EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000018898 (Gene tree)
Gene ID: -
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 6002 bases
Position: chr2:8649202-8655203
Accession: ZDB-GENE-070803-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000022085	TUDOR	PF00567.24	3.4e-63	1	3
ENSTNIP00000022085	TUDOR	PF00567.24	3.4e-63	2	3
ENSTNIP00000022085	TUDOR	PF00567.24	3.4e-63	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022321	-	2289	-	ENSTNIP00000022085	763 (aa)	-	H3DNI6

Gene Model

Click here to download ENSTNIG00000018898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018898	tdrd1	100	34.988	ENSG00000095627	TDRD1	80	46.377	Homo_sapiens
ENSTNIG00000018898	tdrd1	100	49.836	ENSAPOG00000023199	tdrd1	85	48.964	Acanthochromis_polyacanthus
ENSTNIG00000018898	tdrd1	100	33.750	ENSAMEG00000015182	TDRD1	76	33.750	Ailuropoda_melanoleuca
ENSTNIG00000018898	tdrd1	100	61.055	ENSACIG00000010576	tdrd1	79	61.055	Amphilophus_citrinellus
ENSTNIG00000018898	tdrd1	99	52.894	ENSAOCG00000007059	tdrd1	78	52.976	Amphiprion_ocellaris
ENSTNIG00000018898	tdrd1	100	51.495	ENSAPEG00000017049	tdrd1	82	50.055	Amphiprion_percula
ENSTNIG00000018898	tdrd1	100	50.273	ENSATEG00000021627	tdrd1	82	50.055	Anabas_testudineus
ENSTNIG00000018898	tdrd1	100	35.537	ENSACAG00000009854	TDRD1	81	47.826	Anolis_carolinensis
ENSTNIG00000018898	tdrd1	100	36.160	ENSANAG00000035710	TDRD1	79	36.160	Aotus_nancymaae
ENSTNIG00000018898	tdrd1	100	47.855	ENSACLG00000014107	tdrd1	78	45.875	Astatotilapia_calliptera
ENSTNIG00000018898	tdrd1	100	40.698	ENSAMXG00000015146	tdrd1	78	40.698	Astyanax_mexicanus
ENSTNIG00000018898	tdrd1	100	32.353	ENSBTAG00000006855	TDRD1	81	46.269	Bos_taurus
ENSTNIG00000018898	tdrd1	100	39.604	ENSCJAG00000019270	TDRD1	80	46.377	Callithrix_jacchus
ENSTNIG00000018898	tdrd1	100	34.034	ENSCAFG00000011266	TDRD1	82	34.483	Canis_familiaris
ENSTNIG00000018898	tdrd1	100	34.034	ENSCAFG00020012373	TDRD1	82	34.483	Canis_lupus_dingo
ENSTNIG00000018898	tdrd1	100	34.034	ENSCHIG00000012766	TDRD1	82	46.269	Capra_hircus
ENSTNIG00000018898	tdrd1	100	33.750	ENSTSYG00000004935	TDRD1	80	33.750	Carlito_syrichta
ENSTNIG00000018898	tdrd1	100	35.294	ENSCPOG00000004190	TDRD1	79	34.874	Cavia_porcellus
ENSTNIG00000018898	tdrd1	100	35.075	ENSCCAG00000027375	TDRD1	80	46.377	Cebus_capucinus
ENSTNIG00000018898	tdrd1	100	38.614	ENSCATG00000035999	TDRD1	83	46.377	Cercocebus_atys
ENSTNIG00000018898	tdrd1	100	36.134	ENSCLAG00000003935	TDRD1	78	46.269	Chinchilla_lanigera
ENSTNIG00000018898	tdrd1	100	34.837	ENSCSAG00000005071	TDRD1	79	46.377	Chlorocebus_sabaeus
ENSTNIG00000018898	tdrd1	99	39.604	ENSCHOG00000001690	TDRD1	69	46.269	Choloepus_hoffmanni
ENSTNIG00000018898	tdrd1	100	31.845	ENSCPBG00000003780	TDRD1	77	31.845	Chrysemys_picta_bellii
ENSTNIG00000018898	tdrd1	100	46.377	ENSCANG00000035172	TDRD1	81	46.377	Colobus_angolensis_palliatus
ENSTNIG00000018898	tdrd1	100	34.663	ENSCGRG00001004632	Tdrd1	83	34.663	Cricetulus_griseus_chok1gshd
ENSTNIG00000018898	tdrd1	100	32.658	ENSCGRG00000004981	Tdrd1	78	32.658	Cricetulus_griseus_crigri
ENSTNIG00000018898	tdrd1	100	41.183	ENSCSEG00000006983	tdrd1	84	48.462	Cynoglossus_semilaevis
ENSTNIG00000018898	tdrd1	99	47.082	ENSCVAG00000020980	tdrd1	84	46.693	Cyprinodon_variegatus
ENSTNIG00000018898	tdrd1	100	39.038	ENSDARG00000007465	tdrd1	77	39.174	Danio_rerio
ENSTNIG00000018898	tdrd1	100	33.090	ENSDNOG00000012114	TDRD1	76	34.375	Dasypus_novemcinctus
ENSTNIG00000018898	tdrd1	100	35.294	ENSDORG00000009986	Tdrd1	81	44.776	Dipodomys_ordii
ENSTNIG00000018898	tdrd1	100	33.750	ENSEASG00005014802	TDRD1	81	33.750	Equus_asinus_asinus
ENSTNIG00000018898	tdrd1	100	34.000	ENSECAG00000009748	TDRD1	76	34.000	Equus_caballus
ENSTNIG00000018898	tdrd1	100	34.545	ENSEEUG00000010076	TDRD1	78	32.727	Erinaceus_europaeus
ENSTNIG00000018898	tdrd1	100	39.172	ENSELUG00000024364	tdrd1	83	39.811	Esox_lucius
ENSTNIG00000018898	tdrd1	100	30.726	ENSFCAG00000000632	TDRD1	79	30.726	Felis_catus
ENSTNIG00000018898	tdrd1	88	34.746	ENSFALG00000002237	TDRD1	91	44.928	Ficedula_albicollis
ENSTNIG00000018898	tdrd1	100	33.911	ENSFDAG00000013225	TDRD1	79	33.911	Fukomys_damarensis
ENSTNIG00000018898	tdrd1	100	46.960	ENSFHEG00000009203	tdrd1	80	46.506	Fundulus_heteroclitus
ENSTNIG00000018898	tdrd1	88	51.402	ENSGMOG00000016797	-	69	51.402	Gadus_morhua
ENSTNIG00000018898	tdrd1	100	36.170	ENSGALG00000046180	TDRD1	87	44.776	Gallus_gallus
ENSTNIG00000018898	tdrd1	100	44.273	ENSGAFG00000002668	tdrd1	82	44.309	Gambusia_affinis
ENSTNIG00000018898	tdrd1	90	50.123	ENSGACG00000006590	tdrd1	100	48.529	Gasterosteus_aculeatus
ENSTNIG00000018898	tdrd1	100	38.614	ENSGGOG00000004250	TDRD1	79	46.377	Gorilla_gorilla
ENSTNIG00000018898	tdrd1	100	48.185	ENSHBUG00000005216	tdrd1	91	46.366	Haplochromis_burtoni
ENSTNIG00000018898	tdrd1	100	32.603	ENSHGLG00000010877	TDRD1	79	33.824	Heterocephalus_glaber_female
ENSTNIG00000018898	tdrd1	100	33.167	ENSHGLG00100013857	TDRD1	84	46.269	Heterocephalus_glaber_male
ENSTNIG00000018898	tdrd1	100	58.993	ENSHCOG00000002840	tdrd1	74	57.554	Hippocampus_comes
ENSTNIG00000018898	tdrd1	100	42.803	ENSIPUG00000017232	tdrd1	83	42.088	Ictalurus_punctatus
ENSTNIG00000018898	tdrd1	100	33.250	ENSSTOG00000003221	TDRD1	81	44.776	Ictidomys_tridecemlineatus
ENSTNIG00000018898	tdrd1	100	35.049	ENSJJAG00000014720	Tdrd1	79	47.826	Jaculus_jaculus
ENSTNIG00000018898	tdrd1	100	52.632	ENSKMAG00000018558	tdrd1	87	52.256	Kryptolebias_marmoratus
ENSTNIG00000018898	tdrd1	100	59.865	ENSLBEG00000004161	tdrd1	74	60.034	Labrus_bergylta
ENSTNIG00000018898	tdrd1	100	41.379	ENSLACG00000011559	TDRD1	80	44.928	Latimeria_chalumnae
ENSTNIG00000018898	tdrd1	100	34.127	ENSLOCG00000012030	tdrd1	100	43.478	Lepisosteus_oculatus
ENSTNIG00000018898	tdrd1	89	30.233	ENSLAFG00000011575	TDRD1	93	30.233	Loxodonta_africana
ENSTNIG00000018898	tdrd1	100	38.614	ENSMFAG00000043487	TDRD1	81	46.377	Macaca_fascicularis
ENSTNIG00000018898	tdrd1	100	38.614	ENSMMUG00000022517	TDRD1	81	46.377	Macaca_mulatta
ENSTNIG00000018898	tdrd1	100	38.614	ENSMNEG00000031108	TDRD1	81	46.377	Macaca_nemestrina
ENSTNIG00000018898	tdrd1	100	38.614	ENSMLEG00000032281	TDRD1	81	46.377	Mandrillus_leucophaeus
ENSTNIG00000018898	tdrd1	100	48.429	ENSMAMG00000015287	tdrd1	86	48.292	Mastacembelus_armatus
ENSTNIG00000018898	tdrd1	100	47.755	ENSMZEG00005025315	tdrd1	78	46.865	Maylandia_zebra
ENSTNIG00000018898	tdrd1	100	43.662	ENSMGAG00000011067	TDRD1	98	44.776	Meleagris_gallopavo
ENSTNIG00000018898	tdrd1	89	37.255	ENSMAUG00000012164	Tdrd1	78	37.255	Mesocricetus_auratus
ENSTNIG00000018898	tdrd1	100	34.901	ENSMICG00000016190	TDRD1	81	46.269	Microcebus_murinus
ENSTNIG00000018898	tdrd1	100	33.666	ENSMOCG00000022360	Tdrd1	79	33.416	Microtus_ochrogaster
ENSTNIG00000018898	tdrd1	100	48.855	ENSMMOG00000014068	tdrd1	86	50.382	Mola_mola
ENSTNIG00000018898	tdrd1	100	37.931	ENSMODG00000009788	TDRD1	79	44.928	Monodelphis_domestica
ENSTNIG00000018898	tdrd1	100	53.612	ENSMALG00000022115	tdrd1	83	53.232	Monopterus_albus
ENSTNIG00000018898	tdrd1	100	33.499	MGP_CAROLIEiJ_G0023095	Tdrd1	79	36.765	Mus_caroli
ENSTNIG00000018898	tdrd1	100	33.995	ENSMUSG00000025081	Tdrd1	79	36.765	Mus_musculus
ENSTNIG00000018898	tdrd1	100	39.855	MGP_PahariEiJ_G0014583	Tdrd1	81	39.130	Mus_pahari
ENSTNIG00000018898	tdrd1	100	33.747	MGP_SPRETEiJ_G0024016	Tdrd1	79	38.235	Mus_spretus
ENSTNIG00000018898	tdrd1	100	33.666	ENSNGAG00000015231	Tdrd1	81	47.761	Nannospalax_galili
ENSTNIG00000018898	tdrd1	99	60.560	ENSNBRG00000017920	tdrd1	91	60.560	Neolamprologus_brichardi
ENSTNIG00000018898	tdrd1	100	37.624	ENSNLEG00000016228	TDRD1	80	44.928	Nomascus_leucogenys
ENSTNIG00000018898	tdrd1	100	32.170	ENSOPRG00000009180	TDRD1	78	36.145	Ochotona_princeps
ENSTNIG00000018898	tdrd1	100	32.609	ENSODEG00000011965	TDRD1	76	32.609	Octodon_degus
ENSTNIG00000018898	tdrd1	100	48.492	ENSONIG00000016382	tdrd1	81	46.417	Oreochromis_niloticus
ENSTNIG00000018898	tdrd1	100	34.454	ENSOCUG00000025327	TDRD1	79	39.394	Oryctolagus_cuniculus
ENSTNIG00000018898	tdrd1	100	49.035	ENSORLG00000004833	tdrd1	79	48.000	Oryzias_latipes
ENSTNIG00000018898	tdrd1	100	45.016	ENSORLG00020019231	tdrd1	85	49.219	Oryzias_latipes_hni
ENSTNIG00000018898	tdrd1	100	51.969	ENSORLG00015017184	tdrd1	79	50.787	Oryzias_latipes_hsok
ENSTNIG00000018898	tdrd1	100	45.952	ENSOMEG00000023637	tdrd1	77	45.348	Oryzias_melastigma
ENSTNIG00000018898	tdrd1	100	46.269	ENSOGAG00000001370	TDRD1	85	46.269	Otolemur_garnettii
ENSTNIG00000018898	tdrd1	100	33.613	ENSOARG00000014200	-	79	46.269	Ovis_aries
ENSTNIG00000018898	tdrd1	100	34.491	ENSPPAG00000041621	TDRD1	79	46.377	Pan_paniscus
ENSTNIG00000018898	tdrd1	100	33.588	ENSPPRG00000000191	TDRD1	79	33.588	Panthera_pardus
ENSTNIG00000018898	tdrd1	100	32.639	ENSPTIG00000010264	TDRD1	80	32.639	Panthera_tigris_altaica
ENSTNIG00000018898	tdrd1	100	34.491	ENSPTRG00000002958	TDRD1	79	46.377	Pan_troglodytes
ENSTNIG00000018898	tdrd1	100	38.614	ENSPANG00000020752	TDRD1	83	46.377	Papio_anubis
ENSTNIG00000018898	tdrd1	100	45.070	ENSPKIG00000010586	tdrd1	80	44.928	Paramormyrops_kingsleyae
ENSTNIG00000018898	tdrd1	99	51.654	ENSPMGG00000018890	tdrd1	95	51.654	Periophthalmus_magnuspinnatus
ENSTNIG00000018898	tdrd1	100	34.000	ENSPEMG00000004582	Tdrd1	79	36.765	Peromyscus_maniculatus_bairdii
ENSTNIG00000018898	tdrd1	59	34.783	ENSPMAG00000004416	-	99	46.970	Petromyzon_marinus
ENSTNIG00000018898	tdrd1	100	36.975	ENSPCIG00000009739	TDRD1	81	44.928	Phascolarctos_cinereus
ENSTNIG00000018898	tdrd1	98	44.870	ENSPFOG00000002145	tdrd1	85	44.758	Poecilia_formosa
ENSTNIG00000018898	tdrd1	100	55.584	ENSPLAG00000010241	tdrd1	79	55.584	Poecilia_latipinna
ENSTNIG00000018898	tdrd1	100	44.939	ENSPMEG00000021893	tdrd1	81	44.828	Poecilia_mexicana
ENSTNIG00000018898	tdrd1	100	45.404	ENSPREG00000022663	tdrd1	81	45.293	Poecilia_reticulata
ENSTNIG00000018898	tdrd1	100	31.415	ENSPPYG00000002671	TDRD1	78	31.185	Pongo_abelii
ENSTNIG00000018898	tdrd1	100	41.538	ENSPCAG00000006692	TDRD1	69	41.538	Procavia_capensis
ENSTNIG00000018898	tdrd1	100	39.604	ENSPCOG00000026619	TDRD1	79	46.269	Propithecus_coquereli
ENSTNIG00000018898	tdrd1	99	47.687	ENSPNYG00000001706	tdrd1	79	45.925	Pundamilia_nyererei
ENSTNIG00000018898	tdrd1	100	38.735	ENSPNAG00000005831	tdrd1	80	40.156	Pygocentrus_nattereri
ENSTNIG00000018898	tdrd1	100	36.765	ENSRNOG00000017064	Tdrd1	79	36.765	Rattus_norvegicus
ENSTNIG00000018898	tdrd1	100	38.614	ENSRBIG00000029668	TDRD1	82	46.377	Rhinopithecus_bieti
ENSTNIG00000018898	tdrd1	100	38.614	ENSRROG00000043379	TDRD1	81	46.377	Rhinopithecus_roxellana
ENSTNIG00000018898	tdrd1	100	36.070	ENSSBOG00000023561	TDRD1	80	36.070	Saimiri_boliviensis_boliviensis
ENSTNIG00000018898	tdrd1	100	39.655	ENSSHAG00000014311	TDRD1	82	44.928	Sarcophilus_harrisii
ENSTNIG00000018898	tdrd1	100	38.614	ENSSFOG00015022020	tdrd1	85	38.614	Scleropages_formosus
ENSTNIG00000018898	tdrd1	100	57.614	ENSSMAG00000019271	tdrd1	82	57.614	Scophthalmus_maximus
ENSTNIG00000018898	tdrd1	100	61.675	ENSSDUG00000022012	tdrd1	87	50.615	Seriola_dumerili
ENSTNIG00000018898	tdrd1	100	61.421	ENSSLDG00000006423	tdrd1	87	61.421	Seriola_lalandi_dorsalis
ENSTNIG00000018898	tdrd1	100	40.000	ENSSARG00000008828	TDRD1	67	46.269	Sorex_araneus
ENSTNIG00000018898	tdrd1	100	48.062	ENSSPAG00000018805	tdrd1	85	48.372	Stegastes_partitus
ENSTNIG00000018898	tdrd1	88	46.479	ENSTGUG00000010905	TDRD1	92	46.377	Taeniopygia_guttata
ENSTNIG00000018898	tdrd1	100	70.202	ENSTRUG00000012142	tdrd1	92	70.202	Takifugu_rubripes
ENSTNIG00000018898	tdrd1	82	40.580	ENSTBEG00000014417	-	73	37.500	Tupaia_belangeri
ENSTNIG00000018898	tdrd1	100	33.499	ENSUAMG00000009025	TDRD1	80	33.499	Ursus_americanus
ENSTNIG00000018898	tdrd1	100	34.243	ENSUMAG00000000705	TDRD1	80	33.995	Ursus_maritimus
ENSTNIG00000018898	tdrd1	100	38.028	ENSVVUG00000009750	TDRD1	82	38.028	Vulpes_vulpes
ENSTNIG00000018898	tdrd1	88	44.459	ENSXCOG00000006412	tdrd1	99	44.262	Xiphophorus_couchianus
ENSTNIG00000018898	tdrd1	100	44.900	ENSXMAG00000008104	tdrd1	92	44.789	Xiphophorus_maculatus