EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000018483 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2744 bases
Position: chr19:3998622-4001365
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021657	zf-C2H2	PF00096.26	3.8e-47	1	8
ENSTNIP00000021657	zf-C2H2	PF00096.26	3.8e-47	2	8
ENSTNIP00000021657	zf-C2H2	PF00096.26	3.8e-47	3	8
ENSTNIP00000021657	zf-C2H2	PF00096.26	3.8e-47	4	8
ENSTNIP00000021657	zf-C2H2	PF00096.26	3.8e-47	5	8
ENSTNIP00000021657	zf-C2H2	PF00096.26	3.8e-47	6	8
ENSTNIP00000021657	zf-C2H2	PF00096.26	3.8e-47	7	8
ENSTNIP00000021657	zf-C2H2	PF00096.26	3.8e-47	8	8
ENSTNIP00000021657	zf-met	PF12874.7	6e-11	1	3
ENSTNIP00000021657	zf-met	PF12874.7	6e-11	2	3
ENSTNIP00000021657	zf-met	PF12874.7	6e-11	3	3
ENSTNIP00000021657	zf-C2H2_jaz	PF12171.8	9.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021892	-	2331	-	ENSTNIP00000021657	776 (aa)	-	H3DMA9

Gene Model

Click here to download ENSTNIG00000018483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000018483	-	50	40.796	ENSTNIG00000018984	-	99	41.118
ENSTNIG00000018483	-	50	38.387	ENSTNIG00000001164	ZNF628	100	38.387
ENSTNIG00000018483	-	51	34.921	ENSTNIG00000019069	-	99	35.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018483	-	85	75.110	ENSAPOG00000010280	-	86	75.296	Acanthochromis_polyacanthus
ENSTNIG00000018483	-	67	89.706	ENSACIG00000017683	-	79	92.241	Amphilophus_citrinellus
ENSTNIG00000018483	-	85	74.706	ENSAOCG00000011282	-	86	75.037	Amphiprion_ocellaris
ENSTNIG00000018483	-	51	37.791	ENSAPEG00000001546	-	86	45.378	Amphiprion_percula
ENSTNIG00000018483	-	78	71.498	ENSAPEG00000019106	-	97	73.026	Amphiprion_percula
ENSTNIG00000018483	-	71	72.487	ENSATEG00000013871	-	96	72.968	Anabas_testudineus
ENSTNIG00000018483	-	52	41.250	ENSACLG00000020610	-	66	41.250	Astatotilapia_calliptera
ENSTNIG00000018483	-	71	73.239	ENSACLG00000000102	-	99	71.605	Astatotilapia_calliptera
ENSTNIG00000018483	-	85	71.618	ENSCVAG00000007035	-	86	71.598	Cyprinodon_variegatus
ENSTNIG00000018483	-	55	40.000	ENSCVAG00000012399	-	88	40.291	Cyprinodon_variegatus
ENSTNIG00000018483	-	52	38.372	ENSCVAG00000009747	-	54	38.372	Cyprinodon_variegatus
ENSTNIG00000018483	-	62	42.342	ENSCVAG00000012302	-	86	42.342	Cyprinodon_variegatus
ENSTNIG00000018483	-	52	35.882	ENSFHEG00000013058	-	64	33.446	Fundulus_heteroclitus
ENSTNIG00000018483	-	50	37.374	ENSFHEG00000013487	-	66	37.374	Fundulus_heteroclitus
ENSTNIG00000018483	-	53	42.403	ENSFHEG00000021454	-	86	42.403	Fundulus_heteroclitus
ENSTNIG00000018483	-	63	39.869	ENSGAFG00000007098	-	86	43.092	Gambusia_affinis
ENSTNIG00000018483	-	63	40.893	ENSGAFG00000013390	-	68	41.034	Gambusia_affinis
ENSTNIG00000018483	-	51	35.652	ENSGAFG00000018659	-	99	37.540	Gambusia_affinis
ENSTNIG00000018483	-	51	43.902	ENSGAFG00000008231	-	68	43.902	Gambusia_affinis
ENSTNIG00000018483	-	52	41.250	ENSHBUG00000002526	-	64	41.250	Haplochromis_burtoni
ENSTNIG00000018483	-	77	73.984	ENSHBUG00000016334	-	100	72.313	Haplochromis_burtoni
ENSTNIG00000018483	-	62	41.071	ENSKMAG00000008262	-	70	41.071	Kryptolebias_marmoratus
ENSTNIG00000018483	-	61	39.597	ENSKMAG00000000073	-	68	39.597	Kryptolebias_marmoratus
ENSTNIG00000018483	-	61	42.857	ENSLBEG00000010278	-	96	45.045	Labrus_bergylta
ENSTNIG00000018483	-	58	39.759	ENSLBEG00000009567	-	71	41.026	Labrus_bergylta
ENSTNIG00000018483	-	56	42.353	ENSLBEG00000002278	-	70	36.047	Labrus_bergylta
ENSTNIG00000018483	-	54	36.213	ENSLBEG00000025689	-	68	36.721	Labrus_bergylta
ENSTNIG00000018483	-	52	41.250	ENSMZEG00005009984	-	64	41.250	Maylandia_zebra
ENSTNIG00000018483	-	71	73.415	ENSMZEG00005008742	-	99	71.605	Maylandia_zebra
ENSTNIG00000018483	-	60	37.134	ENSMMOG00000016958	-	94	42.169	Mola_mola
ENSTNIG00000018483	-	86	77.551	ENSMALG00000016121	-	99	76.135	Monopterus_albus
ENSTNIG00000018483	-	77	74.146	ENSNBRG00000002946	-	100	72.476	Neolamprologus_brichardi
ENSTNIG00000018483	-	61	38.372	ENSNBRG00000024066	-	80	50.000	Neolamprologus_brichardi
ENSTNIG00000018483	-	51	42.484	ENSPFOG00000020449	-	100	42.484	Poecilia_formosa
ENSTNIG00000018483	-	60	41.135	ENSPFOG00000007728	-	100	41.447	Poecilia_formosa
ENSTNIG00000018483	-	54	43.119	ENSPFOG00000018782	-	59	43.119	Poecilia_formosa
ENSTNIG00000018483	-	56	35.115	ENSPFOG00000001375	-	100	39.474	Poecilia_formosa
ENSTNIG00000018483	-	54	38.068	ENSPFOG00000024048	-	86	38.816	Poecilia_formosa
ENSTNIG00000018483	-	59	38.129	ENSPFOG00000010113	-	68	38.129	Poecilia_formosa
ENSTNIG00000018483	-	55	37.209	ENSPFOG00000022488	-	73	38.182	Poecilia_formosa
ENSTNIG00000018483	-	56	35.115	ENSPLAG00000009662	-	65	35.115	Poecilia_latipinna
ENSTNIG00000018483	-	55	37.209	ENSPLAG00000009535	-	63	37.818	Poecilia_latipinna
ENSTNIG00000018483	-	54	38.830	ENSPLAG00000006864	-	70	38.333	Poecilia_latipinna
ENSTNIG00000018483	-	57	38.953	ENSPLAG00000009689	-	56	39.706	Poecilia_latipinna
ENSTNIG00000018483	-	50	42.135	ENSPLAG00000005090	-	92	42.135	Poecilia_latipinna
ENSTNIG00000018483	-	54	38.291	ENSPMEG00000013753	-	80	45.000	Poecilia_mexicana
ENSTNIG00000018483	-	53	43.590	ENSPMEG00000022839	-	88	44.737	Poecilia_mexicana
ENSTNIG00000018483	-	53	43.210	ENSPMEG00000012698	-	80	43.210	Poecilia_mexicana
ENSTNIG00000018483	-	56	31.481	ENSPMEG00000023205	-	69	39.130	Poecilia_mexicana
ENSTNIG00000018483	-	52	35.593	ENSPMEG00000023059	-	72	40.404	Poecilia_mexicana
ENSTNIG00000018483	-	57	38.710	ENSPMEG00000022981	-	56	39.706	Poecilia_mexicana
ENSTNIG00000018483	-	85	71.925	ENSPREG00000011812	-	86	70.725	Poecilia_reticulata
ENSTNIG00000018483	-	57	36.389	ENSPREG00000014373	-	82	39.441	Poecilia_reticulata
ENSTNIG00000018483	-	51	35.312	ENSPREG00000013154	-	87	44.444	Poecilia_reticulata
ENSTNIG00000018483	-	55	35.260	ENSPREG00000015254	-	64	41.964	Poecilia_reticulata
ENSTNIG00000018483	-	55	35.686	ENSPREG00000015132	-	66	34.677	Poecilia_reticulata
ENSTNIG00000018483	-	50	55.435	ENSPREG00000014028	-	100	41.436	Poecilia_reticulata
ENSTNIG00000018483	-	64	41.914	ENSPREG00000003894	-	89	41.914	Poecilia_reticulata
ENSTNIG00000018483	-	63	35.069	ENSPREG00000014330	-	62	40.000	Poecilia_reticulata
ENSTNIG00000018483	-	77	73.984	ENSPNYG00000009360	-	100	72.313	Pundamilia_nyererei
ENSTNIG00000018483	-	57	42.453	ENSSLDG00000004005	-	72	42.453	Seriola_lalandi_dorsalis
ENSTNIG00000018483	-	83	88.450	ENSTRUG00000022666	-	100	88.092	Takifugu_rubripes
ENSTNIG00000018483	-	50	37.222	ENSXETG00000025282	-	100	37.500	Xenopus_tropicalis
ENSTNIG00000018483	-	78	34.286	ENSXCOG00000013787	-	75	49.091	Xiphophorus_couchianus
ENSTNIG00000018483	-	50	40.461	ENSXCOG00000017328	-	79	40.461	Xiphophorus_couchianus
ENSTNIG00000018483	-	62	38.492	ENSXMAG00000029521	-	69	41.176	Xiphophorus_maculatus
ENSTNIG00000018483	-	55	39.404	ENSXMAG00000024744	-	68	41.503	Xiphophorus_maculatus
ENSTNIG00000018483	-	67	39.068	ENSXMAG00000023780	-	62	40.461	Xiphophorus_maculatus
ENSTNIG00000018483	-	62	40.461	ENSXMAG00000022362	-	87	42.373	Xiphophorus_maculatus
ENSTNIG00000018483	-	53	36.325	ENSXMAG00000022610	-	67	35.762	Xiphophorus_maculatus