EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000019278 (Gene tree)
Gene ID: -
Gene Symbol: im:7138535
Alias: -
Full Name: im:7138535
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1721 bases
Position: chr10:10986385-10988105
Accession: ZDB-GENE-041111-49
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000022479	DUF2465	PF10239.9	9.4e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022718	-	1032	-	ENSTNIP00000022479	344 (aa)	-	H3DPN0

Gene Model

Click here to download ENSTNIG00000019278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000019278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000019278	im:7138535	77	34.266	ENSTNIG00000017243	fam98b	69	33.818
ENSTNIG00000019278	im:7138535	65	31.064	ENSTNIG00000002436	-	88	31.064
ENSTNIG00000019278	im:7138535	69	31.102	ENSTNIG00000005464	fam98a	58	32.721

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000019278	im:7138535	74	33.457	ENSAPOG00000011449	fam98b	65	32.714	Acanthochromis_polyacanthus
ENSTNIG00000019278	im:7138535	96	60.383	ENSAPOG00000014173	-	98	58.197	Acanthochromis_polyacanthus
ENSTNIG00000019278	im:7138535	99	30.789	ENSAMEG00000010326	FAM98C	93	30.532	Ailuropoda_melanoleuca
ENSTNIG00000019278	im:7138535	74	32.714	ENSACIG00000015069	fam98b	64	32.210	Amphilophus_citrinellus
ENSTNIG00000019278	im:7138535	98	63.295	ENSACIG00000002526	im:7138535	93	64.263	Amphilophus_citrinellus
ENSTNIG00000019278	im:7138535	81	32.667	ENSAOCG00000018313	fam98b	69	31.930	Amphiprion_ocellaris
ENSTNIG00000019278	im:7138535	96	65.205	ENSAOCG00000002680	-	97	62.865	Amphiprion_ocellaris
ENSTNIG00000019278	im:7138535	96	65.205	ENSAPEG00000013731	-	97	62.865	Amphiprion_percula
ENSTNIG00000019278	im:7138535	81	32.333	ENSAPEG00000016398	fam98b	68	31.560	Amphiprion_percula
ENSTNIG00000019278	im:7138535	96	64.201	ENSATEG00000010695	-	98	64.201	Anabas_testudineus
ENSTNIG00000019278	im:7138535	81	31.667	ENSATEG00000011057	fam98b	74	32.333	Anabas_testudineus
ENSTNIG00000019278	im:7138535	69	30.651	ENSAPLG00000006881	FAM98B	65	31.900	Anas_platyrhynchos
ENSTNIG00000019278	im:7138535	83	33.333	ENSACAG00000002418	FAM98C	81	33.876	Anolis_carolinensis
ENSTNIG00000019278	im:7138535	77	32.414	ENSACAG00000015917	FAM98B	76	32.749	Anolis_carolinensis
ENSTNIG00000019278	im:7138535	92	63.889	ENSACLG00000020293	-	87	64.174	Astatotilapia_calliptera
ENSTNIG00000019278	im:7138535	81	30.263	ENSACLG00000013626	fam98b	63	30.037	Astatotilapia_calliptera
ENSTNIG00000019278	im:7138535	95	55.589	ENSACLG00000018753	-	88	56.646	Astatotilapia_calliptera
ENSTNIG00000019278	im:7138535	97	50.877	ENSAMXG00000042035	im:7138535	92	52.830	Astyanax_mexicanus
ENSTNIG00000019278	im:7138535	73	32.707	ENSAMXG00000014694	fam98b	60	33.582	Astyanax_mexicanus
ENSTNIG00000019278	im:7138535	56	35.610	ENSBTAG00000039593	FAM98C	66	30.037	Bos_taurus
ENSTNIG00000019278	im:7138535	81	32.441	ENSCAFG00000005919	FAM98C	80	30.086	Canis_familiaris
ENSTNIG00000019278	im:7138535	81	32.343	ENSCAFG00020017778	FAM98C	84	42.500	Canis_lupus_dingo
ENSTNIG00000019278	im:7138535	56	35.122	ENSCHIG00000019659	FAM98C	71	30.037	Capra_hircus
ENSTNIG00000019278	im:7138535	56	30.000	ENSCATG00000032790	-	65	30.542	Cercocebus_atys
ENSTNIG00000019278	im:7138535	69	30.116	ENSCHOG00000000476	FAM98A	50	32.143	Choloepus_hoffmanni
ENSTNIG00000019278	im:7138535	98	58.807	ENSCSEG00000009775	im:7138535	98	57.391	Cynoglossus_semilaevis
ENSTNIG00000019278	im:7138535	81	30.667	ENSCSEG00000004831	fam98b	61	30.855	Cynoglossus_semilaevis
ENSTNIG00000019278	im:7138535	69	31.873	ENSCVAG00000003248	fam98b	65	34.201	Cyprinodon_variegatus
ENSTNIG00000019278	im:7138535	69	57.143	ENSCVAG00000007841	-	68	56.735	Cyprinodon_variegatus
ENSTNIG00000019278	im:7138535	98	49.858	ENSDARG00000057245	im:7138535	93	50.311	Danio_rerio
ENSTNIG00000019278	im:7138535	81	32.997	ENSELUG00000006690	fam98b	83	31.737	Esox_lucius
ENSTNIG00000019278	im:7138535	98	53.561	ENSELUG00000019550	im:7138535	92	55.247	Esox_lucius
ENSTNIG00000019278	im:7138535	95	31.165	ENSFCAG00000000826	FAM98C	89	30.904	Felis_catus
ENSTNIG00000019278	im:7138535	77	31.034	ENSFALG00000005610	FAM98B	84	31.922	Ficedula_albicollis
ENSTNIG00000019278	im:7138535	90	59.621	ENSFHEG00000005365	-	92	59.627	Fundulus_heteroclitus
ENSTNIG00000019278	im:7138535	81	32.667	ENSFHEG00000020445	fam98b	65	33.457	Fundulus_heteroclitus
ENSTNIG00000019278	im:7138535	73	30.000	ENSGMOG00000015240	fam98a	56	30.147	Gadus_morhua
ENSTNIG00000019278	im:7138535	85	54.636	ENSGMOG00000011664	-	91	55.229	Gadus_morhua
ENSTNIG00000019278	im:7138535	85	30.368	ENSGALG00000009744	FAM98B	72	30.702	Gallus_gallus
ENSTNIG00000019278	im:7138535	99	62.108	ENSGAFG00000010684	-	97	61.538	Gambusia_affinis
ENSTNIG00000019278	im:7138535	81	33.667	ENSGAFG00000019645	fam98b	65	33.829	Gambusia_affinis
ENSTNIG00000019278	im:7138535	98	62.571	ENSGACG00000008979	-	98	62.391	Gasterosteus_aculeatus
ENSTNIG00000019278	im:7138535	85	30.864	ENSGAGG00000003971	FAM98B	80	31.563	Gopherus_agassizii
ENSTNIG00000019278	im:7138535	62	58.636	ENSHBUG00000018179	-	92	58.182	Haplochromis_burtoni
ENSTNIG00000019278	im:7138535	69	60.163	ENSHBUG00000016825	-	80	59.756	Haplochromis_burtoni
ENSTNIG00000019278	im:7138535	81	30.263	ENSHBUG00000017779	fam98b	63	30.037	Haplochromis_burtoni
ENSTNIG00000019278	im:7138535	77	31.741	ENSHCOG00000000259	fam98a	50	33.696	Hippocampus_comes
ENSTNIG00000019278	im:7138535	98	57.681	ENSHCOG00000017023	im:7138535	94	58.750	Hippocampus_comes
ENSTNIG00000019278	im:7138535	98	51.613	ENSIPUG00000024006	im:7138535	92	53.035	Ictalurus_punctatus
ENSTNIG00000019278	im:7138535	81	34.797	ENSIPUG00000006869	fam98b	69	34.459	Ictalurus_punctatus
ENSTNIG00000019278	im:7138535	81	33.784	ENSSTOG00000022450	FAM98C	71	30.769	Ictidomys_tridecemlineatus
ENSTNIG00000019278	im:7138535	69	30.620	ENSJJAG00000012732	Fam98a	50	32.246	Jaculus_jaculus
ENSTNIG00000019278	im:7138535	85	30.061	ENSJJAG00000009039	Fam98b	87	30.814	Jaculus_jaculus
ENSTNIG00000019278	im:7138535	98	60.870	ENSKMAG00000015503	im:7138535	92	62.500	Kryptolebias_marmoratus
ENSTNIG00000019278	im:7138535	81	31.699	ENSKMAG00000011017	fam98b	65	31.970	Kryptolebias_marmoratus
ENSTNIG00000019278	im:7138535	92	63.497	ENSLBEG00000026478	im:7138535	98	60.350	Labrus_bergylta
ENSTNIG00000019278	im:7138535	81	32.226	ENSLOCG00000012257	fam98b	84	32.239	Lepisosteus_oculatus
ENSTNIG00000019278	im:7138535	73	33.333	ENSLAFG00000020798	FAM98C	88	33.058	Loxodonta_africana
ENSTNIG00000019278	im:7138535	85	30.061	ENSMFAG00000016144	FAM98B	78	31.700	Macaca_fascicularis
ENSTNIG00000019278	im:7138535	85	30.061	ENSMMUG00000018332	FAM98B	74	31.700	Macaca_mulatta
ENSTNIG00000019278	im:7138535	81	31.667	ENSMAMG00000005919	fam98b	65	32.342	Mastacembelus_armatus
ENSTNIG00000019278	im:7138535	98	62.356	ENSMAMG00000009488	im:7138535	98	62.170	Mastacembelus_armatus
ENSTNIG00000019278	im:7138535	81	30.263	ENSMZEG00005002623	fam98b	63	30.037	Maylandia_zebra
ENSTNIG00000019278	im:7138535	91	64.286	ENSMZEG00005015389	-	93	64.577	Maylandia_zebra
ENSTNIG00000019278	im:7138535	85	61.794	ENSMZEG00005015997	-	92	62.081	Maylandia_zebra
ENSTNIG00000019278	im:7138535	81	30.897	ENSMICG00000004244	FAM98C	71	30.657	Microcebus_murinus
ENSTNIG00000019278	im:7138535	73	33.955	ENSMOCG00000018846	Fam98c	64	34.016	Microtus_ochrogaster
ENSTNIG00000019278	im:7138535	98	67.826	ENSMMOG00000012054	im:7138535	98	67.160	Mola_mola
ENSTNIG00000019278	im:7138535	74	31.250	ENSMMOG00000007979	fam98a	55	31.250	Mola_mola
ENSTNIG00000019278	im:7138535	68	34.137	ENSMODG00000013175	-	90	33.750	Monodelphis_domestica
ENSTNIG00000019278	im:7138535	74	31.970	ENSMALG00000016464	fam98b	60	31.970	Monopterus_albus
ENSTNIG00000019278	im:7138535	96	63.848	ENSMALG00000005360	-	98	63.743	Monopterus_albus
ENSTNIG00000019278	im:7138535	73	34.831	MGP_CAROLIEiJ_G0029473	Fam98c	86	43.443	Mus_caroli
ENSTNIG00000019278	im:7138535	73	34.082	ENSMUSG00000030590	Fam98c	86	43.443	Mus_musculus
ENSTNIG00000019278	im:7138535	69	35.827	MGP_PahariEiJ_G0012707	Fam98c	85	43.443	Mus_pahari
ENSTNIG00000019278	im:7138535	73	34.831	MGP_SPRETEiJ_G0030569	Fam98c	64	34.426	Mus_spretus
ENSTNIG00000019278	im:7138535	81	31.987	ENSMPUG00000017827	FAM98C	71	32.130	Mustela_putorius_furo
ENSTNIG00000019278	im:7138535	81	31.046	ENSNBRG00000023631	fam98b	54	32.218	Neolamprologus_brichardi
ENSTNIG00000019278	im:7138535	91	59.938	ENSNBRG00000008282	-	92	60.188	Neolamprologus_brichardi
ENSTNIG00000019278	im:7138535	76	31.690	ENSMEUG00000011451	FAM98C	75	31.159	Notamacropus_eugenii
ENSTNIG00000019278	im:7138535	67	34.263	ENSOPRG00000008937	FAM98C	61	34.764	Ochotona_princeps
ENSTNIG00000019278	im:7138535	81	30.872	ENSONIG00000001415	fam98b	61	30.403	Oreochromis_niloticus
ENSTNIG00000019278	im:7138535	91	64.465	ENSONIG00000008152	-	90	64.762	Oreochromis_niloticus
ENSTNIG00000019278	im:7138535	92	63.692	ENSONIG00000006268	-	93	64.263	Oreochromis_niloticus
ENSTNIG00000019278	im:7138535	69	30.233	ENSOCUG00000015457	FAM98A	51	31.884	Oryctolagus_cuniculus
ENSTNIG00000019278	im:7138535	86	30.091	ENSOCUG00000001786	FAM98B	73	30.448	Oryctolagus_cuniculus
ENSTNIG00000019278	im:7138535	98	54.467	ENSORLG00000007729	-	93	55.590	Oryzias_latipes
ENSTNIG00000019278	im:7138535	98	55.233	ENSORLG00020021618	-	93	55.590	Oryzias_latipes_hni
ENSTNIG00000019278	im:7138535	98	55.233	ENSORLG00015002830	-	93	56.426	Oryzias_latipes_hsok
ENSTNIG00000019278	im:7138535	95	58.982	ENSOMEG00000016172	im:7138535	93	59.190	Oryzias_melastigma
ENSTNIG00000019278	im:7138535	82	31.475	ENSOGAG00000025904	FAM98C	93	30.571	Otolemur_garnettii
ENSTNIG00000019278	im:7138535	85	30.556	ENSOGAG00000002801	FAM98B	76	31.579	Otolemur_garnettii
ENSTNIG00000019278	im:7138535	95	30.623	ENSPPRG00000010257	FAM98C	90	30.321	Panthera_pardus
ENSTNIG00000019278	im:7138535	85	30.061	ENSPANG00000019500	FAM98B	74	31.897	Papio_anubis
ENSTNIG00000019278	im:7138535	83	31.908	ENSPKIG00000022087	FAM98B	79	32.482	Paramormyrops_kingsleyae
ENSTNIG00000019278	im:7138535	90	50.625	ENSPKIG00000017343	im:7138535	94	51.235	Paramormyrops_kingsleyae
ENSTNIG00000019278	im:7138535	78	30.903	ENSPKIG00000009038	fam98a	54	32.353	Paramormyrops_kingsleyae
ENSTNIG00000019278	im:7138535	67	31.687	ENSPSIG00000006551	FAM98B	82	33.962	Pelodiscus_sinensis
ENSTNIG00000019278	im:7138535	91	51.250	ENSPMGG00000021240	-	93	51.090	Periophthalmus_magnuspinnatus
ENSTNIG00000019278	im:7138535	81	32.667	ENSPFOG00000014774	fam98b	64	31.970	Poecilia_formosa
ENSTNIG00000019278	im:7138535	91	60.856	ENSPFOG00000015605	im:7138535	97	60.290	Poecilia_formosa
ENSTNIG00000019278	im:7138535	98	61.254	ENSPLAG00000001683	im:7138535	97	60.472	Poecilia_latipinna
ENSTNIG00000019278	im:7138535	81	32.667	ENSPLAG00000020372	fam98b	65	31.970	Poecilia_latipinna
ENSTNIG00000019278	im:7138535	81	32.667	ENSPMEG00000010960	fam98b	65	31.970	Poecilia_mexicana
ENSTNIG00000019278	im:7138535	90	61.755	ENSPMEG00000014084	im:7138535	97	61.128	Poecilia_mexicana
ENSTNIG00000019278	im:7138535	69	32.567	ENSPMEG00000021610	fam98a	52	34.050	Poecilia_mexicana
ENSTNIG00000019278	im:7138535	81	31.000	ENSPREG00000007461	fam98b	74	30.743	Poecilia_reticulata
ENSTNIG00000019278	im:7138535	69	32.184	ENSPREG00000017792	fam98a	52	33.692	Poecilia_reticulata
ENSTNIG00000019278	im:7138535	90	61.875	ENSPREG00000022142	-	97	61.424	Poecilia_reticulata
ENSTNIG00000019278	im:7138535	82	31.579	ENSPCOG00000024380	FAM98C	73	31.408	Propithecus_coquereli
ENSTNIG00000019278	im:7138535	60	31.963	ENSPCOG00000025891	FAM98B	60	32.911	Propithecus_coquereli
ENSTNIG00000019278	im:7138535	65	32.218	ENSPNYG00000016866	fam98b	53	31.799	Pundamilia_nyererei
ENSTNIG00000019278	im:7138535	53	59.893	ENSPNYG00000003712	-	79	57.068	Pundamilia_nyererei
ENSTNIG00000019278	im:7138535	98	50.729	ENSPNAG00000019766	im:7138535	97	50.888	Pygocentrus_nattereri
ENSTNIG00000019278	im:7138535	77	31.271	ENSPNAG00000008893	fam98b	65	32.014	Pygocentrus_nattereri
ENSTNIG00000019278	im:7138535	73	35.955	ENSRNOG00000024036	Fam98c	64	36.066	Rattus_norvegicus
ENSTNIG00000019278	im:7138535	70	32.685	ENSRBIG00000036368	-	53	39.490	Rhinopithecus_bieti
ENSTNIG00000019278	im:7138535	56	35.922	ENSSHAG00000002208	-	77	37.158	Sarcophilus_harrisii
ENSTNIG00000019278	im:7138535	69	30.588	ENSSHAG00000018457	FAM98B	56	31.868	Sarcophilus_harrisii
ENSTNIG00000019278	im:7138535	78	35.461	ENSSFOG00015010673	fam98b	87	33.235	Scleropages_formosus
ENSTNIG00000019278	im:7138535	92	50.000	ENSSFOG00015007019	im:7138535	93	49.850	Scleropages_formosus
ENSTNIG00000019278	im:7138535	98	63.897	ENSSMAG00000016618	-	92	66.149	Scophthalmus_maximus
ENSTNIG00000019278	im:7138535	81	31.457	ENSSMAG00000018911	fam98b	67	32.103	Scophthalmus_maximus
ENSTNIG00000019278	im:7138535	96	66.471	ENSSDUG00000020558	im:7138535	98	65.588	Seriola_dumerili
ENSTNIG00000019278	im:7138535	52	36.082	ENSSDUG00000015289	fam98b	64	30.515	Seriola_dumerili
ENSTNIG00000019278	im:7138535	81	31.373	ENSSLDG00000007822	fam98b	65	32.000	Seriola_lalandi_dorsalis
ENSTNIG00000019278	im:7138535	96	65.882	ENSSLDG00000016057	-	98	65.000	Seriola_lalandi_dorsalis
ENSTNIG00000019278	im:7138535	85	30.556	ENSSPUG00000019102	FAM98B	76	30.659	Sphenodon_punctatus
ENSTNIG00000019278	im:7138535	96	65.882	ENSSPAG00000004694	im:7138535	98	64.809	Stegastes_partitus
ENSTNIG00000019278	im:7138535	81	32.333	ENSSPAG00000015480	fam98b	63	33.457	Stegastes_partitus
ENSTNIG00000019278	im:7138535	81	33.446	ENSSSCG00000002959	FAM98C	72	33.333	Sus_scrofa
ENSTNIG00000019278	im:7138535	86	30.909	ENSTGUG00000011744	FAM98B	71	31.024	Taeniopygia_guttata
ENSTNIG00000019278	im:7138535	96	74.850	ENSTRUG00000015519	im:7138535	98	74.850	Takifugu_rubripes
ENSTNIG00000019278	im:7138535	82	33.654	ENSTRUG00000013778	fam98b	85	31.845	Takifugu_rubripes
ENSTNIG00000019278	im:7138535	81	32.776	ENSUAMG00000014001	FAM98C	71	32.609	Ursus_americanus
ENSTNIG00000019278	im:7138535	69	30.233	ENSUMAG00000015450	-	51	31.884	Ursus_maritimus
ENSTNIG00000019278	im:7138535	90	31.563	ENSXETG00000002820	fam98a	82	31.563	Xenopus_tropicalis
ENSTNIG00000019278	im:7138535	87	31.325	ENSXETG00000018061	fam98b	85	31.871	Xenopus_tropicalis
ENSTNIG00000019278	im:7138535	90	62.382	ENSXCOG00000012756	im:7138535	97	61.310	Xiphophorus_couchianus
ENSTNIG00000019278	im:7138535	81	30.667	ENSXCOG00000000576	fam98b	65	31.970	Xiphophorus_couchianus
ENSTNIG00000019278	im:7138535	90	61.950	ENSXMAG00000008723	im:7138535	97	60.896	Xiphophorus_maculatus
ENSTNIG00000019278	im:7138535	81	31.475	ENSXMAG00000010344	fam98b	84	30.141	Xiphophorus_maculatus