EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000018856 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4769 bases
Position: chr12:12004921-12009689
Accession: ZDB-GENE-030131-378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000022041	DZF	PF07528.14	1.4e-72	1	1
ENSTNIP00000022041	zf-met	PF12874.7	6.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022277	-	1758	-	ENSTNIP00000022041	585 (aa)	-	H3DNE2

Gene Model

Click here to download ENSTNIG00000018856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000018856	zfr	58	47.107	ENSTNIG00000016730	-	53	47.107
ENSTNIG00000018856	zfr	88	59.116	ENSTNIG00000015507	zfr2	52	59.116
ENSTNIG00000018856	zfr	52	50.915	ENSTNIG00000004947	strbp	56	51.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018856	zfr	98	72.391	ENSG00000056097	ZFR	99	69.061	Homo_sapiens
ENSTNIG00000018856	zfr	95	78.411	ENSAPOG00000009740	zfr	54	78.883	Acanthochromis_polyacanthus
ENSTNIG00000018856	zfr	98	72.007	ENSAMEG00000006184	ZFR	55	73.524	Ailuropoda_melanoleuca
ENSTNIG00000018856	zfr	100	79.803	ENSACIG00000015926	zfr	60	81.095	Amphilophus_citrinellus
ENSTNIG00000018856	zfr	100	74.056	ENSAOCG00000013876	zfr	55	75.290	Amphiprion_ocellaris
ENSTNIG00000018856	zfr	100	80.131	ENSAPEG00000024383	zfr	56	81.426	Amphiprion_percula
ENSTNIG00000018856	zfr	100	80.952	ENSATEG00000010271	zfr	56	82.421	Anabas_testudineus
ENSTNIG00000018856	zfr	66	61.557	ENSAPLG00000015627	-	50	63.990	Anas_platyrhynchos
ENSTNIG00000018856	zfr	96	72.696	ENSACAG00000007880	ZFR	54	74.232	Anolis_carolinensis
ENSTNIG00000018856	zfr	98	72.391	ENSANAG00000023333	ZFR	56	73.906	Aotus_nancymaae
ENSTNIG00000018856	zfr	100	79.475	ENSACLG00000016832	zfr	60	80.929	Astatotilapia_calliptera
ENSTNIG00000018856	zfr	98	77.909	ENSAMXG00000019511	zfr	56	78.752	Astyanax_mexicanus
ENSTNIG00000018856	zfr	98	72.681	ENSBTAG00000008414	ZFR	55	74.199	Bos_taurus
ENSTNIG00000018856	zfr	98	72.391	ENSCJAG00000018740	ZFR	59	73.906	Callithrix_jacchus
ENSTNIG00000018856	zfr	98	68.960	ENSCAFG00000018886	ZFR	55	70.470	Canis_familiaris
ENSTNIG00000018856	zfr	98	72.222	ENSCAFG00020016859	-	59	73.737	Canis_lupus_dingo
ENSTNIG00000018856	zfr	99	71.546	ENSCHIG00000007710	ZFR	56	73.026	Capra_hircus
ENSTNIG00000018856	zfr	98	72.559	ENSTSYG00000010670	ZFR	56	74.074	Carlito_syrichta
ENSTNIG00000018856	zfr	98	59.727	ENSCAPG00000015655	ZFR	58	61.179	Cavia_aperea
ENSTNIG00000018856	zfr	98	68.048	ENSCPOG00000000862	ZFR	55	69.775	Cavia_porcellus
ENSTNIG00000018856	zfr	98	72.559	ENSCCAG00000024473	ZFR	56	74.074	Cebus_capucinus
ENSTNIG00000018856	zfr	98	72.391	ENSCATG00000038311	ZFR	56	73.906	Cercocebus_atys
ENSTNIG00000018856	zfr	98	72.727	ENSCLAG00000007408	ZFR	57	74.242	Chinchilla_lanigera
ENSTNIG00000018856	zfr	98	72.222	ENSCSAG00000017180	ZFR	55	73.737	Chlorocebus_sabaeus
ENSTNIG00000018856	zfr	86	64.543	ENSCHOG00000003848	ZFR	52	64.543	Choloepus_hoffmanni
ENSTNIG00000018856	zfr	98	71.786	ENSCPBG00000024211	ZFR	54	74.363	Chrysemys_picta_bellii
ENSTNIG00000018856	zfr	98	72.391	ENSCANG00000017807	ZFR	56	73.906	Colobus_angolensis_palliatus
ENSTNIG00000018856	zfr	98	72.727	ENSCGRG00001016009	Zfr	55	74.242	Cricetulus_griseus_chok1gshd
ENSTNIG00000018856	zfr	98	72.727	ENSCGRG00000001228	Zfr	56	74.242	Cricetulus_griseus_crigri
ENSTNIG00000018856	zfr	99	78.947	ENSCSEG00000009224	zfr	60	80.399	Cynoglossus_semilaevis
ENSTNIG00000018856	zfr	99	76.645	ENSCSEG00000011169	ZFR	59	77.907	Cynoglossus_semilaevis
ENSTNIG00000018856	zfr	99	77.704	ENSCVAG00000016494	zfr	61	79.070	Cyprinodon_variegatus
ENSTNIG00000018856	zfr	96	76.871	ENSDARG00000027109	zfr	58	75.767	Danio_rerio
ENSTNIG00000018856	zfr	99	71.642	ENSDNOG00000008852	ZFR	56	73.134	Dasypus_novemcinctus
ENSTNIG00000018856	zfr	98	71.743	ENSDORG00000016643	Zfr	55	73.266	Dipodomys_ordii
ENSTNIG00000018856	zfr	96	64.736	ENSETEG00000008937	ZFR	54	66.269	Echinops_telfairi
ENSTNIG00000018856	zfr	88	58.692	ENSEBUG00000012503	-	94	58.692	Eptatretus_burgeri
ENSTNIG00000018856	zfr	98	72.054	ENSEASG00005007104	ZFR	55	73.569	Equus_asinus_asinus
ENSTNIG00000018856	zfr	97	74.457	ENSELUG00000022743	zfr	58	75.793	Esox_lucius
ENSTNIG00000018856	zfr	98	72.222	ENSFCAG00000000354	ZFR	55	73.737	Felis_catus
ENSTNIG00000018856	zfr	99	71.761	ENSFALG00000002149	ZFR	57	73.256	Ficedula_albicollis
ENSTNIG00000018856	zfr	98	72.559	ENSFDAG00000012993	ZFR	56	74.074	Fukomys_damarensis
ENSTNIG00000018856	zfr	96	76.256	ENSFHEG00000012064	zfr	92	77.069	Fundulus_heteroclitus
ENSTNIG00000018856	zfr	95	74.093	ENSGMOG00000003967	zfr	57	73.641	Gadus_morhua
ENSTNIG00000018856	zfr	98	71.886	ENSGALG00000034488	-	55	72.559	Gallus_gallus
ENSTNIG00000018856	zfr	99	71.262	ENSGALG00000003235	-	56	72.757	Gallus_gallus
ENSTNIG00000018856	zfr	80	89.147	ENSGAFG00000016229	zfr	53	89.147	Gambusia_affinis
ENSTNIG00000018856	zfr	98	78.814	ENSGACG00000005045	zfr	58	79.768	Gasterosteus_aculeatus
ENSTNIG00000018856	zfr	86	70.833	ENSGAGG00000013544	ZFR	51	72.538	Gopherus_agassizii
ENSTNIG00000018856	zfr	98	72.391	ENSGGOG00000016302	ZFR	56	73.906	Gorilla_gorilla
ENSTNIG00000018856	zfr	98	72.896	ENSHGLG00000008088	ZFR	56	74.411	Heterocephalus_glaber_female
ENSTNIG00000018856	zfr	98	72.896	ENSHGLG00100016776	ZFR	56	74.411	Heterocephalus_glaber_male
ENSTNIG00000018856	zfr	100	75.450	ENSHCOG00000001548	zfr	56	75.941	Hippocampus_comes
ENSTNIG00000018856	zfr	96	79.038	ENSIPUG00000008192	zfr	55	79.089	Ictalurus_punctatus
ENSTNIG00000018856	zfr	98	72.559	ENSSTOG00000008742	ZFR	56	74.074	Ictidomys_tridecemlineatus
ENSTNIG00000018856	zfr	98	65.657	ENSJJAG00000023064	Zfr	54	67.340	Jaculus_jaculus
ENSTNIG00000018856	zfr	80	79.713	ENSKMAG00000009468	zfr	50	80.282	Kryptolebias_marmoratus
ENSTNIG00000018856	zfr	95	79.352	ENSLBEG00000010783	zfr	57	78.667	Labrus_bergylta
ENSTNIG00000018856	zfr	98	69.244	ENSLACG00000000831	ZFR	55	70.638	Latimeria_chalumnae
ENSTNIG00000018856	zfr	96	78.120	ENSLOCG00000006727	zfr	53	78.974	Lepisosteus_oculatus
ENSTNIG00000018856	zfr	98	72.007	ENSLAFG00000002308	ZFR	59	73.154	Loxodonta_africana
ENSTNIG00000018856	zfr	98	72.391	ENSMFAG00000042691	ZFR	56	73.906	Macaca_fascicularis
ENSTNIG00000018856	zfr	98	72.391	ENSMMUG00000001317	ZFR	55	73.906	Macaca_mulatta
ENSTNIG00000018856	zfr	98	72.391	ENSMNEG00000029441	ZFR	58	73.906	Macaca_nemestrina
ENSTNIG00000018856	zfr	98	72.391	ENSMLEG00000028503	ZFR	57	73.906	Mandrillus_leucophaeus
ENSTNIG00000018856	zfr	100	79.602	ENSMAMG00000017351	zfr	60	80.431	Mastacembelus_armatus
ENSTNIG00000018856	zfr	100	79.475	ENSMZEG00005021243	zfr	60	80.929	Maylandia_zebra
ENSTNIG00000018856	zfr	99	62.957	ENSMGAG00000002841	ZFR	58	64.452	Meleagris_gallopavo
ENSTNIG00000018856	zfr	98	72.896	ENSMAUG00000000976	Zfr	55	73.569	Mesocricetus_auratus
ENSTNIG00000018856	zfr	98	72.391	ENSMICG00000001244	ZFR	55	73.906	Microcebus_murinus
ENSTNIG00000018856	zfr	98	72.391	ENSMOCG00000018630	Zfr	55	73.906	Microtus_ochrogaster
ENSTNIG00000018856	zfr	95	83.538	ENSMMOG00000012585	zfr	58	82.624	Mola_mola
ENSTNIG00000018856	zfr	98	73.051	ENSMODG00000020412	ZFR	55	74.576	Monodelphis_domestica
ENSTNIG00000018856	zfr	96	80.205	ENSMALG00000007123	zfr	55	81.724	Monopterus_albus
ENSTNIG00000018856	zfr	98	72.222	MGP_CAROLIEiJ_G0019681	Zfr	100	76.174	Mus_caroli
ENSTNIG00000018856	zfr	98	72.222	ENSMUSG00000022201	Zfr	99	76.174	Mus_musculus
ENSTNIG00000018856	zfr	98	72.559	MGP_PahariEiJ_G0016057	Zfr	100	76.510	Mus_pahari
ENSTNIG00000018856	zfr	98	72.391	MGP_SPRETEiJ_G0020574	Zfr	100	76.510	Mus_spretus
ENSTNIG00000018856	zfr	99	70.936	ENSMLUG00000011797	ZFR	57	73.569	Myotis_lucifugus
ENSTNIG00000018856	zfr	98	72.559	ENSNGAG00000018328	Zfr	55	74.074	Nannospalax_galili
ENSTNIG00000018856	zfr	100	74.304	ENSNBRG00000008378	zfr	60	75.702	Neolamprologus_brichardi
ENSTNIG00000018856	zfr	98	72.222	ENSNLEG00000014098	ZFR	57	73.737	Nomascus_leucogenys
ENSTNIG00000018856	zfr	98	63.559	ENSMEUG00000010225	ZFR	57	65.085	Notamacropus_eugenii
ENSTNIG00000018856	zfr	98	71.886	ENSODEG00000001990	ZFR	57	73.401	Octodon_degus
ENSTNIG00000018856	zfr	98	72.589	ENSOANG00000014434	ZFR	57	74.579	Ornithorhynchus_anatinus
ENSTNIG00000018856	zfr	99	71.714	ENSOCUG00000016737	ZFR	55	73.906	Oryctolagus_cuniculus
ENSTNIG00000018856	zfr	99	80.235	ENSORLG00000017243	zfr	58	79.402	Oryzias_latipes
ENSTNIG00000018856	zfr	99	80.402	ENSORLG00020014823	zfr	56	80.905	Oryzias_latipes_hni
ENSTNIG00000018856	zfr	97	78.904	ENSORLG00015005801	zfr	56	80.570	Oryzias_latipes_hsok
ENSTNIG00000018856	zfr	99	80.301	ENSOMEG00000003336	zfr	56	81.135	Oryzias_melastigma
ENSTNIG00000018856	zfr	98	68.739	ENSOGAG00000015117	ZFR	55	70.252	Otolemur_garnettii
ENSTNIG00000018856	zfr	99	71.546	ENSOARG00000012233	ZFR	59	73.026	Ovis_aries
ENSTNIG00000018856	zfr	98	72.391	ENSPPAG00000027447	ZFR	57	73.906	Pan_paniscus
ENSTNIG00000018856	zfr	98	72.054	ENSPPRG00000008253	ZFR	55	73.569	Panthera_pardus
ENSTNIG00000018856	zfr	98	72.054	ENSPTIG00000010038	ZFR	55	73.569	Panthera_tigris_altaica
ENSTNIG00000018856	zfr	98	72.391	ENSPTRG00000016771	ZFR	56	73.906	Pan_troglodytes
ENSTNIG00000018856	zfr	98	72.391	ENSPANG00000003729	ZFR	56	73.906	Papio_anubis
ENSTNIG00000018856	zfr	100	69.256	ENSPKIG00000007596	ZFR	60	70.962	Paramormyrops_kingsleyae
ENSTNIG00000018856	zfr	100	75.658	ENSPKIG00000016781	ZFR	61	76.480	Paramormyrops_kingsleyae
ENSTNIG00000018856	zfr	91	74.503	ENSPSIG00000005779	ZFR	99	75.993	Pelodiscus_sinensis
ENSTNIG00000018856	zfr	84	75.734	ENSPMGG00000015984	zfr	51	77.030	Periophthalmus_magnuspinnatus
ENSTNIG00000018856	zfr	91	70.036	ENSPEMG00000014573	Zfr	52	71.661	Peromyscus_maniculatus_bairdii
ENSTNIG00000018856	zfr	98	73.390	ENSPCIG00000020906	ZFR	58	74.915	Phascolarctos_cinereus
ENSTNIG00000018856	zfr	99	78.773	ENSPFOG00000005931	zfr	56	80.201	Poecilia_formosa
ENSTNIG00000018856	zfr	55	72.334	ENSPLAG00000001158	zfr	72	73.547	Poecilia_latipinna
ENSTNIG00000018856	zfr	55	72.622	ENSPMEG00000001926	zfr	69	74.194	Poecilia_mexicana
ENSTNIG00000018856	zfr	99	78.073	ENSPREG00000011947	zfr	56	79.530	Poecilia_reticulata
ENSTNIG00000018856	zfr	98	71.791	ENSPPYG00000015378	ZFR	57	73.064	Pongo_abelii
ENSTNIG00000018856	zfr	98	59.764	ENSPCAG00000007277	ZFR	55	61.279	Procavia_capensis
ENSTNIG00000018856	zfr	88	71.243	ENSPCOG00000000045	ZFR	52	72.913	Propithecus_coquereli
ENSTNIG00000018856	zfr	100	79.475	ENSPNYG00000006239	zfr	60	80.929	Pundamilia_nyererei
ENSTNIG00000018856	zfr	98	78.547	ENSPNAG00000025151	zfr	59	79.392	Pygocentrus_nattereri
ENSTNIG00000018856	zfr	98	72.222	ENSRNOG00000011627	Zfr	100	82.946	Rattus_norvegicus
ENSTNIG00000018856	zfr	98	72.391	ENSRBIG00000041561	ZFR	56	73.906	Rhinopithecus_bieti
ENSTNIG00000018856	zfr	98	72.391	ENSRROG00000044008	ZFR	56	73.906	Rhinopithecus_roxellana
ENSTNIG00000018856	zfr	98	72.054	ENSSBOG00000024150	ZFR	57	73.569	Saimiri_boliviensis_boliviensis
ENSTNIG00000018856	zfr	98	73.220	ENSSHAG00000015478	ZFR	63	71.821	Sarcophilus_harrisii
ENSTNIG00000018856	zfr	96	77.080	ENSSFOG00015017300	ZFR	56	78.388	Scleropages_formosus
ENSTNIG00000018856	zfr	100	79.445	ENSSMAG00000000320	zfr	60	80.890	Scophthalmus_maximus
ENSTNIG00000018856	zfr	99	81.561	ENSSDUG00000013882	zfr	56	82.392	Seriola_dumerili
ENSTNIG00000018856	zfr	99	81.894	ENSSLDG00000000762	zfr	60	82.724	Seriola_lalandi_dorsalis
ENSTNIG00000018856	zfr	98	71.886	ENSSPUG00000016786	ZFR	57	73.401	Sphenodon_punctatus
ENSTNIG00000018856	zfr	100	80.460	ENSSPAG00000019293	zfr	56	81.758	Stegastes_partitus
ENSTNIG00000018856	zfr	98	72.054	ENSSSCG00000027681	ZFR	59	73.569	Sus_scrofa
ENSTNIG00000018856	zfr	99	71.192	ENSTGUG00000001909	ZFR	56	72.682	Taeniopygia_guttata
ENSTNIG00000018856	zfr	100	86.288	ENSTRUG00000016620	zfr	56	86.789	Takifugu_rubripes
ENSTNIG00000018856	zfr	88	71.478	ENSTBEG00000017687	ZFR	55	54.958	Tupaia_belangeri
ENSTNIG00000018856	zfr	98	68.855	ENSTTRG00000017321	ZFR	55	70.370	Tursiops_truncatus
ENSTNIG00000018856	zfr	98	72.344	ENSVPAG00000011011	ZFR	55	73.862	Vicugna_pacos
ENSTNIG00000018856	zfr	98	72.222	ENSVVUG00000022171	-	55	73.737	Vulpes_vulpes
ENSTNIG00000018856	zfr	96	72.384	ENSXETG00000015598	zfr	57	73.311	Xenopus_tropicalis
ENSTNIG00000018856	zfr	99	78.405	ENSXCOG00000009361	zfr	56	80.034	Xiphophorus_couchianus
ENSTNIG00000018856	zfr	99	78.571	ENSXMAG00000013356	zfr	56	80.201	Xiphophorus_maculatus