EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000018498 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1625 bases
Position: chr19:4341168-4342792
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021672	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021907	-	681	-	ENSTNIP00000021672	226 (aa)	-	H3DMC4

Gene Model

Click here to download ENSTNIG00000018498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000018498	-	73	38.095	ENSTNIG00000014604	RAB7A	81	38.095
ENSTNIG00000018498	-	68	36.601	ENSTNIG00000016575	rab23	73	34.884
ENSTNIG00000018498	-	77	41.899	ENSTNIG00000009196	rab5aa	82	41.899
ENSTNIG00000018498	-	72	38.037	ENSTNIG00000008784	-	100	38.037
ENSTNIG00000018498	-	83	42.708	ENSTNIG00000013182	-	88	42.708
ENSTNIG00000018498	-	71	32.335	ENSTNIG00000007566	si:ch73-116o1.2	77	32.335
ENSTNIG00000018498	-	62	32.143	ENSTNIG00000017844	-	74	32.143
ENSTNIG00000018498	-	70	36.810	ENSTNIG00000016231	rab34a	62	36.810
ENSTNIG00000018498	-	76	46.023	ENSTNIG00000015000	zgc:101559	74	46.023
ENSTNIG00000018498	-	73	33.939	ENSTNIG00000013137	ran	75	33.939
ENSTNIG00000018498	-	73	32.738	ENSTNIG00000014591	rheb	90	32.738
ENSTNIG00000018498	-	74	35.673	ENSTNIG00000001195	rab9a	84	35.673
ENSTNIG00000018498	-	81	47.283	ENSTNIG00000018319	-	89	47.283
ENSTNIG00000018498	-	74	46.108	ENSTNIG00000009039	rab14	75	46.108
ENSTNIG00000018498	-	72	48.503	ENSTNIG00000010122	rab33a	72	48.503
ENSTNIG00000018498	-	72	44.382	ENSTNIG00000010125	rab33ba	74	44.382
ENSTNIG00000018498	-	70	33.750	ENSTNIG00000016158	rab34b	62	33.750
ENSTNIG00000018498	-	73	39.024	ENSTNIG00000018267	rab22a	84	39.024
ENSTNIG00000018498	-	72	44.311	ENSTNIG00000005090	rab25a	77	44.311
ENSTNIG00000018498	-	90	38.235	ENSTNIG00000001260	RAB15	85	38.235
ENSTNIG00000018498	-	74	41.667	ENSTNIG00000007882	rab18b	81	41.667
ENSTNIG00000018498	-	51	30.000	ENSTNIG00000017954	-	63	30.000
ENSTNIG00000018498	-	76	48.837	ENSTNIG00000004004	-	93	48.837
ENSTNIG00000018498	-	73	34.911	ENSTNIG00000001956	RAB9A	80	34.911
ENSTNIG00000018498	-	83	42.708	ENSTNIG00000011081	rab11bb	88	42.708
ENSTNIG00000018498	-	72	40.741	ENSTNIG00000015257	rab6bb	77	40.741
ENSTNIG00000018498	-	73	38.095	ENSTNIG00000011114	-	81	38.095
ENSTNIG00000018498	-	78	40.659	ENSTNIG00000002003	-	89	40.659
ENSTNIG00000018498	-	54	32.258	ENSTNIG00000012154	kras	85	30.061
ENSTNIG00000018498	-	81	40.984	ENSTNIG00000011711	rab5c	80	40.984
ENSTNIG00000018498	-	74	43.452	ENSTNIG00000008717	rab18a	81	43.452
ENSTNIG00000018498	-	77	41.379	ENSTNIG00000016414	rab15	81	41.379
ENSTNIG00000018498	-	73	33.537	ENSTNIG00000017951	rabl2	70	33.537
ENSTNIG00000018498	-	75	45.029	ENSTNIG00000003472	rab2a	80	45.029
ENSTNIG00000018498	-	80	42.246	ENSTNIG00000003679	-	87	42.246
ENSTNIG00000018498	-	67	39.873	ENSTNIG00000012343	-	67	39.873
ENSTNIG00000018498	-	74	39.881	ENSTNIG00000014859	rab12	69	39.881
ENSTNIG00000018498	-	74	45.509	ENSTNIG00000011300	si:dkey-16l2.16	79	45.509
ENSTNIG00000018498	-	83	41.837	ENSTNIG00000013184	-	88	41.837
ENSTNIG00000018498	-	91	70.874	ENSTNIG00000006650	RAB19	94	70.874
ENSTNIG00000018498	-	54	31.707	ENSTNIG00000006917	si:cabz01085950.1	93	31.707
ENSTNIG00000018498	-	73	50.000	ENSTNIG00000004511	-	99	50.000
ENSTNIG00000018498	-	81	37.297	ENSTNIG00000016831	RAB41	80	37.297
ENSTNIG00000018498	-	75	40.000	ENSTNIG00000001448	-	100	40.000
ENSTNIG00000018498	-	52	30.508	ENSTNIG00000003348	arf5	63	30.508
ENSTNIG00000018498	-	70	30.000	ENSTNIG00000014751	arl8ba	87	30.000
ENSTNIG00000018498	-	73	36.970	ENSTNIG00000001043	si:ch211-247i17.1	81	36.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018498	-	71	85.093	ENSAOCG00000015948	-	77	85.093	Amphiprion_ocellaris
ENSTNIG00000018498	-	99	78.571	ENSATEG00000012781	-	100	78.571	Anabas_testudineus
ENSTNIG00000018498	-	99	77.333	ENSACLG00000000860	-	100	77.333	Astatotilapia_calliptera
ENSTNIG00000018498	-	99	71.300	ENSAMXG00000039737	RAB19	99	71.300	Astyanax_mexicanus
ENSTNIG00000018498	-	88	67.500	ENSCPBG00000011914	RAB19	90	67.500	Chrysemys_picta_bellii
ENSTNIG00000018498	-	99	77.232	ENSCSEG00000010402	-	100	77.232	Cynoglossus_semilaevis
ENSTNIG00000018498	-	93	63.810	ENSFALG00000003709	RAB19	94	63.810	Ficedula_albicollis
ENSTNIG00000018498	-	100	78.761	ENSGACG00000018847	-	100	78.761	Gasterosteus_aculeatus
ENSTNIG00000018498	-	82	70.430	ENSGAGG00000013139	RAB19	84	70.430	Gopherus_agassizii
ENSTNIG00000018498	-	99	58.929	ENSIPUG00000016261	RAB19	98	58.929	Ictalurus_punctatus
ENSTNIG00000018498	-	99	63.229	ENSIPUG00000012509	-	99	63.229	Ictalurus_punctatus
ENSTNIG00000018498	-	99	77.232	ENSKMAG00000012657	-	100	77.232	Kryptolebias_marmoratus
ENSTNIG00000018498	-	82	83.784	ENSMZEG00005010813	-	89	83.784	Maylandia_zebra
ENSTNIG00000018498	-	96	77.880	ENSONIG00000016851	-	99	77.880	Oreochromis_niloticus
ENSTNIG00000018498	-	81	75.000	ENSPMGG00000009466	RAB19	84	75.000	Periophthalmus_magnuspinnatus
ENSTNIG00000018498	-	96	74.074	ENSPMGG00000007381	-	97	74.074	Periophthalmus_magnuspinnatus
ENSTNIG00000018498	-	98	77.928	ENSPNYG00000008498	-	98	77.928	Pundamilia_nyererei