EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000019000 (Gene tree)
Gene ID: -
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2380 bases
Position: chr16:6292986-6295365
Accession: ZDB-GENE-040426-1116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000022190	SBDS	PF01172.18	1.4e-33	1	1
ENSTNIP00000022190	SBDS_C	PF09377.10	1.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022428	-	1495	-	ENSTNIP00000022190	249 (aa)	-	Q4RFU2

Gene Model

Click here to download ENSTNIG00000019000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000019000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000019000	sbds	100	81.928	ENSG00000126524	SBDS	97	86.747	Homo_sapiens
ENSTNIG00000019000	sbds	100	96.787	ENSAPOG00000014285	sbds	100	96.787	Acanthochromis_polyacanthus
ENSTNIG00000019000	sbds	100	81.928	ENSAMEG00000018167	SBDS	99	81.928	Ailuropoda_melanoleuca
ENSTNIG00000019000	sbds	100	95.635	ENSACIG00000007308	sbds	100	95.635	Amphilophus_citrinellus
ENSTNIG00000019000	sbds	100	95.984	ENSAOCG00000016770	sbds	100	95.984	Amphiprion_ocellaris
ENSTNIG00000019000	sbds	100	96.386	ENSAPEG00000015897	sbds	100	96.386	Amphiprion_percula
ENSTNIG00000019000	sbds	100	95.582	ENSATEG00000006901	sbds	100	95.582	Anabas_testudineus
ENSTNIG00000019000	sbds	83	80.583	ENSANAG00000037501	-	99	80.583	Aotus_nancymaae
ENSTNIG00000019000	sbds	93	76.190	ENSANAG00000024342	-	97	76.190	Aotus_nancymaae
ENSTNIG00000019000	sbds	100	96.787	ENSACLG00000018750	sbds	100	96.787	Astatotilapia_calliptera
ENSTNIG00000019000	sbds	100	89.960	ENSAMXG00000005361	sbds	99	89.960	Astyanax_mexicanus
ENSTNIG00000019000	sbds	100	81.928	ENSBTAG00000004051	SBDS	99	81.928	Bos_taurus
ENSTNIG00000019000	sbds	98	56.911	WBGene00021063	sbds-1	97	56.911	Caenorhabditis_elegans
ENSTNIG00000019000	sbds	100	81.928	ENSCJAG00000041007	SBDS	99	81.928	Callithrix_jacchus
ENSTNIG00000019000	sbds	100	80.080	ENSCAFG00000010797	SBDS	99	80.080	Canis_familiaris
ENSTNIG00000019000	sbds	100	81.928	ENSCAFG00020005357	SBDS	99	81.928	Canis_lupus_dingo
ENSTNIG00000019000	sbds	100	81.928	ENSCHIG00000026854	SBDS	99	81.928	Capra_hircus
ENSTNIG00000019000	sbds	100	81.928	ENSTSYG00000033822	SBDS	99	81.928	Carlito_syrichta
ENSTNIG00000019000	sbds	65	80.368	ENSCAPG00000006634	SBDS	99	80.368	Cavia_aperea
ENSTNIG00000019000	sbds	100	82.731	ENSCPOG00000036143	SBDS	99	82.731	Cavia_porcellus
ENSTNIG00000019000	sbds	100	81.928	ENSCCAG00000020671	SBDS	99	81.928	Cebus_capucinus
ENSTNIG00000019000	sbds	100	81.928	ENSCATG00000039026	SBDS	99	81.928	Cercocebus_atys
ENSTNIG00000019000	sbds	99	58.065	ENSCLAG00000002113	-	99	58.065	Chinchilla_lanigera
ENSTNIG00000019000	sbds	100	83.133	ENSCLAG00000005721	-	99	83.133	Chinchilla_lanigera
ENSTNIG00000019000	sbds	100	81.928	ENSCSAG00000018275	SBDS	99	81.928	Chlorocebus_sabaeus
ENSTNIG00000019000	sbds	100	77.510	ENSCHOG00000003795	SBDS	99	77.510	Choloepus_hoffmanni
ENSTNIG00000019000	sbds	100	84.739	ENSCPBG00000014893	SBDS	99	84.739	Chrysemys_picta_bellii
ENSTNIG00000019000	sbds	99	66.532	ENSCSAVG00000011811	-	99	66.532	Ciona_savignyi
ENSTNIG00000019000	sbds	100	81.526	ENSCANG00000032368	SBDS	99	81.526	Colobus_angolensis_palliatus
ENSTNIG00000019000	sbds	65	80.368	ENSCGRG00001019886	Sbds	99	80.368	Cricetulus_griseus_chok1gshd
ENSTNIG00000019000	sbds	83	81.553	ENSCGRG00000009211	Sbds	99	81.553	Cricetulus_griseus_crigri
ENSTNIG00000019000	sbds	100	93.173	ENSCSEG00000005798	sbds	100	93.173	Cynoglossus_semilaevis
ENSTNIG00000019000	sbds	100	92.771	ENSCVAG00000001053	sbds	100	92.771	Cyprinodon_variegatus
ENSTNIG00000019000	sbds	100	87.149	ENSDARG00000027803	sbds	99	87.149	Danio_rerio
ENSTNIG00000019000	sbds	100	81.928	ENSDNOG00000041174	SBDS	99	81.928	Dasypus_novemcinctus
ENSTNIG00000019000	sbds	100	83.936	ENSDORG00000026218	Sbds	99	83.936	Dipodomys_ordii
ENSTNIG00000019000	sbds	91	60.965	FBgn0035714	CG8549	98	60.324	Drosophila_melanogaster
ENSTNIG00000019000	sbds	93	58.621	ENSEBUG00000015780	sbds	99	58.621	Eptatretus_burgeri
ENSTNIG00000019000	sbds	100	81.928	ENSEASG00005008821	SBDS	99	81.928	Equus_asinus_asinus
ENSTNIG00000019000	sbds	100	81.928	ENSECAG00000008202	SBDS	99	81.928	Equus_caballus
ENSTNIG00000019000	sbds	84	62.981	ENSEEUG00000004768	SBDS	100	62.981	Erinaceus_europaeus
ENSTNIG00000019000	sbds	100	89.157	ENSELUG00000008382	sbds	99	89.157	Esox_lucius
ENSTNIG00000019000	sbds	100	81.928	ENSFCAG00000022142	SBDS	99	81.928	Felis_catus
ENSTNIG00000019000	sbds	100	85.944	ENSFALG00000013808	SBDS	99	85.944	Ficedula_albicollis
ENSTNIG00000019000	sbds	100	82.731	ENSFDAG00000018947	-	99	82.731	Fukomys_damarensis
ENSTNIG00000019000	sbds	100	89.960	ENSFHEG00000000708	sbds	100	89.960	Fundulus_heteroclitus
ENSTNIG00000019000	sbds	100	90.763	ENSGMOG00000018356	sbds	99	90.763	Gadus_morhua
ENSTNIG00000019000	sbds	100	83.133	ENSGALG00000027989	SBDS	99	83.133	Gallus_gallus
ENSTNIG00000019000	sbds	92	89.130	ENSGAFG00000014204	sbds	100	89.130	Gambusia_affinis
ENSTNIG00000019000	sbds	100	91.968	ENSGACG00000012697	sbds	100	91.968	Gasterosteus_aculeatus
ENSTNIG00000019000	sbds	86	84.977	ENSGAGG00000022402	SBDS	99	84.977	Gopherus_agassizii
ENSTNIG00000019000	sbds	96	63.750	ENSGGOG00000040023	-	92	63.750	Gorilla_gorilla
ENSTNIG00000019000	sbds	100	96.787	ENSHBUG00000002660	sbds	100	96.787	Haplochromis_burtoni
ENSTNIG00000019000	sbds	100	81.526	ENSHGLG00000009671	SBDS	99	81.526	Heterocephalus_glaber_female
ENSTNIG00000019000	sbds	100	81.526	ENSHGLG00100011332	SBDS	99	81.526	Heterocephalus_glaber_male
ENSTNIG00000019000	sbds	100	89.960	ENSHCOG00000018606	sbds	100	89.960	Hippocampus_comes
ENSTNIG00000019000	sbds	100	88.353	ENSIPUG00000006536	sbds	99	88.353	Ictalurus_punctatus
ENSTNIG00000019000	sbds	100	58.730	ENSJJAG00000003934	-	99	60.000	Jaculus_jaculus
ENSTNIG00000019000	sbds	99	80.162	ENSJJAG00000012033	-	99	80.162	Jaculus_jaculus
ENSTNIG00000019000	sbds	100	93.976	ENSKMAG00000018542	sbds	100	93.976	Kryptolebias_marmoratus
ENSTNIG00000019000	sbds	100	91.165	ENSLBEG00000016687	sbds	100	91.165	Labrus_bergylta
ENSTNIG00000019000	sbds	100	73.518	ENSLACG00000018916	SBDS	99	73.518	Latimeria_chalumnae
ENSTNIG00000019000	sbds	100	88.353	ENSLOCG00000004073	sbds	99	88.353	Lepisosteus_oculatus
ENSTNIG00000019000	sbds	100	82.329	ENSLAFG00000008763	SBDS	99	82.329	Loxodonta_africana
ENSTNIG00000019000	sbds	100	81.928	ENSMFAG00000032620	SBDS	99	81.928	Macaca_fascicularis
ENSTNIG00000019000	sbds	100	81.928	ENSMMUG00000045653	SBDS	99	81.928	Macaca_mulatta
ENSTNIG00000019000	sbds	100	81.928	ENSMNEG00000031523	SBDS	99	81.928	Macaca_nemestrina
ENSTNIG00000019000	sbds	100	66.008	ENSMLEG00000036826	SBDS	99	66.008	Mandrillus_leucophaeus
ENSTNIG00000019000	sbds	100	95.984	ENSMAMG00000016062	sbds	100	95.984	Mastacembelus_armatus
ENSTNIG00000019000	sbds	100	96.787	ENSMZEG00005024385	sbds	100	96.787	Maylandia_zebra
ENSTNIG00000019000	sbds	100	83.133	ENSMGAG00000002119	SBDS	99	83.133	Meleagris_gallopavo
ENSTNIG00000019000	sbds	100	67.871	ENSMAUG00000022214	-	100	67.871	Mesocricetus_auratus
ENSTNIG00000019000	sbds	100	81.928	ENSMICG00000014366	SBDS	99	81.928	Microcebus_murinus
ENSTNIG00000019000	sbds	100	82.329	ENSMOCG00000011739	Sbds	99	82.329	Microtus_ochrogaster
ENSTNIG00000019000	sbds	100	83.600	ENSMMOG00000005061	sbds	100	83.600	Mola_mola
ENSTNIG00000019000	sbds	100	83.133	ENSMODG00000006644	SBDS	99	83.133	Monodelphis_domestica
ENSTNIG00000019000	sbds	100	91.968	ENSMALG00000010219	sbds	100	91.968	Monopterus_albus
ENSTNIG00000019000	sbds	100	83.133	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSTNIG00000019000	sbds	100	83.534	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSTNIG00000019000	sbds	100	83.133	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSTNIG00000019000	sbds	100	83.534	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSTNIG00000019000	sbds	67	83.234	ENSMPUG00000016192	SBDS	96	83.234	Mustela_putorius_furo
ENSTNIG00000019000	sbds	73	77.348	ENSMLUG00000013575	SBDS	99	77.348	Myotis_lucifugus
ENSTNIG00000019000	sbds	100	83.133	ENSNGAG00000012093	Sbds	99	83.133	Nannospalax_galili
ENSTNIG00000019000	sbds	100	96.787	ENSNBRG00000017027	sbds	100	96.787	Neolamprologus_brichardi
ENSTNIG00000019000	sbds	100	81.928	ENSNLEG00000013288	SBDS	99	81.928	Nomascus_leucogenys
ENSTNIG00000019000	sbds	100	83.133	ENSOPRG00000008721	SBDS	99	83.133	Ochotona_princeps
ENSTNIG00000019000	sbds	100	65.863	ENSODEG00000001116	-	99	65.863	Octodon_degus
ENSTNIG00000019000	sbds	100	63.052	ENSODEG00000000137	-	84	65.462	Octodon_degus
ENSTNIG00000019000	sbds	100	74.699	ENSODEG00000019253	-	84	74.699	Octodon_degus
ENSTNIG00000019000	sbds	100	95.984	ENSONIG00000005874	sbds	100	95.984	Oreochromis_niloticus
ENSTNIG00000019000	sbds	82	81.863	ENSOANG00000007674	-	99	81.863	Ornithorhynchus_anatinus
ENSTNIG00000019000	sbds	100	83.936	ENSOCUG00000003170	SBDS	99	83.936	Oryctolagus_cuniculus
ENSTNIG00000019000	sbds	100	90.763	ENSORLG00000023489	sbds	100	90.763	Oryzias_latipes
ENSTNIG00000019000	sbds	100	90.361	ENSORLG00020019282	sbds	100	90.361	Oryzias_latipes_hni
ENSTNIG00000019000	sbds	100	90.361	ENSORLG00015008005	sbds	100	90.361	Oryzias_latipes_hsok
ENSTNIG00000019000	sbds	100	91.566	ENSOMEG00000022747	sbds	100	91.566	Oryzias_melastigma
ENSTNIG00000019000	sbds	100	69.880	ENSOGAG00000015036	-	99	69.880	Otolemur_garnettii
ENSTNIG00000019000	sbds	100	82.329	ENSOGAG00000009011	-	99	82.329	Otolemur_garnettii
ENSTNIG00000019000	sbds	100	81.928	ENSOARG00000010609	SBDS	99	81.928	Ovis_aries
ENSTNIG00000019000	sbds	100	81.124	ENSPPAG00000043889	-	99	81.124	Pan_paniscus
ENSTNIG00000019000	sbds	100	81.928	ENSPPRG00000002307	SBDS	99	81.928	Panthera_pardus
ENSTNIG00000019000	sbds	100	81.928	ENSPTIG00000021308	SBDS	99	81.928	Panthera_tigris_altaica
ENSTNIG00000019000	sbds	100	68.273	ENSPTRG00000050835	-	99	68.273	Pan_troglodytes
ENSTNIG00000019000	sbds	87	79.724	ENSPTRG00000048174	-	96	79.724	Pan_troglodytes
ENSTNIG00000019000	sbds	100	81.928	ENSPTRG00000019254	SBDS	99	81.928	Pan_troglodytes
ENSTNIG00000019000	sbds	100	68.273	ENSPTRG00000047744	-	99	68.273	Pan_troglodytes
ENSTNIG00000019000	sbds	100	81.928	ENSPANG00000004078	SBDS	99	81.928	Papio_anubis
ENSTNIG00000019000	sbds	100	90.763	ENSPKIG00000006489	sbds	99	90.763	Paramormyrops_kingsleyae
ENSTNIG00000019000	sbds	83	82.609	ENSPSIG00000014603	SBDS	99	82.609	Pelodiscus_sinensis
ENSTNIG00000019000	sbds	100	95.582	ENSPMGG00000004246	sbds	100	95.582	Periophthalmus_magnuspinnatus
ENSTNIG00000019000	sbds	100	83.133	ENSPEMG00000008728	Sbds	99	83.133	Peromyscus_maniculatus_bairdii
ENSTNIG00000019000	sbds	100	83.936	ENSPCIG00000029718	SBDS	99	83.936	Phascolarctos_cinereus
ENSTNIG00000019000	sbds	100	91.566	ENSPFOG00000015837	sbds	100	91.566	Poecilia_formosa
ENSTNIG00000019000	sbds	100	91.968	ENSPLAG00000003641	sbds	100	91.968	Poecilia_latipinna
ENSTNIG00000019000	sbds	100	91.566	ENSPMEG00000019483	sbds	100	91.566	Poecilia_mexicana
ENSTNIG00000019000	sbds	100	91.566	ENSPREG00000018758	sbds	100	91.566	Poecilia_reticulata
ENSTNIG00000019000	sbds	100	81.928	ENSPPYG00000017513	SBDS	99	81.928	Pongo_abelii
ENSTNIG00000019000	sbds	100	81.526	ENSPCOG00000021098	SBDS	99	81.526	Propithecus_coquereli
ENSTNIG00000019000	sbds	100	82.329	ENSPVAG00000009369	SBDS	99	82.329	Pteropus_vampyrus
ENSTNIG00000019000	sbds	100	96.386	ENSPNYG00000022403	sbds	100	96.386	Pundamilia_nyererei
ENSTNIG00000019000	sbds	100	92.771	ENSPNAG00000001120	sbds	99	92.771	Pygocentrus_nattereri
ENSTNIG00000019000	sbds	100	83.133	ENSRNOG00000000888	Sbds	99	83.133	Rattus_norvegicus
ENSTNIG00000019000	sbds	100	81.928	ENSRBIG00000035557	SBDS	99	81.928	Rhinopithecus_bieti
ENSTNIG00000019000	sbds	100	67.871	ENSRROG00000041986	-	99	67.871	Rhinopithecus_roxellana
ENSTNIG00000019000	sbds	100	81.928	ENSRROG00000040842	-	99	81.928	Rhinopithecus_roxellana
ENSTNIG00000019000	sbds	92	42.616	YLR022C	-	94	42.616	Saccharomyces_cerevisiae
ENSTNIG00000019000	sbds	93	80.087	ENSSBOG00000022460	SBDS	99	80.087	Saimiri_boliviensis_boliviensis
ENSTNIG00000019000	sbds	100	72.289	ENSSHAG00000010263	SBDS	99	72.289	Sarcophilus_harrisii
ENSTNIG00000019000	sbds	100	91.566	ENSSFOG00015001108	sbds	99	91.566	Scleropages_formosus
ENSTNIG00000019000	sbds	100	93.574	ENSSMAG00000020506	sbds	100	93.574	Scophthalmus_maximus
ENSTNIG00000019000	sbds	100	95.181	ENSSDUG00000001528	sbds	100	95.181	Seriola_dumerili
ENSTNIG00000019000	sbds	100	94.779	ENSSLDG00000003659	sbds	100	94.779	Seriola_lalandi_dorsalis
ENSTNIG00000019000	sbds	61	87.582	ENSSARG00000013132	-	100	87.582	Sorex_araneus
ENSTNIG00000019000	sbds	73	88.372	ENSSARG00000001899	-	73	88.372	Sorex_araneus
ENSTNIG00000019000	sbds	100	83.534	ENSSPUG00000002699	SBDS	99	83.534	Sphenodon_punctatus
ENSTNIG00000019000	sbds	100	96.386	ENSSPAG00000016419	sbds	100	88.800	Stegastes_partitus
ENSTNIG00000019000	sbds	100	81.928	ENSSSCG00000007732	SBDS	99	81.928	Sus_scrofa
ENSTNIG00000019000	sbds	66	85.976	ENSTGUG00000003426	SBDS	99	85.976	Taeniopygia_guttata
ENSTNIG00000019000	sbds	100	97.189	ENSTRUG00000021443	sbds	100	97.189	Takifugu_rubripes
ENSTNIG00000019000	sbds	84	69.712	ENSTBEG00000001178	SBDS	100	69.712	Tupaia_belangeri
ENSTNIG00000019000	sbds	100	64.257	ENSTTRG00000003921	SBDS	99	64.257	Tursiops_truncatus
ENSTNIG00000019000	sbds	100	81.928	ENSUAMG00000001326	SBDS	99	81.928	Ursus_americanus
ENSTNIG00000019000	sbds	100	81.928	ENSUMAG00000015353	SBDS	99	81.928	Ursus_maritimus
ENSTNIG00000019000	sbds	100	81.928	ENSVVUG00000016478	SBDS	99	81.928	Vulpes_vulpes
ENSTNIG00000019000	sbds	100	85.542	ENSXETG00000010093	sbds	99	85.542	Xenopus_tropicalis
ENSTNIG00000019000	sbds	100	81.928	ENSXCOG00000010639	sbds	100	81.928	Xiphophorus_couchianus
ENSTNIG00000019000	sbds	100	91.968	ENSXMAG00000006065	sbds	100	91.968	Xiphophorus_maculatus