EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000018942 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 9506 bases
Position: chr2:7771305-7780810
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000022130	PAM2	PF07145.15	1.4e-05	1	1
ENSTNIP00000022130	LsmAD	PF06741.13	1.2e-18	1	1
ENSTNIP00000022130	SM-ATX	PF14438.6	8.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022367	-	3009	-	ENSTNIP00000022130	1002 (aa)	-	H3DNN1

Gene Model

Click here to download ENSTNIG00000018942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000018942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000018942	-	50	56.121	ENSAPOG00000010103	atxn2l	99	54.693	Acanthochromis_polyacanthus
ENSTNIG00000018942	-	100	81.678	ENSAPOG00000021412	-	98	82.466	Acanthochromis_polyacanthus
ENSTNIG00000018942	-	81	82.020	ENSACIG00000014731	-	97	82.567	Amphilophus_citrinellus
ENSTNIG00000018942	-	84	54.545	ENSACIG00000024435	atxn2l	92	55.348	Amphilophus_citrinellus
ENSTNIG00000018942	-	97	53.529	ENSAOCG00000011378	atxn2l	99	54.889	Amphiprion_ocellaris
ENSTNIG00000018942	-	90	82.139	ENSAOCG00000002581	-	100	82.655	Amphiprion_ocellaris
ENSTNIG00000018942	-	98	53.713	ENSAPEG00000005810	atxn2l	99	55.215	Amphiprion_percula
ENSTNIG00000018942	-	100	83.061	ENSAPEG00000011038	-	100	83.526	Amphiprion_percula
ENSTNIG00000018942	-	78	50.356	ENSATEG00000017689	atxn2l	98	51.082	Anabas_testudineus
ENSTNIG00000018942	-	100	80.929	ENSATEG00000019382	-	98	82.381	Anabas_testudineus
ENSTNIG00000018942	-	83	54.348	ENSACLG00000016900	atxn2l	94	50.359	Astatotilapia_calliptera
ENSTNIG00000018942	-	100	79.961	ENSACLG00000009975	-	98	80.829	Astatotilapia_calliptera
ENSTNIG00000018942	-	99	62.199	ENSAMXG00000020362	-	97	62.207	Astyanax_mexicanus
ENSTNIG00000018942	-	96	52.503	ENSAMXG00000003332	atxn2l	95	53.693	Astyanax_mexicanus
ENSTNIG00000018942	-	97	41.728	ENSTSYG00000013854	ATXN2L	92	63.566	Carlito_syrichta
ENSTNIG00000018942	-	96	43.186	ENSCPOG00000010521	ATXN2L	95	63.566	Cavia_porcellus
ENSTNIG00000018942	-	87	46.429	ENSCATG00000021354	ATXN2L	89	63.953	Cercocebus_atys
ENSTNIG00000018942	-	96	42.843	ENSCLAG00000016117	ATXN2L	95	63.566	Chinchilla_lanigera
ENSTNIG00000018942	-	96	41.954	ENSCGRG00001017114	Atxn2l	85	64.444	Cricetulus_griseus_chok1gshd
ENSTNIG00000018942	-	94	41.487	ENSCGRG00000001500	Atxn2l	91	63.178	Cricetulus_griseus_crigri
ENSTNIG00000018942	-	60	77.558	ENSCSEG00000008530	-	96	79.373	Cynoglossus_semilaevis
ENSTNIG00000018942	-	100	77.519	ENSCVAG00000015825	-	100	77.522	Cyprinodon_variegatus
ENSTNIG00000018942	-	100	56.538	ENSDARG00000011597	atxn2l	98	56.220	Danio_rerio
ENSTNIG00000018942	-	97	42.179	ENSEASG00005014992	ATXN2L	89	63.566	Equus_asinus_asinus
ENSTNIG00000018942	-	99	58.108	ENSELUG00000023740	atxn2l	99	57.582	Esox_lucius
ENSTNIG00000018942	-	87	67.182	ENSELUG00000022915	-	89	65.594	Esox_lucius
ENSTNIG00000018942	-	66	71.554	ENSFHEG00000004491	-	85	69.883	Fundulus_heteroclitus
ENSTNIG00000018942	-	100	66.995	ENSGMOG00000006016	-	100	67.783	Gadus_morhua
ENSTNIG00000018942	-	56	67.544	ENSGMOG00000000316	atxn2l	78	65.854	Gadus_morhua
ENSTNIG00000018942	-	70	75.720	ENSGAFG00000019364	-	99	76.132	Gambusia_affinis
ENSTNIG00000018942	-	100	78.642	ENSGACG00000007446	-	100	78.578	Gasterosteus_aculeatus
ENSTNIG00000018942	-	97	42.300	ENSGAGG00000006078	ATXN2L	57	63.060	Gopherus_agassizii
ENSTNIG00000018942	-	85	50.943	ENSGGOG00000036669	-	53	54.074	Gorilla_gorilla
ENSTNIG00000018942	-	51	54.857	ENSHBUG00000013425	atxn2l	99	52.065	Haplochromis_burtoni
ENSTNIG00000018942	-	100	79.769	ENSHBUG00000007997	-	100	80.636	Haplochromis_burtoni
ENSTNIG00000018942	-	97	40.797	ENSHGLG00100000705	ATXN2L	84	64.815	Heterocephalus_glaber_male
ENSTNIG00000018942	-	100	59.375	ENSIPUG00000001761	atxn2l	97	58.325	Ictalurus_punctatus
ENSTNIG00000018942	-	74	39.238	ENSSTOG00000011807	ATXN2L	92	63.529	Ictidomys_tridecemlineatus
ENSTNIG00000018942	-	86	45.221	ENSJJAG00000005629	Atxn2l	93	63.566	Jaculus_jaculus
ENSTNIG00000018942	-	100	79.709	ENSKMAG00000021450	-	100	79.922	Kryptolebias_marmoratus
ENSTNIG00000018942	-	100	80.039	ENSLBEG00000022720	-	98	81.207	Labrus_bergylta
ENSTNIG00000018942	-	64	65.543	ENSLAFG00000018143	ATXN2L	75	63.953	Loxodonta_africana
ENSTNIG00000018942	-	99	53.352	ENSMAMG00000017977	atxn2l	99	53.839	Mastacembelus_armatus
ENSTNIG00000018942	-	100	79.864	ENSMAMG00000013005	-	98	80.445	Mastacembelus_armatus
ENSTNIG00000018942	-	100	79.961	ENSMZEG00005013869	-	98	80.829	Maylandia_zebra
ENSTNIG00000018942	-	87	45.539	ENSMICG00000010608	ATXN2L	92	63.566	Microcebus_murinus
ENSTNIG00000018942	-	97	42.257	ENSMOCG00000020882	Atxn2l	91	63.566	Microtus_ochrogaster
ENSTNIG00000018942	-	85	82.564	ENSMALG00000008430	-	93	82.564	Monopterus_albus
ENSTNIG00000018942	-	97	42.495	MGP_CAROLIEiJ_G0030450	Atxn2l	91	63.566	Mus_caroli
ENSTNIG00000018942	-	97	42.655	ENSMUSG00000032637	Atxn2l	91	63.566	Mus_musculus
ENSTNIG00000018942	-	96	42.352	MGP_PahariEiJ_G0013660	Atxn2l	91	63.566	Mus_pahari
ENSTNIG00000018942	-	97	42.750	MGP_SPRETEiJ_G0031564	Atxn2l	91	63.566	Mus_spretus
ENSTNIG00000018942	-	96	42.912	ENSMLUG00000009877	ATXN2L	77	65.185	Myotis_lucifugus
ENSTNIG00000018942	-	86	45.336	ENSNGAG00000021446	Atxn2l	91	63.953	Nannospalax_galili
ENSTNIG00000018942	-	90	48.450	ENSNLEG00000033414	-	88	48.062	Nomascus_leucogenys
ENSTNIG00000018942	-	81	58.544	ENSMEUG00000011098	ATXN2L	59	62.921	Notamacropus_eugenii
ENSTNIG00000018942	-	100	80.443	ENSONIG00000011478	-	100	80.732	Oreochromis_niloticus
ENSTNIG00000018942	-	51	54.461	ENSONIG00000009388	atxn2l	99	51.205	Oreochromis_niloticus
ENSTNIG00000018942	-	100	76.522	ENSORLG00000006059	-	98	76.812	Oryzias_latipes
ENSTNIG00000018942	-	100	76.232	ENSORLG00020000991	-	98	76.522	Oryzias_latipes_hni
ENSTNIG00000018942	-	100	76.232	ENSORLG00015014174	-	98	76.329	Oryzias_latipes_hsok
ENSTNIG00000018942	-	100	76.323	ENSOMEG00000021118	-	98	76.227	Oryzias_melastigma
ENSTNIG00000018942	-	85	55.431	ENSPPAG00000036236	-	94	52.549	Pan_paniscus
ENSTNIG00000018942	-	74	75.683	ENSPMGG00000014821	-	97	74.036	Periophthalmus_magnuspinnatus
ENSTNIG00000018942	-	97	42.071	ENSPEMG00000019231	Atxn2l	85	64.815	Peromyscus_maniculatus_bairdii
ENSTNIG00000018942	-	100	77.304	ENSPFOG00000005935	-	100	77.692	Poecilia_formosa
ENSTNIG00000018942	-	100	77.304	ENSPLAG00000017094	-	100	77.692	Poecilia_latipinna
ENSTNIG00000018942	-	100	77.401	ENSPMEG00000017227	-	100	77.789	Poecilia_mexicana
ENSTNIG00000018942	-	100	77.498	ENSPREG00000023090	-	100	77.886	Poecilia_reticulata
ENSTNIG00000018942	-	86	45.936	ENSPCOG00000024791	ATXN2L	78	64.815	Propithecus_coquereli
ENSTNIG00000018942	-	100	79.961	ENSPNYG00000017058	-	98	80.829	Pundamilia_nyererei
ENSTNIG00000018942	-	99	61.665	ENSPNAG00000023685	-	98	61.733	Pygocentrus_nattereri
ENSTNIG00000018942	-	100	59.270	ENSPNAG00000014538	atxn2l	99	60.780	Pygocentrus_nattereri
ENSTNIG00000018942	-	60	67.355	ENSRBIG00000036712	ATXN2L	75	68.220	Rhinopithecus_bieti
ENSTNIG00000018942	-	100	56.951	ENSSFOG00015001018	atxn2l	99	56.693	Scleropages_formosus
ENSTNIG00000018942	-	100	82.160	ENSSMAG00000016932	-	98	82.546	Scophthalmus_maximus
ENSTNIG00000018942	-	100	83.124	ENSSDUG00000023014	-	100	84.571	Seriola_dumerili
ENSTNIG00000018942	-	87	91.698	ENSSLDG00000017701	-	98	91.698	Seriola_lalandi_dorsalis
ENSTNIG00000018942	-	100	81.172	ENSSPAG00000008174	-	98	81.844	Stegastes_partitus
ENSTNIG00000018942	-	99	89.381	ENSTRUG00000007132	-	98	91.245	Takifugu_rubripes
ENSTNIG00000018942	-	96	41.920	ENSUMAG00000009437	ATXN2L	93	64.815	Ursus_maritimus
ENSTNIG00000018942	-	96	42.815	ENSVVUG00000024239	ATXN2L	92	63.566	Vulpes_vulpes
ENSTNIG00000018942	-	100	77.273	ENSXMAG00000010133	-	100	77.660	Xiphophorus_maculatus