EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000019815 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 832 bases
Position: chrUn_random:103360385-103361216
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000023082	KH_1	PF00013.29	2.3e-33	1	2
ENSTNIP00000023082	KH_1	PF00013.29	2.3e-33	2	2
ENSTNIP00000023082	KH_2	PF07650.17	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000023324	-	523	-	ENSTNIP00000023082	169 (aa)	-	H3DRD2

Gene Model

Click here to download ENSTNIG00000019815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000019815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000019815	-	77	34.586	ENSTNIG00000003546	zgc:110045	63	34.586
ENSTNIG00000019815	-	85	36.364	ENSTNIG00000010615	pcbp3	77	36.364
ENSTNIG00000019815	-	68	38.095	ENSTNIG00000008872	-	51	38.095
ENSTNIG00000019815	-	86	69.863	ENSTNIG00000009019	fubp3	53	69.863
ENSTNIG00000019815	-	87	68.707	ENSTNIG00000005858	-	61	68.243
ENSTNIG00000019815	-	83	42.857	ENSTNIG00000012585	pcbp2	60	42.857
ENSTNIG00000019815	-	91	58.824	ENSTNIG00000014067	khsrp	60	56.790

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000019815	-	88	84.459	ENSG00000162613	FUBP1	50	84.459	Homo_sapiens
ENSTNIG00000019815	-	99	86.310	ENSAPOG00000014845	fubp1	56	86.310	Acanthochromis_polyacanthus
ENSTNIG00000019815	-	90	93.506	ENSAPEG00000012232	fubp1	54	93.506	Amphiprion_percula
ENSTNIG00000019815	-	88	84.459	ENSAPLG00000005965	FUBP1	56	84.459	Anas_platyrhynchos
ENSTNIG00000019815	-	85	88.148	ENSAMXG00000005525	fubp1	58	88.148	Astyanax_mexicanus
ENSTNIG00000019815	-	88	84.459	ENSCJAG00000007062	FUBP1	50	84.459	Callithrix_jacchus
ENSTNIG00000019815	-	88	84.459	ENSCAFG00000020361	FUBP1	50	84.459	Canis_familiaris
ENSTNIG00000019815	-	88	84.459	ENSTSYG00000000148	FUBP1	53	84.459	Carlito_syrichta
ENSTNIG00000019815	-	88	84.459	ENSCAPG00000011052	-	61	84.459	Cavia_aperea
ENSTNIG00000019815	-	88	84.459	ENSCATG00000042126	FUBP1	50	84.459	Cercocebus_atys
ENSTNIG00000019815	-	88	84.459	ENSCLAG00000005621	FUBP1	53	84.459	Chinchilla_lanigera
ENSTNIG00000019815	-	88	84.459	ENSCSAG00000001402	FUBP1	50	84.459	Chlorocebus_sabaeus
ENSTNIG00000019815	-	88	84.459	ENSCGRG00001007103	Fubp1	54	84.459	Cricetulus_griseus_chok1gshd
ENSTNIG00000019815	-	88	84.459	ENSCGRG00000003372	Fubp1	56	84.459	Cricetulus_griseus_crigri
ENSTNIG00000019815	-	96	86.585	ENSCVAG00000014487	fubp1	54	86.585	Cyprinodon_variegatus
ENSTNIG00000019815	-	87	91.156	ENSDARG00000029248	fubp1	52	91.156	Danio_rerio
ENSTNIG00000019815	-	88	84.459	ENSDORG00000016534	Fubp1	55	78.750	Dipodomys_ordii
ENSTNIG00000019815	-	98	63.095	ENSEBUG00000016143	fubp1	50	63.095	Eptatretus_burgeri
ENSTNIG00000019815	-	87	88.079	ENSELUG00000007990	fubp1	52	88.079	Esox_lucius
ENSTNIG00000019815	-	87	94.558	ENSFHEG00000005230	fubp1	60	89.855	Fundulus_heteroclitus
ENSTNIG00000019815	-	88	84.459	ENSGALG00000008939	FUBP1	62	84.459	Gallus_gallus
ENSTNIG00000019815	-	87	94.558	ENSGAFG00000020972	fubp1	51	94.521	Gambusia_affinis
ENSTNIG00000019815	-	95	90.625	ENSGACG00000016563	fubp1	55	90.625	Gasterosteus_aculeatus
ENSTNIG00000019815	-	87	97.279	ENSHBUG00000009835	fubp1	57	97.260	Haplochromis_burtoni
ENSTNIG00000019815	-	88	79.730	ENSHGLG00000002808	-	54	79.730	Heterocephalus_glaber_female
ENSTNIG00000019815	-	88	84.459	ENSHGLG00000008415	-	50	84.459	Heterocephalus_glaber_female
ENSTNIG00000019815	-	88	79.730	ENSHGLG00100001414	-	54	79.730	Heterocephalus_glaber_male
ENSTNIG00000019815	-	88	84.459	ENSHGLG00100003417	-	50	84.459	Heterocephalus_glaber_male
ENSTNIG00000019815	-	87	94.558	ENSHCOG00000000910	fubp1	50	94.558	Hippocampus_comes
ENSTNIG00000019815	-	87	89.796	ENSIPUG00000009896	fubp1	50	90.845	Ictalurus_punctatus
ENSTNIG00000019815	-	88	84.459	ENSSTOG00000014312	FUBP1	51	84.459	Ictidomys_tridecemlineatus
ENSTNIG00000019815	-	88	84.459	ENSJJAG00000020069	Fubp1	50	84.459	Jaculus_jaculus
ENSTNIG00000019815	-	87	95.918	ENSLBEG00000012700	fubp1	54	95.918	Labrus_bergylta
ENSTNIG00000019815	-	88	84.459	ENSLAFG00000003273	FUBP1	59	82.667	Loxodonta_africana
ENSTNIG00000019815	-	88	84.459	ENSMFAG00000031825	FUBP1	50	84.459	Macaca_fascicularis
ENSTNIG00000019815	-	88	84.459	ENSMMUG00000002899	FUBP1	51	84.459	Macaca_mulatta
ENSTNIG00000019815	-	88	84.459	ENSMNEG00000045212	FUBP1	50	84.459	Macaca_nemestrina
ENSTNIG00000019815	-	88	83.108	ENSMGAG00000009424	FUBP1	56	83.108	Meleagris_gallopavo
ENSTNIG00000019815	-	88	84.459	ENSMAUG00000016428	Fubp1	51	84.459	Mesocricetus_auratus
ENSTNIG00000019815	-	88	84.459	ENSMOCG00000014751	Fubp1	52	84.459	Microtus_ochrogaster
ENSTNIG00000019815	-	89	92.715	ENSMMOG00000019463	fubp1	59	92.715	Mola_mola
ENSTNIG00000019815	-	88	84.459	ENSMODG00000020804	FUBP1	54	84.459	Monodelphis_domestica
ENSTNIG00000019815	-	87	91.837	ENSMALG00000015173	fubp1	54	67.089	Monopterus_albus
ENSTNIG00000019815	-	88	84.459	MGP_CAROLIEiJ_G0025740	Fubp1	62	84.459	Mus_caroli
ENSTNIG00000019815	-	88	84.459	ENSMUSG00000028034	Fubp1	62	84.459	Mus_musculus
ENSTNIG00000019815	-	88	84.459	MGP_PahariEiJ_G0027191	Fubp1	62	84.459	Mus_pahari
ENSTNIG00000019815	-	88	84.459	MGP_SPRETEiJ_G0026693	Fubp1	62	84.459	Mus_spretus
ENSTNIG00000019815	-	88	84.459	ENSNGAG00000014302	Fubp1	54	84.459	Nannospalax_galili
ENSTNIG00000019815	-	89	75.484	ENSNLEG00000009772	FUBP1	52	75.484	Nomascus_leucogenys
ENSTNIG00000019815	-	88	84.459	ENSOANG00000009777	FUBP1	55	84.459	Ornithorhynchus_anatinus
ENSTNIG00000019815	-	88	84.459	ENSPPRG00000000413	FUBP1	50	84.459	Panthera_pardus
ENSTNIG00000019815	-	88	84.459	ENSPTIG00000019450	FUBP1	50	84.459	Panthera_tigris_altaica
ENSTNIG00000019815	-	87	83.784	ENSPSIG00000012965	FUBP1	55	83.784	Pelodiscus_sinensis
ENSTNIG00000019815	-	87	87.162	ENSPMGG00000009060	fubp1	56	87.162	Periophthalmus_magnuspinnatus
ENSTNIG00000019815	-	88	84.459	ENSPEMG00000021802	Fubp1	52	84.459	Peromyscus_maniculatus_bairdii
ENSTNIG00000019815	-	86	64.103	ENSPMAG00000001644	-	60	67.568	Petromyzon_marinus
ENSTNIG00000019815	-	87	94.558	ENSPMEG00000004747	fubp1	51	94.558	Poecilia_mexicana
ENSTNIG00000019815	-	87	94.558	ENSPREG00000017911	fubp1	59	94.656	Poecilia_reticulata
ENSTNIG00000019815	-	88	84.459	ENSPPYG00000001219	-	51	84.459	Pongo_abelii
ENSTNIG00000019815	-	93	79.874	ENSPCOG00000024974	FUBP1	50	84.459	Propithecus_coquereli
ENSTNIG00000019815	-	91	94.771	ENSPNYG00000004552	fubp1	50	94.771	Pundamilia_nyererei
ENSTNIG00000019815	-	100	78.698	ENSPNAG00000016207	fubp1	67	78.698	Pygocentrus_nattereri
ENSTNIG00000019815	-	88	84.459	ENSRNOG00000043370	Fubp1	50	84.459	Rattus_norvegicus
ENSTNIG00000019815	-	88	84.459	ENSRBIG00000042950	FUBP1	50	84.459	Rhinopithecus_bieti
ENSTNIG00000019815	-	88	84.459	ENSRROG00000043534	FUBP1	50	84.459	Rhinopithecus_roxellana
ENSTNIG00000019815	-	88	84.459	ENSSBOG00000027299	FUBP1	56	83.969	Saimiri_boliviensis_boliviensis
ENSTNIG00000019815	-	88	84.459	ENSSHAG00000005367	FUBP1	61	84.459	Sarcophilus_harrisii
ENSTNIG00000019815	-	99	86.310	ENSSLDG00000022863	fubp1	50	86.310	Seriola_lalandi_dorsalis
ENSTNIG00000019815	-	88	84.459	ENSTGUG00000006841	FUBP1	57	84.459	Taeniopygia_guttata
ENSTNIG00000019815	-	88	84.459	ENSVPAG00000004709	FUBP1	50	84.459	Vicugna_pacos
ENSTNIG00000019815	-	88	93.289	ENSXCOG00000019354	fubp1	50	93.289	Xiphophorus_couchianus
ENSTNIG00000019815	-	87	94.558	ENSXMAG00000007168	fubp1	60	94.656	Xiphophorus_maculatus