EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000018808 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3760 bases
Position: chr18:10663575-10667334
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021991	zf-CCCH	PF00642.24	1.6e-05	1	1
ENSTNIP00000021991	TRM	PF02005.16	2e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022227	-	1701	-	ENSTNIP00000021991	567 (aa)	-	H3DN92

Gene Model

Click here to download ENSTNIG00000018808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018808	trmt1	98	66.725	ENSG00000104907	TRMT1	99	74.479	Homo_sapiens
ENSTNIG00000018808	trmt1	98	65.445	ENSAMEG00000012598	TRMT1	85	65.445	Ailuropoda_melanoleuca
ENSTNIG00000018808	trmt1	99	77.217	ENSACIG00000018680	trmt1	89	77.217	Amphilophus_citrinellus
ENSTNIG00000018808	trmt1	99	85.192	ENSAOCG00000006781	trmt1	87	85.192	Amphiprion_ocellaris
ENSTNIG00000018808	trmt1	99	85.366	ENSAPEG00000007712	trmt1	87	85.366	Amphiprion_percula
ENSTNIG00000018808	trmt1	98	86.092	ENSATEG00000001872	trmt1	85	86.092	Anabas_testudineus
ENSTNIG00000018808	trmt1	98	67.193	ENSACAG00000003825	TRMT1	92	67.193	Anolis_carolinensis
ENSTNIG00000018808	trmt1	98	64.572	ENSANAG00000023016	TRMT1	92	64.572	Aotus_nancymaae
ENSTNIG00000018808	trmt1	98	82.923	ENSACLG00000010073	trmt1	93	82.923	Astatotilapia_calliptera
ENSTNIG00000018808	trmt1	100	78.401	ENSAMXG00000012026	trmt1	88	78.401	Astyanax_mexicanus
ENSTNIG00000018808	trmt1	98	65.271	ENSBTAG00000019325	TRMT1	81	65.271	Bos_taurus
ENSTNIG00000018808	trmt1	88	41.847	WBGene00006613	trm-1	93	41.847	Caenorhabditis_elegans
ENSTNIG00000018808	trmt1	97	63.763	ENSCJAG00000004566	TRMT1	88	63.763	Callithrix_jacchus
ENSTNIG00000018808	trmt1	99	65.517	ENSCAFG00000017070	TRMT1	91	65.517	Canis_familiaris
ENSTNIG00000018808	trmt1	99	65.398	ENSCAFG00020005397	TRMT1	89	65.398	Canis_lupus_dingo
ENSTNIG00000018808	trmt1	98	65.854	ENSCHIG00000013569	TRMT1	86	65.854	Capra_hircus
ENSTNIG00000018808	trmt1	98	64.049	ENSTSYG00000003207	TRMT1	87	64.049	Carlito_syrichta
ENSTNIG00000018808	trmt1	91	62.335	ENSCAPG00000003355	TRMT1	94	62.335	Cavia_aperea
ENSTNIG00000018808	trmt1	98	65.445	ENSCPOG00000011754	TRMT1	87	65.445	Cavia_porcellus
ENSTNIG00000018808	trmt1	98	63.002	ENSCCAG00000022263	TRMT1	92	63.002	Cebus_capucinus
ENSTNIG00000018808	trmt1	98	66.492	ENSCATG00000039850	TRMT1	87	66.492	Cercocebus_atys
ENSTNIG00000018808	trmt1	79	55.748	ENSCATG00000038220	-	83	55.748	Cercocebus_atys
ENSTNIG00000018808	trmt1	97	66.725	ENSCLAG00000015295	TRMT1	89	64.211	Chinchilla_lanigera
ENSTNIG00000018808	trmt1	81	69.053	ENSCSAG00000006500	TRMT1	89	69.053	Chlorocebus_sabaeus
ENSTNIG00000018808	trmt1	97	70.893	ENSCPBG00000023866	TRMT1	84	70.893	Chrysemys_picta_bellii
ENSTNIG00000018808	trmt1	94	48.551	ENSCING00000002884	-	98	48.551	Ciona_intestinalis
ENSTNIG00000018808	trmt1	91	51.243	ENSCSAVG00000010927	-	100	49.536	Ciona_savignyi
ENSTNIG00000018808	trmt1	94	52.347	ENSCANG00000031650	-	86	52.347	Colobus_angolensis_palliatus
ENSTNIG00000018808	trmt1	98	53.136	ENSCANG00000040631	TRMT1	86	53.136	Colobus_angolensis_palliatus
ENSTNIG00000018808	trmt1	100	63.203	ENSCGRG00001022594	Trmt1	89	63.373	Cricetulus_griseus_chok1gshd
ENSTNIG00000018808	trmt1	100	63.203	ENSCGRG00000017732	Trmt1	88	63.373	Cricetulus_griseus_crigri
ENSTNIG00000018808	trmt1	98	83.774	ENSCSEG00000001643	trmt1	85	85.049	Cynoglossus_semilaevis
ENSTNIG00000018808	trmt1	99	84.561	ENSCVAG00000011886	trmt1	87	84.561	Cyprinodon_variegatus
ENSTNIG00000018808	trmt1	99	77.381	ENSDARG00000010978	trmt1	87	77.381	Danio_rerio
ENSTNIG00000018808	trmt1	88	43.454	ENSDNOG00000048240	-	89	43.454	Dasypus_novemcinctus
ENSTNIG00000018808	trmt1	97	64.161	ENSDORG00000014298	Trmt1	86	64.161	Dipodomys_ordii
ENSTNIG00000018808	trmt1	92	48.507	FBgn0032430	CG6388	91	48.507	Drosophila_melanogaster
ENSTNIG00000018808	trmt1	88	52.600	ENSEBUG00000003449	trmt1	75	52.778	Eptatretus_burgeri
ENSTNIG00000018808	trmt1	98	65.271	ENSEASG00005004050	TRMT1	90	65.271	Equus_asinus_asinus
ENSTNIG00000018808	trmt1	98	65.445	ENSECAG00000016149	TRMT1	90	65.445	Equus_caballus
ENSTNIG00000018808	trmt1	69	56.566	ENSEEUG00000014102	-	100	56.566	Erinaceus_europaeus
ENSTNIG00000018808	trmt1	99	77.470	ENSELUG00000021659	trmt1	86	77.470	Esox_lucius
ENSTNIG00000018808	trmt1	98	65.969	ENSFCAG00000000483	TRMT1	87	65.969	Felis_catus
ENSTNIG00000018808	trmt1	98	64.860	ENSFDAG00000007386	TRMT1	87	64.860	Fukomys_damarensis
ENSTNIG00000018808	trmt1	89	84.942	ENSFHEG00000012865	trmt1	86	84.942	Fundulus_heteroclitus
ENSTNIG00000018808	trmt1	98	71.127	ENSGMOG00000006564	trmt1	99	71.655	Gadus_morhua
ENSTNIG00000018808	trmt1	98	85.009	ENSGAFG00000011862	trmt1	89	85.009	Gambusia_affinis
ENSTNIG00000018808	trmt1	99	78.947	ENSGACG00000000227	trmt1	93	78.947	Gasterosteus_aculeatus
ENSTNIG00000018808	trmt1	97	70.841	ENSGAGG00000016432	TRMT1	84	70.841	Gopherus_agassizii
ENSTNIG00000018808	trmt1	98	66.725	ENSGGOG00000014007	TRMT1	87	66.667	Gorilla_gorilla
ENSTNIG00000018808	trmt1	95	75.185	ENSHBUG00000008821	trmt1	92	75.185	Haplochromis_burtoni
ENSTNIG00000018808	trmt1	98	65.559	ENSHGLG00000015972	TRMT1	87	65.559	Heterocephalus_glaber_female
ENSTNIG00000018808	trmt1	98	61.082	ENSHGLG00100018112	TRMT1	87	61.082	Heterocephalus_glaber_male
ENSTNIG00000018808	trmt1	98	79.754	ENSHCOG00000009447	trmt1	88	79.754	Hippocampus_comes
ENSTNIG00000018808	trmt1	99	75.042	ENSIPUG00000002899	trmt1	86	75.042	Ictalurus_punctatus
ENSTNIG00000018808	trmt1	98	65.559	ENSSTOG00000012531	TRMT1	88	65.559	Ictidomys_tridecemlineatus
ENSTNIG00000018808	trmt1	98	65.217	ENSJJAG00000017154	Trmt1	88	65.217	Jaculus_jaculus
ENSTNIG00000018808	trmt1	100	83.247	ENSKMAG00000011809	trmt1	96	82.281	Kryptolebias_marmoratus
ENSTNIG00000018808	trmt1	100	83.391	ENSLBEG00000012703	trmt1	86	83.391	Labrus_bergylta
ENSTNIG00000018808	trmt1	99	61.996	ENSLACG00000014585	TRMT1	94	61.996	Latimeria_chalumnae
ENSTNIG00000018808	trmt1	98	68.366	ENSLOCG00000006479	trmt1	98	71.043	Lepisosteus_oculatus
ENSTNIG00000018808	trmt1	98	65.620	ENSLAFG00000014072	TRMT1	88	65.620	Loxodonta_africana
ENSTNIG00000018808	trmt1	98	66.492	ENSMFAG00000033143	TRMT1	87	66.492	Macaca_fascicularis
ENSTNIG00000018808	trmt1	98	61.996	ENSMMUG00000001167	TRMT1	87	61.996	Macaca_mulatta
ENSTNIG00000018808	trmt1	98	66.318	ENSMNEG00000037867	TRMT1	87	66.318	Macaca_nemestrina
ENSTNIG00000018808	trmt1	98	66.318	ENSMLEG00000016142	TRMT1	87	66.318	Mandrillus_leucophaeus
ENSTNIG00000018808	trmt1	99	85.814	ENSMAMG00000004357	trmt1	86	85.814	Mastacembelus_armatus
ENSTNIG00000018808	trmt1	98	83.451	ENSMZEG00005014510	trmt1	86	83.451	Maylandia_zebra
ENSTNIG00000018808	trmt1	99	64.828	ENSMAUG00000011134	Trmt1	88	64.828	Mesocricetus_auratus
ENSTNIG00000018808	trmt1	98	66.492	ENSMICG00000000793	TRMT1	86	66.492	Microcebus_murinus
ENSTNIG00000018808	trmt1	98	64.510	ENSMOCG00000015895	Trmt1	86	64.685	Microtus_ochrogaster
ENSTNIG00000018808	trmt1	100	83.944	ENSMMOG00000011097	trmt1	94	83.944	Mola_mola
ENSTNIG00000018808	trmt1	98	68.262	ENSMODG00000011619	TRMT1	92	68.262	Monodelphis_domestica
ENSTNIG00000018808	trmt1	99	65.358	MGP_CAROLIEiJ_G0031304	Trmt1	94	62.449	Mus_caroli
ENSTNIG00000018808	trmt1	99	65.870	ENSMUSG00000001909	Trmt1	94	63.673	Mus_musculus
ENSTNIG00000018808	trmt1	99	65.700	MGP_SPRETEiJ_G0032422	Trmt1	94	63.265	Mus_spretus
ENSTNIG00000018808	trmt1	98	66.492	ENSMPUG00000004210	TRMT1	82	66.492	Mustela_putorius_furo
ENSTNIG00000018808	trmt1	98	66.899	ENSMLUG00000012809	TRMT1	85	66.899	Myotis_lucifugus
ENSTNIG00000018808	trmt1	98	65.620	ENSNGAG00000022486	Trmt1	86	65.620	Nannospalax_galili
ENSTNIG00000018808	trmt1	84	85.758	ENSNBRG00000024376	trmt1	85	85.758	Neolamprologus_brichardi
ENSTNIG00000018808	trmt1	77	67.007	ENSNLEG00000013019	-	84	67.007	Nomascus_leucogenys
ENSTNIG00000018808	trmt1	98	66.904	ENSMEUG00000013756	TRMT1	97	66.904	Notamacropus_eugenii
ENSTNIG00000018808	trmt1	80	76.000	ENSOPRG00000009471	-	71	76.000	Ochotona_princeps
ENSTNIG00000018808	trmt1	97	65.499	ENSODEG00000010323	TRMT1	87	65.499	Octodon_degus
ENSTNIG00000018808	trmt1	99	86.585	ENSONIG00000000400	trmt1	91	87.057	Oreochromis_niloticus
ENSTNIG00000018808	trmt1	81	69.748	ENSOCUG00000021934	TRMT1	90	70.168	Oryctolagus_cuniculus
ENSTNIG00000018808	trmt1	99	79.066	ENSORLG00000020074	trmt1	91	79.066	Oryzias_latipes
ENSTNIG00000018808	trmt1	99	82.837	ENSORLG00020007561	trmt1	90	81.818	Oryzias_latipes_hni
ENSTNIG00000018808	trmt1	99	82.837	ENSORLG00015006547	trmt1	87	82.837	Oryzias_latipes_hsok
ENSTNIG00000018808	trmt1	98	83.656	ENSOMEG00000019343	trmt1	87	83.656	Oryzias_melastigma
ENSTNIG00000018808	trmt1	98	65.043	ENSOGAG00000025576	TRMT1	90	65.217	Otolemur_garnettii
ENSTNIG00000018808	trmt1	98	54.124	ENSOARG00000009397	TRMT1	80	54.087	Ovis_aries
ENSTNIG00000018808	trmt1	98	59.266	ENSPPRG00000012117	TRMT1	87	59.266	Panthera_pardus
ENSTNIG00000018808	trmt1	72	67.944	ENSPTIG00000008833	TRMT1	82	67.944	Panthera_tigris_altaica
ENSTNIG00000018808	trmt1	98	66.725	ENSPTRG00000010557	TRMT1	87	66.667	Pan_troglodytes
ENSTNIG00000018808	trmt1	95	48.592	ENSPTRG00000050421	-	90	48.592	Pan_troglodytes
ENSTNIG00000018808	trmt1	98	66.492	ENSPANG00000009247	TRMT1	87	66.492	Papio_anubis
ENSTNIG00000018808	trmt1	75	56.561	ENSPANG00000034058	-	78	56.561	Papio_anubis
ENSTNIG00000018808	trmt1	99	78.799	ENSPKIG00000005309	trmt1	85	78.799	Paramormyrops_kingsleyae
ENSTNIG00000018808	trmt1	94	58.951	ENSPSIG00000008762	TRMT1	79	58.951	Pelodiscus_sinensis
ENSTNIG00000018808	trmt1	100	82.056	ENSPMGG00000019764	trmt1	91	83.333	Periophthalmus_magnuspinnatus
ENSTNIG00000018808	trmt1	98	65.096	ENSPEMG00000016247	Trmt1	86	65.271	Peromyscus_maniculatus_bairdii
ENSTNIG00000018808	trmt1	98	64.248	ENSPMAG00000004329	trmt1	89	64.248	Petromyzon_marinus
ENSTNIG00000018808	trmt1	98	67.553	ENSPCIG00000019273	TRMT1	88	67.553	Phascolarctos_cinereus
ENSTNIG00000018808	trmt1	99	84.817	ENSPFOG00000008527	trmt1	90	84.817	Poecilia_formosa
ENSTNIG00000018808	trmt1	99	83.770	ENSPLAG00000018788	trmt1	90	85.255	Poecilia_latipinna
ENSTNIG00000018808	trmt1	99	84.642	ENSPMEG00000013120	trmt1	90	84.642	Poecilia_mexicana
ENSTNIG00000018808	trmt1	99	82.699	ENSPREG00000000211	trmt1	87	82.699	Poecilia_reticulata
ENSTNIG00000018808	trmt1	98	66.551	ENSPPYG00000009622	TRMT1	87	66.492	Pongo_abelii
ENSTNIG00000018808	trmt1	98	61.955	ENSPCAG00000003698	TRMT1	88	61.955	Procavia_capensis
ENSTNIG00000018808	trmt1	98	66.667	ENSPCOG00000008653	TRMT1	87	66.667	Propithecus_coquereli
ENSTNIG00000018808	trmt1	97	65.909	ENSPVAG00000015076	TRMT1	87	65.909	Pteropus_vampyrus
ENSTNIG00000018808	trmt1	98	81.162	ENSPNYG00000013960	trmt1	93	81.162	Pundamilia_nyererei
ENSTNIG00000018808	trmt1	99	71.329	ENSPNAG00000024859	trmt1	90	71.329	Pygocentrus_nattereri
ENSTNIG00000018808	trmt1	99	64.334	ENSRNOG00000002914	Trmt1	92	64.334	Rattus_norvegicus
ENSTNIG00000018808	trmt1	94	49.460	ENSRBIG00000037505	-	87	49.460	Rhinopithecus_bieti
ENSTNIG00000018808	trmt1	98	66.667	ENSRBIG00000038324	TRMT1	87	66.667	Rhinopithecus_bieti
ENSTNIG00000018808	trmt1	94	49.101	ENSRROG00000031847	-	86	49.101	Rhinopithecus_roxellana
ENSTNIG00000018808	trmt1	98	66.667	ENSRROG00000028599	TRMT1	87	66.667	Rhinopithecus_roxellana
ENSTNIG00000018808	trmt1	87	37.170	YDR120C	-	92	37.170	Saccharomyces_cerevisiae
ENSTNIG00000018808	trmt1	98	63.700	ENSSBOG00000028861	TRMT1	92	63.700	Saimiri_boliviensis_boliviensis
ENSTNIG00000018808	trmt1	98	68.607	ENSSHAG00000014381	TRMT1	95	67.764	Sarcophilus_harrisii
ENSTNIG00000018808	trmt1	98	79.649	ENSSFOG00015004139	trmt1	84	79.649	Scleropages_formosus
ENSTNIG00000018808	trmt1	99	83.765	ENSSMAG00000021136	trmt1	87	83.477	Scophthalmus_maximus
ENSTNIG00000018808	trmt1	99	86.237	ENSSDUG00000012740	trmt1	86	86.237	Seriola_dumerili
ENSTNIG00000018808	trmt1	99	86.237	ENSSLDG00000005971	trmt1	86	86.237	Seriola_lalandi_dorsalis
ENSTNIG00000018808	trmt1	88	65.116	ENSSARG00000005138	TRMT1	91	65.116	Sorex_araneus
ENSTNIG00000018808	trmt1	97	52.381	ENSSPUG00000001084	TRMT1	89	52.817	Sphenodon_punctatus
ENSTNIG00000018808	trmt1	99	84.063	ENSSPAG00000007153	trmt1	95	84.063	Stegastes_partitus
ENSTNIG00000018808	trmt1	98	65.849	ENSSSCG00000013744	TRMT1	90	65.849	Sus_scrofa
ENSTNIG00000018808	trmt1	98	85.366	ENSTRUG00000010700	trmt1	87	85.540	Takifugu_rubripes
ENSTNIG00000018808	trmt1	98	63.002	ENSTTRG00000006379	TRMT1	87	63.002	Tursiops_truncatus
ENSTNIG00000018808	trmt1	98	65.969	ENSUAMG00000022911	TRMT1	94	62.976	Ursus_americanus
ENSTNIG00000018808	trmt1	98	65.620	ENSUMAG00000006027	TRMT1	90	65.620	Ursus_maritimus
ENSTNIG00000018808	trmt1	99	65.690	ENSVVUG00000024177	TRMT1	87	65.690	Vulpes_vulpes
ENSTNIG00000018808	trmt1	79	68.764	ENSXETG00000033863	TRMT1	92	68.764	Xenopus_tropicalis
ENSTNIG00000018808	trmt1	99	85.589	ENSXCOG00000015733	trmt1	89	85.589	Xiphophorus_couchianus
ENSTNIG00000018808	trmt1	97	85.561	ENSXMAG00000013823	trmt1	97	85.740	Xiphophorus_maculatus