENSGAFG00000007295atxn1b9970.560Gambusia_affinis
ENSTNIG00000018398atxn1b9972.836ENSGACG00000008747atxn1b9972.836Gasterosteus_aculeatus
ENSTNIG00000018398atxn1b10039.435ENSGACG00000003472atxn1a10039.409Gasterosteus_aculeatus
ENSTNIG00000018398atxn1b10040.550ENSGAGG00000006868ATXN110040.550Gopherus_agassizii
ENSTNIG00000018398atxn1b10039.059ENSGGOG00000004169ATXN110039.059Gorilla_gorilla
ENSTNIG00000018398atxn1b9972.019ENSHBUG00000016081atxn1b9972.263Haplochromis_burtoni
ENSTNIG00000018398atxn1b10040.400ENSHBUG00000002508atxn1a10040.893Haplochromis_burtoni
ENSTNIG00000018398atxn1b10040.882ENSHGLG00000009360ATXN110040.882Heterocephalus_glaber_female
ENSTNIG00000018398atxn1b10040.882ENSHGLG00100003038ATXN110040.882Heterocephalus_glaber_male
ENSTNIG00000018398atxn1b10069.180ENSHCOG00000014835atxn1b9970.106Hippocampus_comes
ENSTNIG00000018398atxn1b8841.391ENSHCOG00000019032atxn1a9441.594Hippocampus_comes
ENSTNIG00000018398atxn1b9942.506ENSIPUG00000002088atxn1b9942.556Ictalurus_punctatus
ENSTNIG00000018398atxn1b10042.770ENSIPUG00000001402atxn110042.892Ictalurus_punctatus
ENSTNIG00000018398atxn1b10040.476ENSSTOG00000025423ATXN110040.807Ictidomys_tridecemlineatus
ENSTNIG00000018398atxn1b10039.904ENSJJAG00000000377Atxn110039.904Jaculus_jaculus
ENSTNIG00000018398atxn1b10037.939ENSKMAG00000007216atxn1a10039.252Kryptolebias_marmoratus
ENSTNIG00000018398atxn1b9971.149ENSKMAG00000013507atxn1b9971.883Kryptolebias_marmoratus
ENSTNIG00000018398atxn1b10038.717ENSLBEG00000024388atxn1a10039.741Labrus_bergylta
ENSTNIG00000018398atxn1b10073.976ENSLBEG00000024264atxn1b9974.373Labrus_bergylta
ENSTNIG00000018398atxn1b10040.754ENSLACG00000005371ATXN110040.754Latimeria_chalumnae
ENSTNIG00000018398atxn1b9460.606ENSLOCG00000002910atxn1a9160.606Lepisosteus_oculatus
ENSTNIG00000018398atxn1b10040.120ENSLAFG00000015231ATXN110040.241Loxodonta_africana
ENSTNIG00000018398atxn1b10039.527ENSMFAG00000032779ATXN110039.645Macaca_fascicularis
ENSTNIG00000018398atxn1b10039.763ENSMMUG00000002940ATXN110039.882Macaca_mulatta
ENSTNIG00000018398atxn1b10039.620ENSMNEG00000036667ATXN110039.739Macaca_nemestrina
ENSTNIG00000018398atxn1b7442.857ENSMLEG00000040480ATXN19341.732Mandrillus_leucophaeus
ENSTNIG00000018398atxn1b9971.618ENSMAMG00000011503atxn1b9971.618Mastacembelus_armatus
ENSTNIG00000018398atxn1b9272.340ENSMAMG00000014004atxn1a10040.211Mastacembelus_armatus
ENSTNIG00000018398atxn1b10040.518ENSMZEG00005003602atxn1a10041.011Maylandia_zebra
ENSTNIG00000018398atxn1b9971.898ENSMZEG00005015064atxn1b9972.141Maylandia_zebra
ENSTNIG00000018398atxn1b10041.084ENSMGAG00000003028ATXN110041.205Meleagris_gallopavo
ENSTNIG00000018398atxn1b10040.947ENSMAUG00000011491Atxn110040.947Mesocricetus_auratus
ENSTNIG00000018398atxn1b10039.809ENSMICG00000011875ATXN110040.048Microcebus_murinus
ENSTNIG00000018398atxn1b10040.736ENSMOCG00000001527Atxn110040.736Microtus_ochrogaster
ENSTNIG00000018398atxn1b10039.976ENSMMOG00000018593atxn1a10040.824Mola_mola
ENSTNIG00000018398atxn1b9974.899ENSMMOG00000002884atxn1b9975.034Mola_mola
ENSTNIG00000018398atxn1b10039.718ENSMODG00000010827ATXN110039.718Monodelphis_domestica
ENSTNIG00000018398atxn1b9973.907ENSMALG00000012137atxn1b9973.907Monopterus_albus
ENSTNIG00000018398atxn1b10040.330ENSMALG00000005209atxn1a10040.749Monopterus_albus
ENSTNIG00000018398atxn1b10039.905MGP_CAROLIEiJ_G0018479Atxn110040.024Mus_caroli
ENSTNIG00000018398atxn1b10039.477ENSMUSG00000046876Atxn110039.596Mus_musculus
ENSTNIG00000018398atxn1b10039.881MGP_PahariEiJ_G0019546Atxn110039.881Mus_pahari
ENSTNIG00000018398atxn1b10039.596MGP_SPRETEiJ_G0019357Atxn110039.596Mus_spretus
ENSTNIG00000018398atxn1b10039.929ENSMPUG00000005398ATXN110039.929Mustela_putorius_furo
ENSTNIG00000018398atxn1b10041.354ENSMLUG00000000896ATXN110041.354Myotis_lucifugus
ENSTNIG00000018398atxn1b10040.261ENSNGAG00000020481Atxn110039.692Nannospalax_galili
ENSTNIG00000018398atxn1b9975.834ENSNBRG00000014776atxn1b9876.064Neolamprologus_brichardi
ENSTNIG00000018398atxn1b10040.237ENSNBRG00000013216atxn1a10040.920Neolamprologus_brichardi
ENSTNIG00000018398atxn1b10039.620ENSNLEG00000001064ATXN110039.739Nomascus_leucogenys
ENSTNIG00000018398atxn1b9938.690ENSMEUG00000014680ATXN19638.690Notamacropus_eugenii
ENSTNIG00000018398atxn1b10038.778ENSOPRG00000004813ATXN110038.895Ochotona_princeps
ENSTNIG00000018398atxn1b10039.905ENSODEG00000006297ATXN110040.024Octodon_degus
ENSTNIG00000018398atxn1b9975.690ENSONIG00000003094atxn1b9976.084Oreochromis_niloticus
ENSTNIG00000018398atxn1b9034.470ENSOANG00000011866ATXN19635.393Ornithorhynchus_anatinus
ENSTNIG00000018398atxn1b10039.809ENSOCUG00000015360ATXN110039.928Oryctolagus_cuniculus
ENSTNIG00000018398atxn1b9969.146ENSORLG00000008288atxn1b9969.268Oryzias_latipes
ENSTNIG00000018398atxn1b10037.902ENSORLG00000013003atxn1a9937.902Oryzias_latipes
ENSTNIG00000018398atxn1b10037.306ENSORLG00020006722atxn1a9937.306Oryzias_latipes_hni
ENSTNIG00000018398atxn1b9969.306ENSORLG00020013514atxn1b9969.428Oryzias_latipes_hni
ENSTNIG00000018398atxn1b9968.780ENSORLG00015019876atxn1b9968.902Oryzias_latipes_hsok
ENSTNIG00000018398atxn1b10037.931ENSORLG00015014668atxn1a9937.931Oryzias_latipes_hsok
ENSTNIG00000018398atxn1b9970.624ENSOMEG00000003259atxn1b9970.379Oryzias_melastigma
ENSTNIG00000018398atxn1b10037.173ENSOMEG00000012883atxn1a9838.270Oryzias_melastigma
ENSTNIG00000018398atxn1b9939.762ENSOGAG00000028623ATXN110039.881Otolemur_garnettii
ENSTNIG00000018398atxn1b6842.681ENSOARG00000012141ATXN18041.586Ovis_aries
ENSTNIG00000018398atxn1b10038.947ENSPPAG00000028993ATXN110038.947Pan_paniscus
ENSTNIG00000018398atxn1b10043.551ENSPPRG00000004547ATXN110043.189Panthera_pardus
ENSTNIG00000018398atxn1b10039.085ENSPTRG00000039250ATXN110039.085Pan_troglodytes
ENSTNIG00000018398atxn1b9939.667ENSPANG00000024249ATXN19939.762Papio_anubis
ENSTNIG00000018398atxn1b10044.351ENSPKIG00000003054atxn1a10044.832Paramormyrops_kingsleyae
ENSTNIG00000018398atxn1b10044.405ENSPKIG00000018323atxn1b10045.520Paramormyrops_kingsleyae
ENSTNIG00000018398atxn1b7737.405ENSPSIG00000007158ATXN19237.557Pelodiscus_sinensis
ENSTNIG00000018398atxn1b9968.085ENSPMGG00000013610atxn1b9968.484Periophthalmus_magnuspinnatus
ENSTNIG00000018398atxn1b8343.038ENSPMGG00000022926atxn1a8543.038Periophthalmus_magnuspinnatus
ENSTNIG00000018398atxn1b10040.378ENSPEMG00000014930Atxn110040.378Peromyscus_maniculatus_bairdii
ENSTNIG00000018398atxn1b10040.237ENSPCIG00000019413ATXN110040.237Phascolarctos_cinereus
ENSTNIG00000018398atxn1b10038.609ENSPFOG00000014422atxn1a10039.094Poecilia_formosa
ENSTNIG00000018398atxn1b10037.755ENSPLAG00000018978atxn1a10038.861Poecilia_latipinna
ENSTNIG00000018398atxn1b9970.872ENSPLAG00000018703atxn1b9970.803Poecilia_latipinna
ENSTNIG00000018398atxn1b10039.068ENSPMEG00000002647atxn1a10039.192Poecilia_mexicana
ENSTNIG00000018398atxn1b9971.271ENSPMEG00000023723atxn1b9971.271Poecilia_mexicana
ENSTNIG00000018398atxn1b8538.968ENSPREG00000008333atxn1a10038.298Poecilia_reticulata
ENSTNIG00000018398atxn1b9971.353ENSPREG00000020308atxn1b9871.788Poecilia_reticulata
ENSTNIG00000018398atxn1b10038.993ENSPPYG00000016254ATXN110038.993Pongo_abelii
ENSTNIG00000018398atxn1b6453.975ENSPCAG00000008196ATXN16753.556Procavia_capensis
ENSTNIG00000018398atxn1b10040.286ENSPCOG00000013612ATXN110040.524Propithecus_coquereli
ENSTNIG00000018398atxn1b8942.190ENSPVAG00000016937ATXN19637.292Pteropus_vampyrus
ENSTNIG00000018398atxn1b10040.283ENSPNYG00000011920atxn1a10040.776Pundamilia_nyererei
ENSTNIG00000018398atxn1b9975.968ENSPNYG00000017095atxn1b9876.197Pundamilia_nyererei
ENSTNIG00000018398atxn1b9942.136ENSPNAG00000001226atxn1b9942.136Pygocentrus_nattereri
ENSTNIG00000018398atxn1b10043.442ENSPNAG00000010587atxn1a10043.654Pygocentrus_nattereri
ENSTNIG00000018398atxn1b10039.667ENSRNOG00000016998Atxn110039.667Rattus_norvegicus
ENSTNIG00000018398atxn1b10039.433ENSRBIG00000028213ATXN110039.433Rhinopithecus_bieti
ENSTNIG00000018398atxn1b10039.667ENSRROG00000032751ATXN110039.667Rhinopithecus_roxellana
ENSTNIG00000018398atxn1b10039.786ENSSBOG00000017381-10040.024Saimiri_boliviensis_boliviensis
ENSTNIG00000018398atxn1b7934.509ENSSBOG00000030307-9134.509Saimiri_boliviensis_boliviensis
ENSTNIG00000018398atxn1b10042.755ENSSFOG00015000179atxn1b10043.587Scleropages_formosus
ENSTNIG00000018398atxn1b10042.432ENSSFOG00015005189atxn110043.313Scleropages_formosus
ENSTNIG00000018398atxn1b9971.567ENSSMAG00000019621atxn1b9971.567Scophthalmus_maximus
ENSTNIG00000018398atxn1b9937.919ENSSMAG00000007731atxn1a9438.915Scophthalmus_maximus
ENSTNIG00000018398atxn1b10041.224ENSSDUG00000011376atxn1a10041.379Seriola_dumerili
ENSTNIG00000018398atxn1b9974.939ENSSDUG00000006990atxn1b9974.939Seriola_dumerili
ENSTNIG00000018398atxn1b10041.109ENSSLDG00000013505atxn1a10041.264Seriola_lalandi_dorsalis
ENSTNIG00000018398atxn1b9974.696ENSSLDG00000016306atxn1b9974.696Seriola_lalandi_dorsalis
ENSTNIG00000018398atxn1b10040.408ENSSPUG00000016650ATXN110040.528Sphenodon_punctatus
ENSTNIG00000018398atxn1b9977.704ENSSPAG00000003388atxn1b9978.628Stegastes_partitus
ENSTNIG00000018398atxn1b10040.070ENSSPAG00000019849atxn1a10041.067Stegastes_partitus
ENSTNIG00000018398atxn1b10038.934ENSSSCG00000001065ATXN110039.443Sus_scrofa
ENSTNIG00000018398atxn1b10038.902ENSTGUG00000005986ATXN110039.021Taeniopygia_guttata
ENSTNIG00000018398atxn1b6944.082ENSTRUG00000014645atxn1a10041.379Takifugu_rubripes
ENSTNIG00000018398atxn1b9983.875ENSTRUG00000024789atxn1b9983.875Takifugu_rubripes
ENSTNIG00000018398atxn1b9939.667ENSTTRG00000014678ATXN19640.048Tursiops_truncatus
ENSTNIG00000018398atxn1b10040.024ENSUAMG00000004064ATXN110039.905Ursus_americanus
ENSTNIG00000018398atxn1b5346.222ENSUMAG00000017635-9246.102Ursus_maritimus
ENSTNIG00000018398atxn1b10039.510ENSVVUG00000003386ATXN110039.696Vulpes_vulpes
ENSTNIG00000018398atxn1b10039.051ENSXETG00000014184atxn110039.051Xenopus_tropicalis
ENSTNIG00000018398atxn1b9971.105ENSXCOG00000019714atxn1b9872.170Xiphophorus_couchianus
ENSTNIG00000018398atxn1b10040.173ENSXCOG00000020061atxn1a10040.541Xiphophorus_couchianus
ENSTNIG00000018398atxn1b9970.073ENSXMAG00000014270atxn1b9970.925Xiphophorus_maculatus
ENSTNIG00000018398atxn1b9169.565ENSXMAG00000003615atxn1a10039.362Xiphophorus_maculatus

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