EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000019317 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5334 bases
Position: chr10:11542341-11547674
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000022519	TUDOR	PF00567.24	9.9e-98	1	4
ENSTNIP00000022519	TUDOR	PF00567.24	9.9e-98	2	4
ENSTNIP00000022519	TUDOR	PF00567.24	9.9e-98	3	4
ENSTNIP00000022519	TUDOR	PF00567.24	9.9e-98	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000022758	-	3905	-	ENSTNIP00000022519	1173 (aa)	-	H3DPS0

Gene Model

Click here to download ENSTNIG00000019317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000019317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000019317	-	71	32.000	ENSTNIG00000000258	si:dkeyp-93d12.1	73	30.156

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000019317	-	88	33.333	ENSG00000180113	TDRD6	66	33.333	Homo_sapiens
ENSTNIG00000019317	-	88	40.000	ENSAPOG00000023805	tdrd6	78	40.000	Acanthochromis_polyacanthus
ENSTNIG00000019317	-	88	44.424	ENSAPOG00000020893	-	77	44.147	Acanthochromis_polyacanthus
ENSTNIG00000019317	-	88	32.500	ENSAMEG00000001687	TDRD6	66	32.500	Ailuropoda_melanoleuca
ENSTNIG00000019317	-	93	52.128	ENSACIG00000009194	-	88	52.128	Amphilophus_citrinellus
ENSTNIG00000019317	-	90	30.268	ENSACIG00000012633	-	99	40.000	Amphilophus_citrinellus
ENSTNIG00000019317	-	88	33.805	ENSAOCG00000013365	tdrd6	65	33.688	Amphiprion_ocellaris
ENSTNIG00000019317	-	89	44.004	ENSAOCG00000017073	-	80	44.004	Amphiprion_ocellaris
ENSTNIG00000019317	-	88	33.805	ENSAPEG00000015328	tdrd6	75	33.805	Amphiprion_percula
ENSTNIG00000019317	-	89	43.659	ENSAPEG00000011090	-	77	43.659	Amphiprion_percula
ENSTNIG00000019317	-	89	52.332	ENSATEG00000001389	si:ch211-189e2.3	94	45.902	Anabas_testudineus
ENSTNIG00000019317	-	85	34.375	ENSATEG00000016586	tdrd6	64	34.375	Anabas_testudineus
ENSTNIG00000019317	-	88	31.646	ENSANAG00000004725	TDRD6	64	31.646	Aotus_nancymaae
ENSTNIG00000019317	-	89	39.891	ENSACLG00000007717	-	76	39.362	Astatotilapia_calliptera
ENSTNIG00000019317	-	89	43.368	ENSACLG00000003092	-	84	43.596	Astatotilapia_calliptera
ENSTNIG00000019317	-	89	40.838	ENSAMXG00000010029	tdrd6	71	40.838	Astyanax_mexicanus
ENSTNIG00000019317	-	87	39.056	ENSAMXG00000032110	si:ch211-189e2.3	86	39.056	Astyanax_mexicanus
ENSTNIG00000019317	-	88	31.116	ENSBTAG00000009978	TDRD6	64	30.000	Bos_taurus
ENSTNIG00000019317	-	87	39.806	ENSCAFG00000002036	TDRD6	64	34.667	Canis_familiaris
ENSTNIG00000019317	-	87	39.806	ENSCAFG00020012649	TDRD6	64	34.667	Canis_lupus_dingo
ENSTNIG00000019317	-	88	33.702	ENSCHIG00000012400	TDRD6	64	33.702	Capra_hircus
ENSTNIG00000019317	-	91	32.500	ENSTSYG00000007971	TDRD6	76	32.500	Carlito_syrichta
ENSTNIG00000019317	-	89	40.777	ENSCPOG00000015698	TDRD6	65	30.000	Cavia_porcellus
ENSTNIG00000019317	-	91	32.500	ENSCCAG00000027454	TDRD6	65	32.500	Cebus_capucinus
ENSTNIG00000019317	-	88	34.513	ENSCATG00000023914	TDRD6	64	34.513	Cercocebus_atys
ENSTNIG00000019317	-	87	33.333	ENSCLAG00000009187	TDRD6	65	33.333	Chinchilla_lanigera
ENSTNIG00000019317	-	88	34.513	ENSCSAG00000012578	TDRD6	63	34.513	Chlorocebus_sabaeus
ENSTNIG00000019317	-	88	38.835	ENSCHOG00000000169	TDRD6	68	34.014	Choloepus_hoffmanni
ENSTNIG00000019317	-	87	30.667	ENSCANG00000030562	TDRD6	64	30.667	Colobus_angolensis_palliatus
ENSTNIG00000019317	-	88	41.871	ENSCSEG00000003495	-	96	41.871	Cynoglossus_semilaevis
ENSTNIG00000019317	-	89	31.986	ENSCSEG00000019023	tdrd6	63	31.690	Cynoglossus_semilaevis
ENSTNIG00000019317	-	82	40.714	ENSCVAG00000001528	-	78	40.714	Cyprinodon_variegatus
ENSTNIG00000019317	-	88	39.901	ENSDARG00000070052	tdrd6	75	39.901	Danio_rerio
ENSTNIG00000019317	-	87	47.959	ENSDARG00000089954	si:ch211-189e2.3	79	47.959	Danio_rerio
ENSTNIG00000019317	-	86	32.500	ENSDNOG00000042799	TDRD6	69	32.500	Dasypus_novemcinctus
ENSTNIG00000019317	-	82	39.806	ENSETEG00000015260	TDRD6	66	31.000	Echinops_telfairi
ENSTNIG00000019317	-	88	36.364	ENSECAG00000024889	TDRD6	70	36.364	Equus_caballus
ENSTNIG00000019317	-	89	43.915	ENSELUG00000018873	-	96	34.104	Esox_lucius
ENSTNIG00000019317	-	87	34.500	ENSELUG00000010350	tdrd6	68	34.500	Esox_lucius
ENSTNIG00000019317	-	88	33.529	ENSFCAG00000023001	TDRD6	64	33.529	Felis_catus
ENSTNIG00000019317	-	81	36.486	ENSFDAG00000005622	TDRD6	68	36.486	Fukomys_damarensis
ENSTNIG00000019317	-	90	42.328	ENSFHEG00000022915	tdrd6	68	42.328	Fundulus_heteroclitus
ENSTNIG00000019317	-	69	36.496	ENSGMOG00000012765	-	99	36.496	Gadus_morhua
ENSTNIG00000019317	-	89	40.000	ENSGMOG00000005132	tdrd6	99	32.606	Gadus_morhua
ENSTNIG00000019317	-	74	33.750	ENSGALG00000044279	-	58	33.750	Gallus_gallus
ENSTNIG00000019317	-	89	33.217	ENSGAFG00000009328	tdrd6	59	33.217	Gambusia_affinis
ENSTNIG00000019317	-	88	41.146	ENSGACG00000004820	tdrd6	88	41.146	Gasterosteus_aculeatus
ENSTNIG00000019317	-	88	33.333	ENSGGOG00000012971	TDRD6	65	33.333	Gorilla_gorilla
ENSTNIG00000019317	-	89	43.330	ENSHBUG00000000351	-	80	43.330	Haplochromis_burtoni
ENSTNIG00000019317	-	89	39.891	ENSHBUG00000012579	tdrd6	70	39.891	Haplochromis_burtoni
ENSTNIG00000019317	-	87	32.500	ENSHGLG00000019324	TDRD6	71	32.500	Heterocephalus_glaber_female
ENSTNIG00000019317	-	87	32.500	ENSHGLG00100006669	TDRD6	71	32.500	Heterocephalus_glaber_male
ENSTNIG00000019317	-	92	39.548	ENSHCOG00000019950	tdrd6	90	39.548	Hippocampus_comes
ENSTNIG00000019317	-	87	41.058	ENSHCOG00000017328	-	77	41.058	Hippocampus_comes
ENSTNIG00000019317	-	88	41.500	ENSIPUG00000023805	tdrd6	76	41.500	Ictalurus_punctatus
ENSTNIG00000019317	-	92	34.659	ENSJJAG00000022534	Tdrd6	62	34.659	Jaculus_jaculus
ENSTNIG00000019317	-	79	32.799	ENSKMAG00000003969	-	90	32.863	Kryptolebias_marmoratus
ENSTNIG00000019317	-	88	41.547	ENSKMAG00000015790	-	72	41.436	Kryptolebias_marmoratus
ENSTNIG00000019317	-	87	34.099	ENSLBEG00000022955	tdrd6	73	34.099	Labrus_bergylta
ENSTNIG00000019317	-	88	48.533	ENSLBEG00000004565	-	80	48.533	Labrus_bergylta
ENSTNIG00000019317	-	90	34.185	ENSLOCG00000016482	tdrd6	86	34.185	Lepisosteus_oculatus
ENSTNIG00000019317	-	88	33.628	ENSMFAG00000002656	TDRD6	64	33.628	Macaca_fascicularis
ENSTNIG00000019317	-	88	33.628	ENSMMUG00000019252	TDRD6	64	33.628	Macaca_mulatta
ENSTNIG00000019317	-	91	34.513	ENSMNEG00000039397	TDRD6	66	34.513	Macaca_nemestrina
ENSTNIG00000019317	-	88	33.628	ENSMLEG00000039418	TDRD6	68	33.628	Mandrillus_leucophaeus
ENSTNIG00000019317	-	88	45.798	ENSMAMG00000000227	-	83	45.798	Mastacembelus_armatus
ENSTNIG00000019317	-	88	33.624	ENSMAMG00000007725	tdrd6	74	33.449	Mastacembelus_armatus
ENSTNIG00000019317	-	89	39.362	ENSMZEG00005003573	tdrd6	69	39.891	Maylandia_zebra
ENSTNIG00000019317	-	89	43.281	ENSMZEG00005012754	-	84	43.281	Maylandia_zebra
ENSTNIG00000019317	-	86	34.078	ENSMGAG00000014281	-	72	34.375	Meleagris_gallopavo
ENSTNIG00000019317	-	92	39.806	ENSMAUG00000001192	Tdrd6	63	33.884	Mesocricetus_auratus
ENSTNIG00000019317	-	88	33.628	ENSMICG00000030777	TDRD6	73	33.628	Microcebus_murinus
ENSTNIG00000019317	-	88	31.707	ENSMOCG00000005983	Tdrd6	64	31.707	Microtus_ochrogaster
ENSTNIG00000019317	-	85	37.624	ENSMMOG00000015651	tdrd6	80	37.624	Mola_mola
ENSTNIG00000019317	-	88	30.539	ENSMODG00000018889	TDRD6	52	30.539	Monodelphis_domestica
ENSTNIG00000019317	-	87	54.348	ENSMALG00000019184	-	88	45.335	Monopterus_albus
ENSTNIG00000019317	-	88	32.566	ENSMALG00000019679	tdrd6	73	32.174	Monopterus_albus
ENSTNIG00000019317	-	88	30.645	MGP_CAROLIEiJ_G0021632	Tdrd6	62	30.645	Mus_caroli
ENSTNIG00000019317	-	84	39.806	ENSMUSG00000040140	Tdrd6	63	30.328	Mus_musculus
ENSTNIG00000019317	-	90	31.148	MGP_SPRETEiJ_G0022544	Tdrd6	63	31.148	Mus_spretus
ENSTNIG00000019317	-	85	39.806	ENSMPUG00000012444	TDRD6	65	34.167	Mustela_putorius_furo
ENSTNIG00000019317	-	81	42.553	ENSMLUG00000015316	TDRD6	65	33.058	Myotis_lucifugus
ENSTNIG00000019317	-	90	38.974	ENSNBRG00000018258	tdrd6	87	40.426	Neolamprologus_brichardi
ENSTNIG00000019317	-	87	42.947	ENSNBRG00000007041	-	79	43.037	Neolamprologus_brichardi
ENSTNIG00000019317	-	88	32.743	ENSNLEG00000004513	TDRD6	64	32.743	Nomascus_leucogenys
ENSTNIG00000019317	-	88	31.053	ENSMEUG00000014304	TDRD6	55	31.356	Notamacropus_eugenii
ENSTNIG00000019317	-	87	40.556	ENSONIG00000001218	tdrd6	99	40.556	Oreochromis_niloticus
ENSTNIG00000019317	-	77	32.500	ENSOANG00000008274	-	63	32.500	Ornithorhynchus_anatinus
ENSTNIG00000019317	-	88	40.777	ENSOCUG00000000760	TDRD6	65	33.628	Oryctolagus_cuniculus
ENSTNIG00000019317	-	85	30.435	ENSORLG00000015951	amh	58	30.435	Oryzias_latipes
ENSTNIG00000019317	-	85	37.799	ENSORLG00020005897	amh	50	37.799	Oryzias_latipes_hni
ENSTNIG00000019317	-	85	31.866	ENSORLG00015001382	amh	58	31.866	Oryzias_latipes_hsok
ENSTNIG00000019317	-	89	32.203	ENSOMEG00000014481	tdrd6	58	32.203	Oryzias_melastigma
ENSTNIG00000019317	-	88	33.333	ENSOGAG00000000404	TDRD6	63	33.333	Otolemur_garnettii
ENSTNIG00000019317	-	88	34.659	ENSOARG00000010906	TDRD6	74	34.659	Ovis_aries
ENSTNIG00000019317	-	88	33.333	ENSPPRG00000007625	TDRD6	64	33.333	Panthera_pardus
ENSTNIG00000019317	-	88	33.333	ENSPTIG00000013853	TDRD6	72	33.333	Panthera_tigris_altaica
ENSTNIG00000019317	-	88	33.333	ENSPTRG00000018237	TDRD6	65	33.333	Pan_troglodytes
ENSTNIG00000019317	-	88	34.513	ENSPANG00000005761	TDRD6	65	34.513	Papio_anubis
ENSTNIG00000019317	-	89	41.361	ENSPKIG00000012265	tdrd6	70	41.361	Paramormyrops_kingsleyae
ENSTNIG00000019317	-	87	40.426	ENSPMGG00000014626	tdrd6	95	40.426	Periophthalmus_magnuspinnatus
ENSTNIG00000019317	-	88	41.837	ENSPMGG00000000674	-	83	41.837	Periophthalmus_magnuspinnatus
ENSTNIG00000019317	-	86	36.296	ENSPMAG00000008166	-	82	33.775	Petromyzon_marinus
ENSTNIG00000019317	-	89	39.429	ENSPFOG00000012487	tdrd6	90	39.429	Poecilia_formosa
ENSTNIG00000019317	-	89	33.275	ENSPLAG00000020472	tdrd6	67	33.275	Poecilia_latipinna
ENSTNIG00000019317	-	89	33.737	ENSPMEG00000000075	tdrd6	58	33.737	Poecilia_mexicana
ENSTNIG00000019317	-	89	40.933	ENSPREG00000018829	tdrd6	69	40.933	Poecilia_reticulata
ENSTNIG00000019317	-	86	33.333	ENSPCOG00000011534	TDRD6	65	33.333	Propithecus_coquereli
ENSTNIG00000019317	-	88	32.479	ENSPVAG00000000587	TDRD6	64	32.479	Pteropus_vampyrus
ENSTNIG00000019317	-	87	37.379	ENSPNYG00000021847	tdrd6	86	37.379	Pundamilia_nyererei
ENSTNIG00000019317	-	87	44.464	ENSPNYG00000008466	-	83	44.702	Pundamilia_nyererei
ENSTNIG00000019317	-	88	42.105	ENSPNAG00000008860	tdrd6	78	42.105	Pygocentrus_nattereri
ENSTNIG00000019317	-	89	36.236	ENSPNAG00000000359	si:ch211-189e2.3	80	36.236	Pygocentrus_nattereri
ENSTNIG00000019317	-	88	34.513	ENSRBIG00000030252	TDRD6	64	34.513	Rhinopithecus_bieti
ENSTNIG00000019317	-	88	34.513	ENSRROG00000043964	TDRD6	64	34.513	Rhinopithecus_roxellana
ENSTNIG00000019317	-	91	31.841	ENSSHAG00000016901	TDRD6	72	31.841	Sarcophilus_harrisii
ENSTNIG00000019317	-	88	33.625	ENSSFOG00015014356	tdrd6	59	33.625	Scleropages_formosus
ENSTNIG00000019317	-	87	32.812	ENSSMAG00000004490	tdrd6	76	32.812	Scophthalmus_maximus
ENSTNIG00000019317	-	88	43.578	ENSSMAG00000014450	-	95	43.578	Scophthalmus_maximus
ENSTNIG00000019317	-	89	51.402	ENSSDUG00000007597	-	80	51.402	Seriola_dumerili
ENSTNIG00000019317	-	88	33.505	ENSSDUG00000006559	tdrd6	68	33.621	Seriola_dumerili
ENSTNIG00000019317	-	87	54.301	ENSSLDG00000002178	-	81	54.301	Seriola_lalandi_dorsalis
ENSTNIG00000019317	-	88	38.813	ENSSLDG00000004470	tdrd6	70	38.813	Seriola_lalandi_dorsalis
ENSTNIG00000019317	-	89	36.036	ENSSPAG00000013194	tdrd6	87	36.036	Stegastes_partitus
ENSTNIG00000019317	-	85	57.917	ENSTRUG00000023197	-	76	58.194	Takifugu_rubripes
ENSTNIG00000019317	-	88	31.667	ENSTTRG00000008440	TDRD6	68	31.667	Tursiops_truncatus
ENSTNIG00000019317	-	88	32.500	ENSUAMG00000014941	TDRD6	66	32.500	Ursus_americanus
ENSTNIG00000019317	-	88	32.500	ENSUMAG00000005127	TDRD6	69	33.092	Ursus_maritimus
ENSTNIG00000019317	-	81	39.806	ENSVVUG00000029302	TDRD6	66	34.667	Vulpes_vulpes
ENSTNIG00000019317	-	87	36.932	ENSXETG00000016255	tdrd6	77	36.932	Xenopus_tropicalis
ENSTNIG00000019317	-	89	34.400	ENSXCOG00000008476	tdrd6	94	34.400	Xiphophorus_couchianus
ENSTNIG00000019317	-	89	33.992	ENSXMAG00000025787	tdrd6	72	33.992	Xiphophorus_maculatus