EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000018706 (Gene tree)
Gene ID: -
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex%2C subunit 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 14428 bases
Position: chrUn_random:96040058-96054485
Accession: ZDB-GENE-040915-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021885	Not1	PF04054.15	3.5e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022121	-	7116	-	ENSTNIP00000021885	2371 (aa)	-	H3DMY7

Gene Model

Click here to download ENSTNIG00000018706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018706's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018706	cnot1	100	89.144	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSTNIG00000018706	cnot1	97	98.878	ENSAPOG00000005042	cnot1	100	98.878	Acanthochromis_polyacanthus
ENSTNIG00000018706	cnot1	100	89.102	ENSAMEG00000017298	CNOT1	100	89.256	Ailuropoda_melanoleuca
ENSTNIG00000018706	cnot1	90	93.145	ENSACIG00000016003	cnot1	100	93.377	Amphilophus_citrinellus
ENSTNIG00000018706	cnot1	100	93.389	ENSAPEG00000022342	cnot1	100	93.347	Amphiprion_percula
ENSTNIG00000018706	cnot1	97	99.018	ENSATEG00000012892	cnot1	100	99.018	Anabas_testudineus
ENSTNIG00000018706	cnot1	100	88.047	ENSAPLG00000007162	CNOT1	100	88.255	Anas_platyrhynchos
ENSTNIG00000018706	cnot1	91	87.638	ENSACAG00000001602	CNOT1	98	87.592	Anolis_carolinensis
ENSTNIG00000018706	cnot1	100	86.105	ENSANAG00000038198	CNOT1	100	86.296	Aotus_nancymaae
ENSTNIG00000018706	cnot1	97	99.018	ENSACLG00000014234	cnot1	100	99.018	Astatotilapia_calliptera
ENSTNIG00000018706	cnot1	100	92.131	ENSAMXG00000013170	cnot1	100	92.391	Astyanax_mexicanus
ENSTNIG00000018706	cnot1	95	95.808	ENSBTAG00000020782	CNOT1	100	95.808	Bos_taurus
ENSTNIG00000018706	cnot1	78	41.187	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSTNIG00000018706	cnot1	100	88.833	ENSCJAG00000011318	CNOT1	100	91.636	Callithrix_jacchus
ENSTNIG00000018706	cnot1	100	88.524	ENSCAFG00000008426	CNOT1	100	88.718	Canis_familiaris
ENSTNIG00000018706	cnot1	100	87.879	ENSCAFG00020010156	CNOT1	100	92.644	Canis_lupus_dingo
ENSTNIG00000018706	cnot1	100	88.917	ENSCHIG00000010452	CNOT1	100	89.070	Capra_hircus
ENSTNIG00000018706	cnot1	100	88.875	ENSTSYG00000006888	CNOT1	100	89.028	Carlito_syrichta
ENSTNIG00000018706	cnot1	100	85.208	ENSCPOG00000013026	CNOT1	100	85.440	Cavia_porcellus
ENSTNIG00000018706	cnot1	100	87.333	ENSCCAG00000026333	CNOT1	100	87.484	Cebus_capucinus
ENSTNIG00000018706	cnot1	100	88.917	ENSCATG00000032625	CNOT1	100	89.070	Cercocebus_atys
ENSTNIG00000018706	cnot1	100	88.833	ENSCLAG00000006289	CNOT1	100	88.986	Chinchilla_lanigera
ENSTNIG00000018706	cnot1	100	88.917	ENSCSAG00000004731	CNOT1	100	89.070	Chlorocebus_sabaeus
ENSTNIG00000018706	cnot1	80	97.727	ENSCHOG00000009712	CNOT1	83	96.466	Choloepus_hoffmanni
ENSTNIG00000018706	cnot1	93	95.626	ENSCPBG00000026222	CNOT1	98	96.008	Chrysemys_picta_bellii
ENSTNIG00000018706	cnot1	100	58.347	ENSCING00000009149	-	100	58.430	Ciona_intestinalis
ENSTNIG00000018706	cnot1	89	62.849	ENSCSAVG00000002414	-	99	62.853	Ciona_savignyi
ENSTNIG00000018706	cnot1	100	87.174	ENSCANG00000040534	CNOT1	100	87.324	Colobus_angolensis_palliatus
ENSTNIG00000018706	cnot1	100	88.778	ENSCGRG00001016365	Cnot1	100	88.861	Cricetulus_griseus_chok1gshd
ENSTNIG00000018706	cnot1	100	88.778	ENSCGRG00000001714	Cnot1	100	88.861	Cricetulus_griseus_crigri
ENSTNIG00000018706	cnot1	97	98.177	ENSCVAG00000018930	cnot1	100	98.177	Cyprinodon_variegatus
ENSTNIG00000018706	cnot1	100	91.535	ENSDARG00000004174	cnot1	100	91.684	Danio_rerio
ENSTNIG00000018706	cnot1	100	86.947	ENSDNOG00000013250	CNOT1	100	86.906	Dasypus_novemcinctus
ENSTNIG00000018706	cnot1	99	46.221	FBgn0085436	Not1	99	48.549	Drosophila_melanogaster
ENSTNIG00000018706	cnot1	85	93.825	ENSETEG00000012806	CNOT1	84	93.825	Echinops_telfairi
ENSTNIG00000018706	cnot1	82	75.744	ENSEBUG00000011534	cnot1	95	75.744	Eptatretus_burgeri
ENSTNIG00000018706	cnot1	95	95.427	ENSEASG00005005819	CNOT1	100	95.808	Equus_asinus_asinus
ENSTNIG00000018706	cnot1	100	88.875	ENSECAG00000009889	CNOT1	100	89.111	Equus_caballus
ENSTNIG00000018706	cnot1	89	88.498	ENSEEUG00000006015	CNOT1	90	88.498	Erinaceus_europaeus
ENSTNIG00000018706	cnot1	100	91.997	ENSELUG00000014085	cnot1	100	92.079	Esox_lucius
ENSTNIG00000018706	cnot1	100	88.575	ENSFCAG00000025155	CNOT1	100	88.769	Felis_catus
ENSTNIG00000018706	cnot1	100	88.527	ENSFALG00000007285	CNOT1	100	88.444	Ficedula_albicollis
ENSTNIG00000018706	cnot1	100	88.792	ENSFDAG00000013399	CNOT1	100	88.945	Fukomys_damarensis
ENSTNIG00000018706	cnot1	100	92.651	ENSFHEG00000020574	cnot1	100	92.818	Fundulus_heteroclitus
ENSTNIG00000018706	cnot1	91	92.801	ENSGMOG00000012864	cnot1	100	92.940	Gadus_morhua
ENSTNIG00000018706	cnot1	100	88.444	ENSGALG00000002301	CNOT1	100	88.360	Gallus_gallus
ENSTNIG00000018706	cnot1	100	91.712	ENSGAFG00000015005	cnot1	100	91.838	Gambusia_affinis
ENSTNIG00000018706	cnot1	91	94.234	ENSGACG00000002606	cnot1	100	97.697	Gasterosteus_aculeatus
ENSTNIG00000018706	cnot1	100	88.699	ENSGAGG00000022646	CNOT1	100	89.157	Gopherus_agassizii
ENSTNIG00000018706	cnot1	100	88.958	ENSGGOG00000009547	CNOT1	100	89.111	Gorilla_gorilla
ENSTNIG00000018706	cnot1	97	99.018	ENSHBUG00000001729	cnot1	100	99.018	Haplochromis_burtoni
ENSTNIG00000018706	cnot1	100	88.792	ENSHGLG00000014322	CNOT1	100	88.945	Heterocephalus_glaber_female
ENSTNIG00000018706	cnot1	100	93.408	ENSHCOG00000006501	cnot1	100	93.403	Hippocampus_comes
ENSTNIG00000018706	cnot1	100	90.438	ENSIPUG00000011915	cnot1	100	90.438	Ictalurus_punctatus
ENSTNIG00000018706	cnot1	100	88.708	ENSSTOG00000005490	CNOT1	100	88.861	Ictidomys_tridecemlineatus
ENSTNIG00000018706	cnot1	100	88.208	ENSJJAG00000000633	Cnot1	100	88.360	Jaculus_jaculus
ENSTNIG00000018706	cnot1	100	93.567	ENSKMAG00000006149	cnot1	100	93.693	Kryptolebias_marmoratus
ENSTNIG00000018706	cnot1	95	98.204	ENSLBEG00000004740	cnot1	100	98.204	Labrus_bergylta
ENSTNIG00000018706	cnot1	100	89.445	ENSLACG00000010869	CNOT1	100	89.403	Latimeria_chalumnae
ENSTNIG00000018706	cnot1	100	92.349	ENSLOCG00000006324	cnot1	100	92.600	Lepisosteus_oculatus
ENSTNIG00000018706	cnot1	100	88.676	ENSLAFG00000000098	CNOT1	100	88.870	Loxodonta_africana
ENSTNIG00000018706	cnot1	100	89.144	ENSMFAG00000035888	CNOT1	100	89.298	Macaca_fascicularis
ENSTNIG00000018706	cnot1	100	88.875	ENSMMUG00000014625	CNOT1	94	97.455	Macaca_mulatta
ENSTNIG00000018706	cnot1	100	86.373	ENSMNEG00000031820	CNOT1	100	88.714	Macaca_nemestrina
ENSTNIG00000018706	cnot1	100	87.536	ENSMLEG00000040933	CNOT1	100	87.729	Mandrillus_leucophaeus
ENSTNIG00000018706	cnot1	100	91.757	ENSMAMG00000016524	cnot1	100	91.967	Mastacembelus_armatus
ENSTNIG00000018706	cnot1	97	99.018	ENSMZEG00005016210	cnot1	100	99.018	Maylandia_zebra
ENSTNIG00000018706	cnot1	100	88.629	ENSMGAG00000001908	CNOT1	100	88.545	Meleagris_gallopavo
ENSTNIG00000018706	cnot1	100	89.177	ENSMICG00000007071	CNOT1	100	89.093	Microcebus_murinus
ENSTNIG00000018706	cnot1	100	88.667	ENSMOCG00000017969	Cnot1	100	88.903	Microtus_ochrogaster
ENSTNIG00000018706	cnot1	97	95.652	ENSMMOG00000019134	cnot1	100	95.652	Mola_mola
ENSTNIG00000018706	cnot1	100	88.532	ENSMODG00000014199	CNOT1	100	88.616	Monodelphis_domestica
ENSTNIG00000018706	cnot1	100	92.636	ENSMALG00000008645	cnot1	100	92.720	Monopterus_albus
ENSTNIG00000018706	cnot1	95	95.238	MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	Mus_caroli
ENSTNIG00000018706	cnot1	100	88.852	ENSMUSG00000036550	Cnot1	100	89.089	Mus_musculus
ENSTNIG00000018706	cnot1	100	88.708	MGP_PahariEiJ_G0023028	Cnot1	100	88.945	Mus_pahari
ENSTNIG00000018706	cnot1	100	88.708	MGP_SPRETEiJ_G0032549	Cnot1	100	88.819	Mus_spretus
ENSTNIG00000018706	cnot1	100	88.875	ENSMPUG00000004830	CNOT1	100	89.028	Mustela_putorius_furo
ENSTNIG00000018706	cnot1	100	88.667	ENSMLUG00000003728	CNOT1	100	88.819	Myotis_lucifugus
ENSTNIG00000018706	cnot1	100	88.708	ENSNGAG00000018628	Cnot1	100	88.861	Nannospalax_galili
ENSTNIG00000018706	cnot1	94	99.018	ENSNBRG00000019358	cnot1	100	99.018	Neolamprologus_brichardi
ENSTNIG00000018706	cnot1	100	88.954	ENSNLEG00000003566	CNOT1	100	89.070	Nomascus_leucogenys
ENSTNIG00000018706	cnot1	87	89.262	ENSMEUG00000006145	CNOT1	88	89.262	Notamacropus_eugenii
ENSTNIG00000018706	cnot1	86	96.444	ENSOPRG00000005604	CNOT1	86	96.444	Ochotona_princeps
ENSTNIG00000018706	cnot1	100	88.750	ENSODEG00000016337	CNOT1	100	88.986	Octodon_degus
ENSTNIG00000018706	cnot1	100	94.221	ENSONIG00000007358	cnot1	100	94.221	Oreochromis_niloticus
ENSTNIG00000018706	cnot1	91	88.273	ENSOANG00000012109	CNOT1	100	88.589	Ornithorhynchus_anatinus
ENSTNIG00000018706	cnot1	100	88.875	ENSOCUG00000006911	CNOT1	100	89.028	Oryctolagus_cuniculus
ENSTNIG00000018706	cnot1	100	93.361	ENSORLG00000013734	cnot1	100	93.486	Oryzias_latipes
ENSTNIG00000018706	cnot1	100	91.597	ENSORLG00020017012	cnot1	100	91.722	Oryzias_latipes_hni
ENSTNIG00000018706	cnot1	100	91.472	ENSORLG00015007091	cnot1	100	91.597	Oryzias_latipes_hsok
ENSTNIG00000018706	cnot1	100	91.023	ENSOMEG00000015124	cnot1	100	90.981	Oryzias_melastigma
ENSTNIG00000018706	cnot1	100	89.153	ENSOGAG00000000543	CNOT1	100	89.070	Otolemur_garnettii
ENSTNIG00000018706	cnot1	100	88.917	ENSOARG00000001567	CNOT1	100	89.070	Ovis_aries
ENSTNIG00000018706	cnot1	100	88.917	ENSPPAG00000022013	CNOT1	100	89.070	Pan_paniscus
ENSTNIG00000018706	cnot1	100	88.875	ENSPPRG00000004867	CNOT1	100	89.028	Panthera_pardus
ENSTNIG00000018706	cnot1	100	88.875	ENSPTIG00000012589	CNOT1	100	89.028	Panthera_tigris_altaica
ENSTNIG00000018706	cnot1	100	88.617	ENSPTRG00000008183	CNOT1	100	88.810	Pan_troglodytes
ENSTNIG00000018706	cnot1	100	85.845	ENSPANG00000020901	CNOT1	100	86.035	Papio_anubis
ENSTNIG00000018706	cnot1	97	94.382	ENSPKIG00000002914	CNOT1	99	94.382	Paramormyrops_kingsleyae
ENSTNIG00000018706	cnot1	100	92.430	ENSPKIG00000023538	CNOT1	100	92.346	Paramormyrops_kingsleyae
ENSTNIG00000018706	cnot1	100	88.569	ENSPSIG00000005499	CNOT1	100	88.486	Pelodiscus_sinensis
ENSTNIG00000018706	cnot1	100	78.747	ENSPMAG00000009381	cnot1	100	78.965	Petromyzon_marinus
ENSTNIG00000018706	cnot1	95	96.008	ENSPCIG00000007343	CNOT1	100	96.008	Phascolarctos_cinereus
ENSTNIG00000018706	cnot1	99	93.038	ENSPFOG00000003497	cnot1	100	93.038	Poecilia_formosa
ENSTNIG00000018706	cnot1	95	97.605	ENSPLAG00000014018	cnot1	100	97.605	Poecilia_latipinna
ENSTNIG00000018706	cnot1	95	97.605	ENSPMEG00000005868	cnot1	100	97.605	Poecilia_mexicana
ENSTNIG00000018706	cnot1	95	97.605	ENSPREG00000018793	cnot1	100	97.605	Poecilia_reticulata
ENSTNIG00000018706	cnot1	100	88.917	ENSPPYG00000007410	CNOT1	100	89.070	Pongo_abelii
ENSTNIG00000018706	cnot1	87	89.894	ENSPCAG00000003241	CNOT1	88	89.894	Procavia_capensis
ENSTNIG00000018706	cnot1	100	88.750	ENSPCOG00000027139	CNOT1	100	88.833	Propithecus_coquereli
ENSTNIG00000018706	cnot1	100	86.167	ENSPVAG00000004243	CNOT1	100	86.608	Pteropus_vampyrus
ENSTNIG00000018706	cnot1	97	99.018	ENSPNYG00000012919	cnot1	100	99.018	Pundamilia_nyererei
ENSTNIG00000018706	cnot1	100	91.290	ENSPNAG00000000246	cnot1	100	91.374	Pygocentrus_nattereri
ENSTNIG00000018706	cnot1	100	88.667	ENSRNOG00000012271	Cnot1	100	88.903	Rattus_norvegicus
ENSTNIG00000018706	cnot1	100	86.789	ENSRBIG00000044598	CNOT1	100	86.938	Rhinopithecus_bieti
ENSTNIG00000018706	cnot1	100	88.917	ENSRROG00000000906	CNOT1	100	89.070	Rhinopithecus_roxellana
ENSTNIG00000018706	cnot1	100	84.749	ENSSBOG00000029155	CNOT1	100	84.896	Saimiri_boliviensis_boliviensis
ENSTNIG00000018706	cnot1	100	88.569	ENSSHAG00000012187	CNOT1	100	88.611	Sarcophilus_harrisii
ENSTNIG00000018706	cnot1	100	89.954	ENSSFOG00015017614	cnot1	100	89.954	Scleropages_formosus
ENSTNIG00000018706	cnot1	97	99.018	ENSSMAG00000013844	cnot1	100	99.018	Scophthalmus_maximus
ENSTNIG00000018706	cnot1	97	99.018	ENSSDUG00000021491	cnot1	100	99.018	Seriola_dumerili
ENSTNIG00000018706	cnot1	97	99.018	ENSSLDG00000014816	cnot1	100	99.018	Seriola_lalandi_dorsalis
ENSTNIG00000018706	cnot1	100	93.389	ENSSPAG00000018802	cnot1	100	93.515	Stegastes_partitus
ENSTNIG00000018706	cnot1	95	95.808	ENSSSCG00000002799	CNOT1	100	95.808	Sus_scrofa
ENSTNIG00000018706	cnot1	100	88.333	ENSTGUG00000005919	CNOT1	100	88.250	Taeniopygia_guttata
ENSTNIG00000018706	cnot1	81	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSTNIG00000018706	cnot1	95	87.931	ENSTTRG00000008460	CNOT1	95	88.140	Tursiops_truncatus
ENSTNIG00000018706	cnot1	100	88.875	ENSUAMG00000009251	CNOT1	100	89.028	Ursus_americanus
ENSTNIG00000018706	cnot1	100	88.875	ENSUMAG00000021291	CNOT1	100	89.028	Ursus_maritimus
ENSTNIG00000018706	cnot1	97	91.441	ENSVPAG00000008846	CNOT1	97	91.441	Vicugna_pacos
ENSTNIG00000018706	cnot1	100	87.879	ENSVVUG00000024037	CNOT1	100	92.644	Vulpes_vulpes
ENSTNIG00000018706	cnot1	100	84.002	ENSXETG00000015900	cnot1	100	84.499	Xenopus_tropicalis
ENSTNIG00000018706	cnot1	100	91.879	ENSXCOG00000013552	cnot1	100	92.005	Xiphophorus_couchianus
ENSTNIG00000018706	cnot1	100	91.921	ENSXMAG00000006031	cnot1	100	92.047	Xiphophorus_maculatus