EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000019246 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 6329 bases
Position: chr13:2716069-2722397
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000022447	HRDC	PF00570.23	6.8e-15	1	1
ENSTNIP00000022447	BDHCT	PF08072.11	2.1e-19	1	1
ENSTNIP00000022447	DEAD	PF00270.29	4.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022686	-	4014	-	ENSTNIP00000022447	1338 (aa)	-	H3DPJ8

Gene Model

Click here to download ENSTNIG00000019246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000019246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000019246	blm	99	66.434	ENSAPOG00000017966	blm	99	66.035	Acanthochromis_polyacanthus
ENSTNIG00000019246	blm	67	64.578	ENSAMEG00000013843	BLM	75	64.578	Ailuropoda_melanoleuca
ENSTNIG00000019246	blm	99	66.926	ENSACIG00000023762	blm	99	66.926	Amphilophus_citrinellus
ENSTNIG00000019246	blm	99	65.588	ENSAOCG00000003318	blm	99	66.151	Amphiprion_ocellaris
ENSTNIG00000019246	blm	99	66.013	ENSAPEG00000018105	blm	99	65.943	Amphiprion_percula
ENSTNIG00000019246	blm	99	67.416	ENSATEG00000006421	blm	99	67.486	Anabas_testudineus
ENSTNIG00000019246	blm	81	51.494	ENSAPLG00000006878	BLM	82	60.599	Anas_platyrhynchos
ENSTNIG00000019246	blm	76	55.566	ENSACAG00000014275	BLM	55	65.854	Anolis_carolinensis
ENSTNIG00000019246	blm	81	53.745	ENSANAG00000038415	BLM	84	51.562	Aotus_nancymaae
ENSTNIG00000019246	blm	99	67.328	ENSACLG00000020354	blm	99	67.753	Astatotilapia_calliptera
ENSTNIG00000019246	blm	100	53.488	ENSAMXG00000016970	blm	99	55.000	Astyanax_mexicanus
ENSTNIG00000019246	blm	53	78.591	ENSBTAG00000020301	BLM	72	78.591	Bos_taurus
ENSTNIG00000019246	blm	58	37.998	WBGene00001865	him-6	82	37.873	Caenorhabditis_elegans
ENSTNIG00000019246	blm	63	64.631	ENSCJAG00000009803	BLM	84	51.832	Callithrix_jacchus
ENSTNIG00000019246	blm	63	63.683	ENSCAFG00000012385	BLM	84	64.322	Canis_familiaris
ENSTNIG00000019246	blm	62	72.541	ENSCAFG00020016111	BLM	83	72.541	Canis_lupus_dingo
ENSTNIG00000019246	blm	53	78.591	ENSCHIG00000010329	BLM	72	78.591	Capra_hircus
ENSTNIG00000019246	blm	89	51.715	ENSTSYG00000012368	BLM	92	51.715	Carlito_syrichta
ENSTNIG00000019246	blm	54	68.651	ENSCAPG00000017976	BLM	69	68.651	Cavia_aperea
ENSTNIG00000019246	blm	63	64.204	ENSCCAG00000023069	BLM	84	51.842	Cebus_capucinus
ENSTNIG00000019246	blm	70	64.586	ENSCATG00000040609	BLM	75	75.082	Cercocebus_atys
ENSTNIG00000019246	blm	99	45.845	ENSCLAG00000012111	BLM	80	51.697	Chinchilla_lanigera
ENSTNIG00000019246	blm	70	64.295	ENSCSAG00000017040	BLM	76	64.968	Chlorocebus_sabaeus
ENSTNIG00000019246	blm	51	58.333	ENSCHOG00000006255	BLM	50	58.333	Choloepus_hoffmanni
ENSTNIG00000019246	blm	76	56.329	ENSCPBG00000025000	BLM	96	53.721	Chrysemys_picta_bellii
ENSTNIG00000019246	blm	87	55.019	ENSCGRG00001024897	Blm	99	46.341	Cricetulus_griseus_chok1gshd
ENSTNIG00000019246	blm	53	51.351	ENSCGRG00000016261	Blm	83	46.280	Cricetulus_griseus_crigri
ENSTNIG00000019246	blm	91	64.047	ENSCSEG00000013483	blm	97	63.622	Cynoglossus_semilaevis
ENSTNIG00000019246	blm	71	67.033	ENSCVAG00000017583	blm	97	66.667	Cyprinodon_variegatus
ENSTNIG00000019246	blm	99	54.696	ENSDARG00000077089	blm	99	55.103	Danio_rerio
ENSTNIG00000019246	blm	52	55.814	ENSETEG00000015019	BLM	61	55.814	Echinops_telfairi
ENSTNIG00000019246	blm	82	49.221	ENSEASG00005006727	BLM	80	49.124	Equus_asinus_asinus
ENSTNIG00000019246	blm	82	51.379	ENSECAG00000011405	BLM	80	51.203	Equus_caballus
ENSTNIG00000019246	blm	58	63.648	ENSEEUG00000001434	BLM	76	53.202	Erinaceus_europaeus
ENSTNIG00000019246	blm	99	57.104	ENSELUG00000019098	blm	92	63.762	Esox_lucius
ENSTNIG00000019246	blm	63	60.069	ENSFALG00000010981	BLM	74	62.885	Ficedula_albicollis
ENSTNIG00000019246	blm	81	58.442	ENSFDAG00000012658	BLM	89	58.442	Fukomys_damarensis
ENSTNIG00000019246	blm	99	64.607	ENSFHEG00000002553	blm	99	64.466	Fundulus_heteroclitus
ENSTNIG00000019246	blm	99	56.766	ENSGMOG00000016431	blm	98	67.787	Gadus_morhua
ENSTNIG00000019246	blm	84	50.452	ENSGALG00000008256	BLM	86	61.294	Gallus_gallus
ENSTNIG00000019246	blm	99	64.223	ENSGAFG00000001117	blm	99	64.103	Gambusia_affinis
ENSTNIG00000019246	blm	99	66.045	ENSGACG00000010863	blm	100	87.311	Gasterosteus_aculeatus
ENSTNIG00000019246	blm	65	55.032	ENSGAGG00000005383	BLM	85	65.719	Gopherus_agassizii
ENSTNIG00000019246	blm	62	72.746	ENSGGOG00000007710	BLM	76	74.593	Gorilla_gorilla
ENSTNIG00000019246	blm	99	67.065	ENSHBUG00000015943	blm	99	67.205	Haplochromis_burtoni
ENSTNIG00000019246	blm	64	61.779	ENSHGLG00000013231	BLM	87	61.899	Heterocephalus_glaber_female
ENSTNIG00000019246	blm	76	68.345	ENSHCOG00000011455	blm	99	68.538	Hippocampus_comes
ENSTNIG00000019246	blm	76	62.042	ENSIPUG00000000529	blm	77	70.167	Ictalurus_punctatus
ENSTNIG00000019246	blm	58	63.878	ENSSTOG00000005000	BLM	91	51.266	Ictidomys_tridecemlineatus
ENSTNIG00000019246	blm	58	58.228	ENSJJAG00000016322	Blm	99	49.906	Jaculus_jaculus
ENSTNIG00000019246	blm	99	65.360	ENSKMAG00000016608	blm	99	65.220	Kryptolebias_marmoratus
ENSTNIG00000019246	blm	61	78.450	ENSLBEG00000018729	blm	96	78.450	Labrus_bergylta
ENSTNIG00000019246	blm	68	65.000	ENSLACG00000006490	BLM	99	47.483	Latimeria_chalumnae
ENSTNIG00000019246	blm	87	69.623	ENSLOCG00000014302	blm	85	69.782	Lepisosteus_oculatus
ENSTNIG00000019246	blm	63	64.713	ENSMFAG00000042982	BLM	75	75.410	Macaca_fascicularis
ENSTNIG00000019246	blm	63	64.713	ENSMMUG00000019526	BLM	75	75.410	Macaca_mulatta
ENSTNIG00000019246	blm	58	64.459	ENSMNEG00000031251	BLM	75	75.082	Macaca_nemestrina
ENSTNIG00000019246	blm	70	60.842	ENSMLEG00000032934	BLM	75	61.224	Mandrillus_leucophaeus
ENSTNIG00000019246	blm	99	65.248	ENSMAMG00000008726	blm	99	65.153	Mastacembelus_armatus
ENSTNIG00000019246	blm	99	66.761	ENSMZEG00005022323	blm	99	66.926	Maylandia_zebra
ENSTNIG00000019246	blm	58	64.277	ENSMAUG00000008953	Blm	99	45.839	Mesocricetus_auratus
ENSTNIG00000019246	blm	81	51.965	ENSMICG00000034442	BLM	90	51.571	Microcebus_murinus
ENSTNIG00000019246	blm	85	65.345	ENSMOCG00000016367	Blm	84	65.601	Microtus_ochrogaster
ENSTNIG00000019246	blm	99	67.137	ENSMMOG00000006959	blm	99	67.066	Mola_mola
ENSTNIG00000019246	blm	68	61.796	ENSMODG00000019449	BLM	65	62.515	Monodelphis_domestica
ENSTNIG00000019246	blm	99	65.385	ENSMALG00000007323	blm	99	65.522	Monopterus_albus
ENSTNIG00000019246	blm	58	64.076	MGP_CAROLIEiJ_G0029907	Blm	55	64.086	Mus_caroli
ENSTNIG00000019246	blm	58	63.949	ENSMUSG00000030528	Blm	86	64.204	Mus_musculus
ENSTNIG00000019246	blm	85	64.834	MGP_PahariEiJ_G0013129	Blm	84	64.533	Mus_pahari
ENSTNIG00000019246	blm	58	64.076	MGP_SPRETEiJ_G0031009	Blm	55	64.132	Mus_spretus
ENSTNIG00000019246	blm	82	51.703	ENSMLUG00000014697	BLM	91	51.703	Myotis_lucifugus
ENSTNIG00000019246	blm	71	61.058	ENSNGAG00000001275	Blm	91	50.522	Nannospalax_galili
ENSTNIG00000019246	blm	99	65.471	ENSNBRG00000019702	blm	99	65.917	Neolamprologus_brichardi
ENSTNIG00000019246	blm	70	62.069	ENSNLEG00000012087	BLM	82	69.057	Nomascus_leucogenys
ENSTNIG00000019246	blm	54	64.276	ENSOPRG00000011667	BLM	60	64.276	Ochotona_princeps
ENSTNIG00000019246	blm	76	51.154	ENSODEG00000015373	BLM	99	51.154	Octodon_degus
ENSTNIG00000019246	blm	100	64.113	ENSONIG00000015193	blm	99	64.469	Oreochromis_niloticus
ENSTNIG00000019246	blm	56	65.415	ENSOANG00000009316	-	99	65.415	Ornithorhynchus_anatinus
ENSTNIG00000019246	blm	88	61.418	ENSOCUG00000013969	BLM	88	61.538	Oryctolagus_cuniculus
ENSTNIG00000019246	blm	99	65.652	ENSORLG00000008110	blm	99	65.106	Oryzias_latipes
ENSTNIG00000019246	blm	99	65.156	ENSORLG00020004812	blm	99	64.610	Oryzias_latipes_hni
ENSTNIG00000019246	blm	99	65.368	ENSORLG00015018640	blm	99	71.526	Oryzias_latipes_hsok
ENSTNIG00000019246	blm	99	63.354	ENSOMEG00000023545	blm	99	63.489	Oryzias_melastigma
ENSTNIG00000019246	blm	66	62.767	ENSOGAG00000005708	BLM	90	50.521	Otolemur_garnettii
ENSTNIG00000019246	blm	61	65.223	ENSOARG00000012875	BLM	74	65.096	Ovis_aries
ENSTNIG00000019246	blm	66	64.422	ENSPPRG00000002471	BLM	72	72.746	Panthera_pardus
ENSTNIG00000019246	blm	66	64.041	ENSPTIG00000016168	BLM	72	72.709	Panthera_tigris_altaica
ENSTNIG00000019246	blm	70	64.713	ENSPANG00000018572	BLM	75	75.410	Papio_anubis
ENSTNIG00000019246	blm	72	68.731	ENSPMGG00000006629	blm	100	68.731	Periophthalmus_magnuspinnatus
ENSTNIG00000019246	blm	85	65.223	ENSPEMG00000017348	Blm	99	46.282	Peromyscus_maniculatus_bairdii
ENSTNIG00000019246	blm	76	52.893	ENSPCIG00000006609	BLM	80	50.849	Phascolarctos_cinereus
ENSTNIG00000019246	blm	100	62.255	ENSPFOG00000005059	blm	93	69.291	Poecilia_formosa
ENSTNIG00000019246	blm	95	68.803	ENSPREG00000007715	blm	94	69.037	Poecilia_reticulata
ENSTNIG00000019246	blm	70	63.405	ENSPPYG00000006784	BLM	84	63.914	Pongo_abelii
ENSTNIG00000019246	blm	60	59.736	ENSPCAG00000008960	BLM	59	59.736	Procavia_capensis
ENSTNIG00000019246	blm	81	46.591	ENSPCOG00000000439	BLM	78	45.852	Propithecus_coquereli
ENSTNIG00000019246	blm	63	74.754	ENSPVAG00000011642	BLM	60	74.754	Pteropus_vampyrus
ENSTNIG00000019246	blm	99	59.212	ENSPNYG00000010956	blm	99	59.663	Pundamilia_nyererei
ENSTNIG00000019246	blm	100	56.237	ENSPNAG00000011714	blm	99	56.449	Pygocentrus_nattereri
ENSTNIG00000019246	blm	87	63.949	ENSRNOG00000011213	Blm	86	64.076	Rattus_norvegicus
ENSTNIG00000019246	blm	66	64.676	ENSRBIG00000029656	BLM	77	74.359	Rhinopithecus_bieti
ENSTNIG00000019246	blm	66	64.676	ENSRROG00000037871	BLM	77	74.359	Rhinopithecus_roxellana
ENSTNIG00000019246	blm	53	72.951	ENSSBOG00000030957	BLM	90	51.519	Saimiri_boliviensis_boliviensis
ENSTNIG00000019246	blm	81	51.298	ENSSHAG00000007988	BLM	69	60.748	Sarcophilus_harrisii
ENSTNIG00000019246	blm	76	62.572	ENSSFOG00015015462	blm	90	62.188	Scleropages_formosus
ENSTNIG00000019246	blm	99	64.947	ENSSMAG00000001120	blm	99	65.678	Scophthalmus_maximus
ENSTNIG00000019246	blm	99	65.366	ENSSDUG00000010955	blm	99	66.063	Seriola_dumerili
ENSTNIG00000019246	blm	99	65.063	ENSSLDG00000000634	blm	99	65.690	Seriola_lalandi_dorsalis
ENSTNIG00000019246	blm	58	59.949	ENSSARG00000006398	BLM	59	59.596	Sorex_araneus
ENSTNIG00000019246	blm	84	49.699	ENSSPUG00000000013	BLM	99	49.614	Sphenodon_punctatus
ENSTNIG00000019246	blm	99	67.672	ENSSPAG00000013999	blm	99	68.022	Stegastes_partitus
ENSTNIG00000019246	blm	67	64.891	ENSSSCG00000001816	BLM	83	65.027	Sus_scrofa
ENSTNIG00000019246	blm	81	46.957	ENSTGUG00000009959	-	74	54.790	Taeniopygia_guttata
ENSTNIG00000019246	blm	100	73.781	ENSTRUG00000019860	blm	99	73.852	Takifugu_rubripes
ENSTNIG00000019246	blm	67	65.223	ENSTTRG00000016386	BLM	64	64.930	Tursiops_truncatus
ENSTNIG00000019246	blm	72	64.578	ENSUMAG00000009105	BLM	96	67.034	Ursus_maritimus
ENSTNIG00000019246	blm	58	60.691	ENSVPAG00000000085	BLM	66	60.764	Vicugna_pacos
ENSTNIG00000019246	blm	72	63.187	ENSVVUG00000006402	BLM	82	76.965	Vulpes_vulpes
ENSTNIG00000019246	blm	100	47.307	ENSXETG00000007847	blm	100	46.703	Xenopus_tropicalis
ENSTNIG00000019246	blm	99	62.333	ENSXCOG00000020227	blm	99	62.062	Xiphophorus_couchianus
ENSTNIG00000019246	blm	99	64.191	ENSXMAG00000002951	blm	99	63.930	Xiphophorus_maculatus