EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000018572 (Gene tree)
Gene ID: -
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like neuron-specific RNA binding protein 3
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4304 bases
Position: chr3:12110305-12114608
Accession: ZDB-GENE-980526-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021746	RRM_5	PF13893.6	6.7e-12	1	2
ENSTNIP00000021746	RRM_5	PF13893.6	6.7e-12	2	2
ENSTNIP00000021746	RRM_1	PF00076.22	2.4e-62	1	3
ENSTNIP00000021746	RRM_1	PF00076.22	2.4e-62	2	3
ENSTNIP00000021746	RRM_1	PF00076.22	2.4e-62	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021981	-	1086	-	ENSTNIP00000021746	361 (aa)	-	H3DMJ8

Gene Model

Click here to download ENSTNIG00000018572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000018572	elavl3	72	42.529	ENSTNIG00000008062	celf3b	62	42.529
ENSTNIG00000018572	elavl3	65	43.023	ENSTNIG00000001919	-	51	43.023
ENSTNIG00000018572	elavl3	88	36.585	ENSTNIG00000010634	celf5a	99	34.579
ENSTNIG00000018572	elavl3	82	35.484	ENSTNIG00000016009	-	63	35.484
ENSTNIG00000018572	elavl3	50	33.514	ENSTNIG00000009477	rbms1a	58	33.514
ENSTNIG00000018572	elavl3	68	38.333	ENSTNIG00000016496	RBMS1	51	38.333
ENSTNIG00000018572	elavl3	99	83.243	ENSTNIG00000015485	elavl4	99	83.243
ENSTNIG00000018572	elavl3	91	59.394	ENSTNIG00000004733	-	96	59.394
ENSTNIG00000018572	elavl3	90	67.890	ENSTNIG00000019823	elavl1a	95	67.890
ENSTNIG00000018572	elavl3	99	81.301	ENSTNIG00000011312	elavl2	98	81.301
ENSTNIG00000018572	elavl3	89	34.615	ENSTNIG00000013091	TIAL1	76	34.615
ENSTNIG00000018572	elavl3	90	38.462	ENSTNIG00000011433	-	71	38.462
ENSTNIG00000018572	elavl3	90	37.349	ENSTNIG00000009153	pabpc1b	58	37.349
ENSTNIG00000018572	elavl3	90	37.349	ENSTNIG00000013307	pabpc1a	55	37.349
ENSTNIG00000018572	elavl3	86	35.065	ENSTNIG00000007201	-	62	35.065
ENSTNIG00000018572	elavl3	92	36.145	ENSTNIG00000016902	pabpc4	60	36.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018572	elavl3	99	88.333	ENSG00000196361	ELAVL3	99	89.444	Homo_sapiens
ENSTNIG00000018572	elavl3	99	95.543	ENSAPOG00000017565	elavl3	99	95.543	Acanthochromis_polyacanthus
ENSTNIG00000018572	elavl3	99	85.873	ENSAMEG00000010487	ELAVL3	99	86.981	Ailuropoda_melanoleuca
ENSTNIG00000018572	elavl3	99	95.543	ENSACIG00000024190	elavl3	99	95.543	Amphilophus_citrinellus
ENSTNIG00000018572	elavl3	99	99.162	ENSAOCG00000005054	elavl3	99	99.162	Amphiprion_ocellaris
ENSTNIG00000018572	elavl3	99	99.162	ENSAPEG00000011145	elavl3	99	99.162	Amphiprion_percula
ENSTNIG00000018572	elavl3	98	95.493	ENSATEG00000020941	elavl3	99	95.493	Anabas_testudineus
ENSTNIG00000018572	elavl3	99	91.233	ENSACAG00000016958	ELAVL3	93	91.233	Anolis_carolinensis
ENSTNIG00000018572	elavl3	99	88.301	ENSANAG00000030798	ELAVL3	99	89.415	Aotus_nancymaae
ENSTNIG00000018572	elavl3	99	95.531	ENSACLG00000018260	elavl3	99	95.531	Astatotilapia_calliptera
ENSTNIG00000018572	elavl3	99	96.438	ENSAMXG00000040498	elavl3	99	96.438	Astyanax_mexicanus
ENSTNIG00000018572	elavl3	99	88.611	ENSBTAG00000014412	ELAVL3	99	89.722	Bos_taurus
ENSTNIG00000018572	elavl3	99	86.649	ENSCJAG00000005589	ELAVL3	99	87.738	Callithrix_jacchus
ENSTNIG00000018572	elavl3	99	86.649	ENSCAFG00000017350	ELAVL3	99	87.738	Canis_familiaris
ENSTNIG00000018572	elavl3	99	88.366	ENSCAFG00020004614	ELAVL3	98	89.444	Canis_lupus_dingo
ENSTNIG00000018572	elavl3	99	86.921	ENSCHIG00000003436	ELAVL3	100	88.011	Capra_hircus
ENSTNIG00000018572	elavl3	99	86.685	ENSTSYG00000036621	ELAVL3	99	87.772	Carlito_syrichta
ENSTNIG00000018572	elavl3	89	74.006	ENSCAPG00000017620	ELAVL3	99	74.924	Cavia_aperea
ENSTNIG00000018572	elavl3	89	74.006	ENSCPOG00000001793	ELAVL3	99	74.924	Cavia_porcellus
ENSTNIG00000018572	elavl3	99	86.649	ENSCCAG00000034350	ELAVL3	99	87.738	Cebus_capucinus
ENSTNIG00000018572	elavl3	99	86.649	ENSCATG00000044086	ELAVL3	99	87.738	Cercocebus_atys
ENSTNIG00000018572	elavl3	99	86.376	ENSCLAG00000016404	ELAVL3	100	87.466	Chinchilla_lanigera
ENSTNIG00000018572	elavl3	96	90.129	ENSCSAG00000006755	ELAVL3	100	90.129	Chlorocebus_sabaeus
ENSTNIG00000018572	elavl3	99	91.667	ENSCPBG00000023982	ELAVL3	99	91.667	Chrysemys_picta_bellii
ENSTNIG00000018572	elavl3	99	86.649	ENSCANG00000038728	ELAVL3	99	87.738	Colobus_angolensis_palliatus
ENSTNIG00000018572	elavl3	99	86.104	ENSCGRG00001018927	Elavl3	99	87.193	Cricetulus_griseus_chok1gshd
ENSTNIG00000018572	elavl3	99	86.104	ENSCGRG00000007158	Elavl3	99	87.193	Cricetulus_griseus_crigri
ENSTNIG00000018572	elavl3	99	94.678	ENSCSEG00000021095	elavl3	99	94.678	Cynoglossus_semilaevis
ENSTNIG00000018572	elavl3	99	99.162	ENSCVAG00000014060	elavl3	99	99.162	Cyprinodon_variegatus
ENSTNIG00000018572	elavl3	99	99.162	ENSDARG00000014420	elavl3	99	99.162	Danio_rerio
ENSTNIG00000018572	elavl3	99	85.559	ENSDORG00000002538	Elavl3	100	86.649	Dipodomys_ordii
ENSTNIG00000018572	elavl3	50	97.059	ENSETEG00000000164	-	57	97.059	Echinops_telfairi
ENSTNIG00000018572	elavl3	99	86.649	ENSEASG00005004561	ELAVL3	99	87.738	Equus_asinus_asinus
ENSTNIG00000018572	elavl3	99	88.366	ENSECAG00000020594	ELAVL3	99	88.800	Equus_caballus
ENSTNIG00000018572	elavl3	99	94.986	ENSELUG00000023043	elavl3	99	94.986	Esox_lucius
ENSTNIG00000018572	elavl3	99	86.649	ENSFCAG00000024763	ELAVL3	99	87.738	Felis_catus
ENSTNIG00000018572	elavl3	99	82.730	ENSFDAG00000008449	ELAVL3	99	82.730	Fukomys_damarensis
ENSTNIG00000018572	elavl3	99	95.531	ENSFHEG00000001675	elavl3	99	95.531	Fundulus_heteroclitus
ENSTNIG00000018572	elavl3	99	98.883	ENSGMOG00000003760	elavl3	99	98.883	Gadus_morhua
ENSTNIG00000018572	elavl3	56	74.615	ENSGALG00000047364	-	100	74.615	Gallus_gallus
ENSTNIG00000018572	elavl3	99	98.611	ENSGAFG00000016015	elavl3	99	98.611	Gambusia_affinis
ENSTNIG00000018572	elavl3	99	98.603	ENSGACG00000013839	elavl3	99	98.603	Gasterosteus_aculeatus
ENSTNIG00000018572	elavl3	84	90.688	ENSGAGG00000016141	ELAVL3	100	90.688	Gopherus_agassizii
ENSTNIG00000018572	elavl3	99	86.649	ENSGGOG00000008635	ELAVL3	100	87.738	Gorilla_gorilla
ENSTNIG00000018572	elavl3	99	95.810	ENSHBUG00000020978	elavl3	99	95.810	Haplochromis_burtoni
ENSTNIG00000018572	elavl3	99	86.649	ENSHGLG00000015199	ELAVL3	99	87.738	Heterocephalus_glaber_female
ENSTNIG00000018572	elavl3	84	68.317	ENSHGLG00000019379	-	97	68.317	Heterocephalus_glaber_female
ENSTNIG00000018572	elavl3	94	85.100	ENSHGLG00100011200	ELAVL3	99	86.246	Heterocephalus_glaber_male
ENSTNIG00000018572	elavl3	99	98.886	ENSHCOG00000015894	elavl3	99	98.886	Hippocampus_comes
ENSTNIG00000018572	elavl3	99	94.693	ENSIPUG00000013002	elavl3	98	94.693	Ictalurus_punctatus
ENSTNIG00000018572	elavl3	99	86.649	ENSSTOG00000021111	ELAVL3	99	87.738	Ictidomys_tridecemlineatus
ENSTNIG00000018572	elavl3	99	87.466	ENSJJAG00000023513	Elavl3	100	87.466	Jaculus_jaculus
ENSTNIG00000018572	elavl3	99	95.543	ENSKMAG00000017412	elavl3	99	95.543	Kryptolebias_marmoratus
ENSTNIG00000018572	elavl3	99	95.543	ENSLBEG00000008073	elavl3	98	95.543	Labrus_bergylta
ENSTNIG00000018572	elavl3	99	95.616	ENSLOCG00000007647	elavl3	99	95.616	Lepisosteus_oculatus
ENSTNIG00000018572	elavl3	99	86.450	ENSLAFG00000005013	ELAVL3	99	87.534	Loxodonta_africana
ENSTNIG00000018572	elavl3	99	86.649	ENSMFAG00000003692	ELAVL3	99	87.738	Macaca_fascicularis
ENSTNIG00000018572	elavl3	99	86.649	ENSMMUG00000020616	ELAVL3	99	87.738	Macaca_mulatta
ENSTNIG00000018572	elavl3	99	86.376	ENSMNEG00000043973	ELAVL3	99	87.466	Macaca_nemestrina
ENSTNIG00000018572	elavl3	97	83.265	ENSMLEG00000013976	ELAVL3	99	83.265	Mandrillus_leucophaeus
ENSTNIG00000018572	elavl3	99	94.972	ENSMAMG00000011697	elavl3	99	94.972	Mastacembelus_armatus
ENSTNIG00000018572	elavl3	99	99.162	ENSMZEG00005019053	elavl3	99	99.162	Maylandia_zebra
ENSTNIG00000018572	elavl3	99	86.104	ENSMAUG00000016478	Elavl3	100	87.193	Mesocricetus_auratus
ENSTNIG00000018572	elavl3	99	86.649	ENSMICG00000016528	ELAVL3	100	87.738	Microcebus_murinus
ENSTNIG00000018572	elavl3	99	86.104	ENSMOCG00000002046	Elavl3	99	87.193	Microtus_ochrogaster
ENSTNIG00000018572	elavl3	99	95.531	ENSMMOG00000012154	elavl3	99	95.531	Mola_mola
ENSTNIG00000018572	elavl3	99	90.028	ENSMODG00000006653	ELAVL3	93	90.028	Monodelphis_domestica
ENSTNIG00000018572	elavl3	99	99.164	ENSMALG00000016659	elavl3	99	99.164	Monopterus_albus
ENSTNIG00000018572	elavl3	98	88.451	MGP_CAROLIEiJ_G0031894	Elavl3	100	89.577	Mus_caroli
ENSTNIG00000018572	elavl3	99	86.104	ENSMUSG00000003410	Elavl3	99	88.000	Mus_musculus
ENSTNIG00000018572	elavl3	98	88.169	MGP_PahariEiJ_G0014760	Elavl3	100	89.296	Mus_pahari
ENSTNIG00000018572	elavl3	99	86.376	ENSMPUG00000005040	ELAVL3	99	87.466	Mustela_putorius_furo
ENSTNIG00000018572	elavl3	99	87.805	ENSMLUG00000016320	ELAVL3	99	87.805	Myotis_lucifugus
ENSTNIG00000018572	elavl3	99	86.649	ENSNGAG00000000968	Elavl3	99	87.738	Nannospalax_galili
ENSTNIG00000018572	elavl3	99	99.164	ENSNBRG00000010319	elavl3	99	99.164	Neolamprologus_brichardi
ENSTNIG00000018572	elavl3	99	90.463	ENSMEUG00000016706	ELAVL3	100	90.463	Notamacropus_eugenii
ENSTNIG00000018572	elavl3	85	88.400	ENSOPRG00000007373	ELAVL3	100	88.400	Ochotona_princeps
ENSTNIG00000018572	elavl3	99	86.649	ENSODEG00000015790	ELAVL3	99	87.738	Octodon_degus
ENSTNIG00000018572	elavl3	100	99.169	ENSONIG00000001538	elavl3	99	99.169	Oreochromis_niloticus
ENSTNIG00000018572	elavl3	88	90.196	ENSOANG00000015046	ELAVL3	98	90.196	Ornithorhynchus_anatinus
ENSTNIG00000018572	elavl3	99	99.162	ENSORLG00000005379	elavl3	99	99.162	Oryzias_latipes
ENSTNIG00000018572	elavl3	99	99.162	ENSORLG00020004570	elavl3	99	99.162	Oryzias_latipes_hni
ENSTNIG00000018572	elavl3	98	99.155	ENSORLG00015000662	elavl3	98	99.155	Oryzias_latipes_hsok
ENSTNIG00000018572	elavl3	99	95.531	ENSOMEG00000023959	elavl3	99	95.531	Oryzias_melastigma
ENSTNIG00000018572	elavl3	99	86.649	ENSOGAG00000007072	ELAVL3	99	87.738	Otolemur_garnettii
ENSTNIG00000018572	elavl3	99	86.921	ENSOARG00000018464	ELAVL3	99	88.011	Ovis_aries
ENSTNIG00000018572	elavl3	99	86.649	ENSPPAG00000033972	ELAVL3	99	87.738	Pan_paniscus
ENSTNIG00000018572	elavl3	99	86.649	ENSPPRG00000005151	ELAVL3	99	87.738	Panthera_pardus
ENSTNIG00000018572	elavl3	97	84.164	ENSPTIG00000013610	ELAVL3	97	85.337	Panthera_tigris_altaica
ENSTNIG00000018572	elavl3	99	86.649	ENSPTRG00000010506	ELAVL3	99	87.738	Pan_troglodytes
ENSTNIG00000018572	elavl3	99	86.649	ENSPANG00000005849	ELAVL3	99	87.738	Papio_anubis
ENSTNIG00000018572	elavl3	99	98.329	ENSPKIG00000016207	elavl3	99	98.329	Paramormyrops_kingsleyae
ENSTNIG00000018572	elavl3	99	95.531	ENSPMGG00000002016	elavl3	99	95.531	Periophthalmus_magnuspinnatus
ENSTNIG00000018572	elavl3	98	94.086	ENSPFOG00000007754	elavl3	100	94.086	Poecilia_formosa
ENSTNIG00000018572	elavl3	98	95.493	ENSPLAG00000001547	elavl3	99	95.493	Poecilia_latipinna
ENSTNIG00000018572	elavl3	98	95.493	ENSPMEG00000010156	elavl3	99	95.493	Poecilia_mexicana
ENSTNIG00000018572	elavl3	99	99.162	ENSPREG00000006971	elavl3	99	99.162	Poecilia_reticulata
ENSTNIG00000018572	elavl3	84	76.207	ENSPPYG00000009583	-	98	77.586	Pongo_abelii
ENSTNIG00000018572	elavl3	83	85.185	ENSPCAG00000015952	ELAVL3	65	85.271	Procavia_capensis
ENSTNIG00000018572	elavl3	99	86.649	ENSPCOG00000023781	ELAVL3	99	87.738	Propithecus_coquereli
ENSTNIG00000018572	elavl3	99	86.649	ENSPVAG00000014893	ELAVL3	99	87.738	Pteropus_vampyrus
ENSTNIG00000018572	elavl3	99	95.531	ENSPNYG00000013186	elavl3	97	95.531	Pundamilia_nyererei
ENSTNIG00000018572	elavl3	99	96.438	ENSPNAG00000003633	elavl3	99	96.438	Pygocentrus_nattereri
ENSTNIG00000018572	elavl3	99	86.104	ENSRNOG00000013752	Elavl3	99	87.193	Rattus_norvegicus
ENSTNIG00000018572	elavl3	99	86.649	ENSRBIG00000034762	ELAVL3	99	87.738	Rhinopithecus_bieti
ENSTNIG00000018572	elavl3	90	85.771	ENSRROG00000034305	ELAVL3	99	90.435	Rhinopithecus_roxellana
ENSTNIG00000018572	elavl3	99	86.649	ENSSBOG00000030047	ELAVL3	100	88.571	Saimiri_boliviensis_boliviensis
ENSTNIG00000018572	elavl3	96	92.275	ENSSHAG00000005583	ELAVL3	100	92.275	Sarcophilus_harrisii
ENSTNIG00000018572	elavl3	94	98.225	ENSSFOG00015023630	elavl3	99	98.225	Scleropages_formosus
ENSTNIG00000018572	elavl3	99	94.693	ENSSMAG00000004671	elavl3	99	94.693	Scophthalmus_maximus
ENSTNIG00000018572	elavl3	99	95.543	ENSSDUG00000020708	elavl3	99	95.543	Seriola_dumerili
ENSTNIG00000018572	elavl3	99	97.260	ENSSLDG00000013769	elavl3	99	97.260	Seriola_lalandi_dorsalis
ENSTNIG00000018572	elavl3	99	77.446	ENSSARG00000005949	ELAVL3	100	77.989	Sorex_araneus
ENSTNIG00000018572	elavl3	99	95.543	ENSSPAG00000000990	elavl3	99	95.543	Stegastes_partitus
ENSTNIG00000018572	elavl3	99	86.649	ENSSSCG00000013617	ELAVL3	99	87.738	Sus_scrofa
ENSTNIG00000018572	elavl3	98	95.493	ENSTRUG00000010719	elavl3	99	95.493	Takifugu_rubripes
ENSTNIG00000018572	elavl3	97	81.212	ENSTBEG00000006133	ELAVL3	100	82.424	Tupaia_belangeri
ENSTNIG00000018572	elavl3	99	86.376	ENSTTRG00000001789	ELAVL3	99	87.466	Tursiops_truncatus
ENSTNIG00000018572	elavl3	99	85.873	ENSUAMG00000000405	ELAVL3	98	86.944	Ursus_americanus
ENSTNIG00000018572	elavl3	97	82.450	ENSUMAG00000019546	ELAVL3	87	83.775	Ursus_maritimus
ENSTNIG00000018572	elavl3	99	88.333	ENSVVUG00000023733	ELAVL3	99	89.444	Vulpes_vulpes
ENSTNIG00000018572	elavl3	99	88.649	ENSXETG00000016741	elavl3	99	88.649	Xenopus_tropicalis
ENSTNIG00000018572	elavl3	99	95.531	ENSXMAG00000018287	elavl3	99	95.531	Xiphophorus_maculatus