EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000019239 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162879
Alias: -
Full Name: zgc:162879
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5922 bases
Position: chr13:2835244-2841165
Accession: ZDB-GENE-070424-92
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000022439	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022678	-	2133	-	ENSTNIP00000022439	710 (aa)	-	H3DPJ0

Gene Model

Click here to download ENSTNIG00000019239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000019239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000019239	zgc:162879	98	34.875	ENSTNIG00000006010	rasef	98	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000019239	zgc:162879	99	70.413	ENSAPOG00000008539	zgc:162879	99	70.413	Acanthochromis_polyacanthus
ENSTNIG00000019239	zgc:162879	99	70.922	ENSACIG00000023717	zgc:162879	99	70.922	Amphilophus_citrinellus
ENSTNIG00000019239	zgc:162879	80	72.251	ENSAOCG00000006210	zgc:162879	87	72.251	Amphiprion_ocellaris
ENSTNIG00000019239	zgc:162879	99	70.555	ENSAPEG00000017489	zgc:162879	99	70.555	Amphiprion_percula
ENSTNIG00000019239	zgc:162879	99	73.617	ENSATEG00000006102	zgc:162879	99	73.617	Anabas_testudineus
ENSTNIG00000019239	zgc:162879	99	69.176	ENSACLG00000021066	zgc:162879	99	68.511	Astatotilapia_calliptera
ENSTNIG00000019239	zgc:162879	98	57.571	ENSAMXG00000007430	zgc:162879	99	57.571	Astyanax_mexicanus
ENSTNIG00000019239	zgc:162879	72	70.199	ENSCSEG00000013699	zgc:162879	91	58.852	Cynoglossus_semilaevis
ENSTNIG00000019239	zgc:162879	99	63.766	ENSCVAG00000014510	zgc:162879	99	63.766	Cyprinodon_variegatus
ENSTNIG00000019239	zgc:162879	98	55.350	ENSDARG00000074163	zgc:162879	99	55.350	Danio_rerio
ENSTNIG00000019239	zgc:162879	99	50.638	ENSELUG00000019483	zgc:162879	98	58.398	Esox_lucius
ENSTNIG00000019239	zgc:162879	72	66.016	ENSFHEG00000022549	zgc:162879	99	66.016	Fundulus_heteroclitus
ENSTNIG00000019239	zgc:162879	99	63.494	ENSGAFG00000001313	zgc:162879	99	63.494	Gambusia_affinis
ENSTNIG00000019239	zgc:162879	99	68.276	ENSGACG00000010798	zgc:162879	99	68.000	Gasterosteus_aculeatus
ENSTNIG00000019239	zgc:162879	99	69.078	ENSHBUG00000016335	zgc:162879	99	69.078	Haplochromis_burtoni
ENSTNIG00000019239	zgc:162879	88	66.667	ENSHCOG00000012026	zgc:162879	95	66.667	Hippocampus_comes
ENSTNIG00000019239	zgc:162879	99	62.020	ENSKMAG00000016246	zgc:162879	99	61.309	Kryptolebias_marmoratus
ENSTNIG00000019239	zgc:162879	99	67.949	ENSLBEG00000006690	zgc:162879	99	67.949	Labrus_bergylta
ENSTNIG00000019239	zgc:162879	99	43.320	ENSLACG00000014082	-	99	43.061	Latimeria_chalumnae
ENSTNIG00000019239	zgc:162879	99	56.479	ENSLOCG00000014347	zgc:162879	98	56.479	Lepisosteus_oculatus
ENSTNIG00000019239	zgc:162879	99	68.892	ENSMAMG00000008875	zgc:162879	99	68.892	Mastacembelus_armatus
ENSTNIG00000019239	zgc:162879	99	69.034	ENSMZEG00005022256	zgc:162879	99	69.034	Maylandia_zebra
ENSTNIG00000019239	zgc:162879	99	61.986	ENSNBRG00000020110	zgc:162879	99	61.986	Neolamprologus_brichardi
ENSTNIG00000019239	zgc:162879	99	68.961	ENSONIG00000015165	zgc:162879	100	68.961	Oreochromis_niloticus
ENSTNIG00000019239	zgc:162879	99	60.628	ENSORLG00015017960	zgc:162879	99	60.628	Oryzias_latipes_hsok
ENSTNIG00000019239	zgc:162879	88	64.336	ENSPKIG00000020661	zgc:162879	99	52.192	Paramormyrops_kingsleyae
ENSTNIG00000019239	zgc:162879	99	63.053	ENSPFOG00000006354	zgc:162879	98	63.053	Poecilia_formosa
ENSTNIG00000019239	zgc:162879	99	63.195	ENSPLAG00000020643	zgc:162879	98	63.195	Poecilia_latipinna
ENSTNIG00000019239	zgc:162879	99	62.571	ENSPMEG00000014713	zgc:162879	99	62.571	Poecilia_mexicana
ENSTNIG00000019239	zgc:162879	99	62.553	ENSPNYG00000010530	zgc:162879	99	62.553	Pundamilia_nyererei
ENSTNIG00000019239	zgc:162879	99	56.534	ENSPNAG00000012022	zgc:162879	99	56.534	Pygocentrus_nattereri
ENSTNIG00000019239	zgc:162879	72	52.039	ENSSFOG00015023774	zgc:162879	79	51.845	Scleropages_formosus
ENSTNIG00000019239	zgc:162879	99	69.252	ENSSMAG00000001513	zgc:162879	100	69.307	Scophthalmus_maximus
ENSTNIG00000019239	zgc:162879	99	73.722	ENSSDUG00000011478	zgc:162879	99	73.722	Seriola_dumerili
ENSTNIG00000019239	zgc:162879	99	73.295	ENSSLDG00000000877	zgc:162879	99	73.295	Seriola_lalandi_dorsalis
ENSTNIG00000019239	zgc:162879	99	64.387	ENSSPAG00000010598	zgc:162879	99	64.387	Stegastes_partitus
ENSTNIG00000019239	zgc:162879	99	42.877	ENSXETG00000015491	rasef	98	42.192	Xenopus_tropicalis
ENSTNIG00000019239	zgc:162879	73	62.741	ENSXCOG00000020244	zgc:162879	100	62.741	Xiphophorus_couchianus
ENSTNIG00000019239	zgc:162879	99	63.778	ENSXMAG00000002846	zgc:162879	99	68.015	Xiphophorus_maculatus