EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000000023 (Gene tree)
Gene ID: 101073343
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5308 bases
Position: chrHE593298.1:1740-7047
Accession: 101073343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000000050	ARS2	PF04959.13	4.7e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000000050	-	2607	XM_011621634	ENSTRUP00000000050	822 (aa)	XP_011619936	H2RIT7

Gene Model

Click here to download ENSTRUG00000000023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000000023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000000023	-	50	61.009	ENSTRUG00000016075	srrt	90	53.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000000023	-	51	60.682	ENSG00000087087	SRRT	98	67.391	Homo_sapiens
ENSTRUG00000000023	-	51	61.959	ENSAPOG00000002304	srrt	90	54.275	Acanthochromis_polyacanthus
ENSTRUG00000000023	-	51	60.641	ENSAMEG00000014506	SRRT	90	52.761	Ailuropoda_melanoleuca
ENSTRUG00000000023	-	93	55.045	ENSACIG00000015795	srrt	89	54.592	Amphilophus_citrinellus
ENSTRUG00000000023	-	91	77.308	ENSAOCG00000009189	-	90	78.333	Amphiprion_ocellaris
ENSTRUG00000000023	-	51	61.416	ENSAOCG00000009693	srrt	90	54.161	Amphiprion_ocellaris
ENSTRUG00000000023	-	79	61.098	ENSAPEG00000003646	srrt	90	54.161	Amphiprion_percula
ENSTRUG00000000023	-	91	77.179	ENSAPEG00000020016	-	90	78.205	Amphiprion_percula
ENSTRUG00000000023	-	79	61.098	ENSATEG00000014425	srrt	90	53.637	Anabas_testudineus
ENSTRUG00000000023	-	58	82.353	ENSATEG00000003652	-	93	82.828	Anabas_testudineus
ENSTRUG00000000023	-	52	60.135	ENSACAG00000001014	SRRT	90	51.189	Anolis_carolinensis
ENSTRUG00000000023	-	51	60.179	ENSANAG00000031718	SRRT	90	54.057	Aotus_nancymaae
ENSTRUG00000000023	-	91	75.476	ENSACLG00000009423	-	90	76.747	Astatotilapia_calliptera
ENSTRUG00000000023	-	51	61.327	ENSACLG00000013156	srrt	87	54.037	Astatotilapia_calliptera
ENSTRUG00000000023	-	51	60.137	ENSAMXG00000016671	srrt	88	52.882	Astyanax_mexicanus
ENSTRUG00000000023	-	51	59.955	ENSBTAG00000001134	SRRT	90	54.115	Bos_taurus
ENSTRUG00000000023	-	56	42.588	WBGene00017085	E01A2.2	70	42.588	Caenorhabditis_elegans
ENSTRUG00000000023	-	51	59.955	ENSCJAG00000014917	SRRT	90	53.933	Callithrix_jacchus
ENSTRUG00000000023	-	94	54.469	ENSCAFG00000023538	SRRT	90	54.115	Canis_familiaris
ENSTRUG00000000023	-	94	54.424	ENSCAFG00020013358	SRRT	95	53.157	Canis_lupus_dingo
ENSTRUG00000000023	-	51	59.732	ENSCHIG00000010495	SRRT	90	53.990	Capra_hircus
ENSTRUG00000000023	-	51	60.135	ENSTSYG00000036426	SRRT	94	52.978	Carlito_syrichta
ENSTRUG00000000023	-	51	60.412	ENSCAPG00000013586	SRRT	95	54.499	Cavia_aperea
ENSTRUG00000000023	-	51	59.821	ENSCPOG00000001739	SRRT	90	54.182	Cavia_porcellus
ENSTRUG00000000023	-	51	60.179	ENSCCAG00000015877	SRRT	90	54.182	Cebus_capucinus
ENSTRUG00000000023	-	51	60.179	ENSCATG00000036306	SRRT	92	53.580	Cercocebus_atys
ENSTRUG00000000023	-	94	53.293	ENSCLAG00000007568	SRRT	90	54.375	Chinchilla_lanigera
ENSTRUG00000000023	-	51	60.179	ENSCSAG00000017996	SRRT	90	54.239	Chlorocebus_sabaeus
ENSTRUG00000000023	-	55	57.500	ENSCHOG00000007815	SRRT	67	55.696	Choloepus_hoffmanni
ENSTRUG00000000023	-	68	58.257	ENSCPBG00000011553	SRRT	72	56.731	Chrysemys_picta_bellii
ENSTRUG00000000023	-	76	54.366	ENSCSAVG00000008394	-	86	54.070	Ciona_savignyi
ENSTRUG00000000023	-	51	60.135	ENSCANG00000034556	SRRT	90	54.193	Colobus_angolensis_palliatus
ENSTRUG00000000023	-	51	60.179	ENSCGRG00001001594	Srrt	90	54.637	Cricetulus_griseus_chok1gshd
ENSTRUG00000000023	-	94	48.375	ENSCGRG00000007292	Srrt	89	54.352	Cricetulus_griseus_crigri
ENSTRUG00000000023	-	50	57.907	ENSCSEG00000017878	srrt	89	50.000	Cynoglossus_semilaevis
ENSTRUG00000000023	-	80	80.214	ENSCSEG00000005233	-	90	70.968	Cynoglossus_semilaevis
ENSTRUG00000000023	-	93	54.421	ENSCVAG00000019848	srrt	90	55.013	Cyprinodon_variegatus
ENSTRUG00000000023	-	91	75.000	ENSCVAG00000017344	-	93	74.868	Cyprinodon_variegatus
ENSTRUG00000000023	-	51	62.329	ENSDARG00000017762	srrt	90	52.528	Danio_rerio
ENSTRUG00000000023	-	51	60.179	ENSDNOG00000003851	SRRT	90	53.990	Dasypus_novemcinctus
ENSTRUG00000000023	-	94	54.733	ENSDORG00000005584	Srrt	88	56.522	Dipodomys_ordii
ENSTRUG00000000023	-	92	45.229	FBgn0033062	Ars2	65	50.704	Drosophila_melanogaster
ENSTRUG00000000023	-	73	58.376	ENSETEG00000016175	SRRT	67	57.447	Echinops_telfairi
ENSTRUG00000000023	-	75	50.000	ENSEBUG00000008517	-	74	59.584	Eptatretus_burgeri
ENSTRUG00000000023	-	94	54.096	ENSEASG00005016956	SRRT	90	54.364	Equus_asinus_asinus
ENSTRUG00000000023	-	94	54.096	ENSECAG00000012292	SRRT	90	54.364	Equus_caballus
ENSTRUG00000000023	-	77	62.821	ENSEEUG00000009117	SRRT	68	54.516	Erinaceus_europaeus
ENSTRUG00000000023	-	89	64.115	ENSELUG00000021216	-	89	65.000	Esox_lucius
ENSTRUG00000000023	-	94	52.990	ENSFCAG00000006855	SRRT	90	54.115	Felis_catus
ENSTRUG00000000023	-	73	63.255	ENSFHEG00000002756	srrt	79	64.398	Fundulus_heteroclitus
ENSTRUG00000000023	-	52	73.182	ENSFHEG00000004105	-	91	72.483	Fundulus_heteroclitus
ENSTRUG00000000023	-	94	52.892	ENSGMOG00000018619	srrt	90	51.372	Gadus_morhua
ENSTRUG00000000023	-	94	73.419	ENSGAFG00000020383	-	90	72.836	Gambusia_affinis
ENSTRUG00000000023	-	51	62.156	ENSGAFG00000005423	srrt	90	53.540	Gambusia_affinis
ENSTRUG00000000023	-	94	54.177	ENSGACG00000020387	srrt	90	53.580	Gasterosteus_aculeatus
ENSTRUG00000000023	-	91	69.240	ENSGACG00000001100	-	90	70.750	Gasterosteus_aculeatus
ENSTRUG00000000023	-	51	60.179	ENSGGOG00000001508	SRRT	91	54.193	Gorilla_gorilla
ENSTRUG00000000023	-	51	61.327	ENSHBUG00000002942	srrt	87	53.913	Haplochromis_burtoni
ENSTRUG00000000023	-	94	53.846	ENSHGLG00000008344	Srrt	90	53.491	Heterocephalus_glaber_female
ENSTRUG00000000023	-	94	54.358	ENSHGLG00100018857	Srrt	89	55.292	Heterocephalus_glaber_male
ENSTRUG00000000023	-	96	53.938	ENSHCOG00000005403	srrt	90	53.711	Hippocampus_comes
ENSTRUG00000000023	-	91	68.667	ENSHCOG00000008904	-	90	68.800	Hippocampus_comes
ENSTRUG00000000023	-	51	60.135	ENSSTOG00000013776	SRRT	90	53.817	Ictidomys_tridecemlineatus
ENSTRUG00000000023	-	94	54.534	ENSJJAG00000010446	Srrt	89	56.156	Jaculus_jaculus
ENSTRUG00000000023	-	92	55.712	ENSKMAG00000013599	srrt	89	55.239	Kryptolebias_marmoratus
ENSTRUG00000000023	-	89	74.934	ENSKMAG00000008468	-	90	74.841	Kryptolebias_marmoratus
ENSTRUG00000000023	-	65	70.216	ENSLBEG00000028983	-	97	71.176	Labrus_bergylta
ENSTRUG00000000023	-	94	55.322	ENSLBEG00000016308	srrt	90	54.082	Labrus_bergylta
ENSTRUG00000000023	-	92	46.532	ENSLACG00000001089	SRRT	90	45.997	Latimeria_chalumnae
ENSTRUG00000000023	-	50	53.066	ENSLOCG00000013658	srrt	97	47.685	Lepisosteus_oculatus
ENSTRUG00000000023	-	94	55.164	ENSLAFG00000007725	SRRT	90	54.819	Loxodonta_africana
ENSTRUG00000000023	-	51	60.135	ENSMFAG00000033745	SRRT	94	53.580	Macaca_fascicularis
ENSTRUG00000000023	-	51	60.179	ENSMMUG00000021255	SRRT	90	54.239	Macaca_mulatta
ENSTRUG00000000023	-	51	60.179	ENSMNEG00000041864	SRRT	92	53.580	Macaca_nemestrina
ENSTRUG00000000023	-	51	60.135	ENSMLEG00000029479	SRRT	93	53.580	Mandrillus_leucophaeus
ENSTRUG00000000023	-	51	60.690	ENSMAMG00000014311	srrt	90	53.465	Mastacembelus_armatus
ENSTRUG00000000023	-	91	76.209	ENSMAMG00000010681	-	90	78.792	Mastacembelus_armatus
ENSTRUG00000000023	-	51	61.327	ENSMZEG00005016135	srrt	87	54.161	Maylandia_zebra
ENSTRUG00000000023	-	91	75.095	ENSMZEG00005028002	-	90	76.620	Maylandia_zebra
ENSTRUG00000000023	-	94	53.697	ENSMAUG00000011386	Srrt	90	54.774	Mesocricetus_auratus
ENSTRUG00000000023	-	51	60.179	ENSMICG00000009471	SRRT	92	53.704	Microcebus_murinus
ENSTRUG00000000023	-	94	54.005	ENSMOCG00000001971	Srrt	89	55.794	Microtus_ochrogaster
ENSTRUG00000000023	-	94	55.185	ENSMMOG00000016399	srrt	90	53.992	Mola_mola
ENSTRUG00000000023	-	81	74.709	ENSMMOG00000011137	-	85	75.325	Mola_mola
ENSTRUG00000000023	-	51	57.238	ENSMODG00000004862	SRRT	90	56.211	Monodelphis_domestica
ENSTRUG00000000023	-	66	55.203	ENSMALG00000005567	-	95	64.494	Monopterus_albus
ENSTRUG00000000023	-	82	50.616	ENSMALG00000018604	srrt	90	51.042	Monopterus_albus
ENSTRUG00000000023	-	94	54.645	MGP_CAROLIEiJ_G0027870	Srrt	95	56.977	Mus_caroli
ENSTRUG00000000023	-	94	54.645	ENSMUSG00000037364	Srrt	94	56.977	Mus_musculus
ENSTRUG00000000023	-	94	54.501	MGP_PahariEiJ_G0024456	Srrt	95	56.977	Mus_pahari
ENSTRUG00000000023	-	94	54.645	MGP_SPRETEiJ_G0028875	Srrt	95	56.977	Mus_spretus
ENSTRUG00000000023	-	94	53.524	ENSMPUG00000015839	SRRT	90	54.115	Mustela_putorius_furo
ENSTRUG00000000023	-	51	59.955	ENSMLUG00000009975	SRRT	90	54.340	Myotis_lucifugus
ENSTRUG00000000023	-	94	54.162	ENSNGAG00000023715	Srrt	97	55.664	Nannospalax_galili
ENSTRUG00000000023	-	93	51.207	ENSNLEG00000011987	SRRT	95	50.387	Nomascus_leucogenys
ENSTRUG00000000023	-	92	46.642	ENSMEUG00000011941	SRRT	90	44.823	Notamacropus_eugenii
ENSTRUG00000000023	-	56	61.254	ENSOPRG00000002502	-	59	61.254	Ochotona_princeps
ENSTRUG00000000023	-	51	60.641	ENSODEG00000016856	SRRT	90	54.626	Octodon_degus
ENSTRUG00000000023	-	51	61.327	ENSONIG00000004242	srrt	90	52.883	Oreochromis_niloticus
ENSTRUG00000000023	-	91	75.158	ENSONIG00000016080	-	90	76.679	Oreochromis_niloticus
ENSTRUG00000000023	-	93	54.655	ENSORLG00000008120	srrt	90	54.193	Oryzias_latipes
ENSTRUG00000000023	-	93	55.072	ENSORLG00020003058	srrt	90	53.625	Oryzias_latipes_hni
ENSTRUG00000000023	-	93	55.072	ENSORLG00015008062	srrt	90	53.625	Oryzias_latipes_hsok
ENSTRUG00000000023	-	96	77.764	ENSOMEG00000006963	-	90	76.882	Oryzias_melastigma
ENSTRUG00000000023	-	93	55.290	ENSOMEG00000003155	srrt	90	53.885	Oryzias_melastigma
ENSTRUG00000000023	-	51	60.179	ENSOGAG00000017242	SRRT	90	54.489	Otolemur_garnettii
ENSTRUG00000000023	-	51	59.685	ENSOARG00000015645	SRRT	90	53.942	Ovis_aries
ENSTRUG00000000023	-	51	60.135	ENSPPAG00000041090	SRRT	92	52.104	Pan_paniscus
ENSTRUG00000000023	-	94	52.885	ENSPPRG00000009557	SRRT	90	54.010	Panthera_pardus
ENSTRUG00000000023	-	94	53.110	ENSPTIG00000014355	SRRT	90	54.115	Panthera_tigris_altaica
ENSTRUG00000000023	-	51	60.135	ENSPTRG00000019511	SRRT	95	51.980	Pan_troglodytes
ENSTRUG00000000023	-	51	58.901	ENSPANG00000020763	SRRT	91	53.580	Papio_anubis
ENSTRUG00000000023	-	94	55.240	ENSPKIG00000005434	srrt	90	54.557	Paramormyrops_kingsleyae
ENSTRUG00000000023	-	92	54.982	ENSPKIG00000022212	-	91	53.701	Paramormyrops_kingsleyae
ENSTRUG00000000023	-	51	59.633	ENSPSIG00000016311	SRRT	90	52.284	Pelodiscus_sinensis
ENSTRUG00000000023	-	51	59.862	ENSPMGG00000002841	srrt	90	54.124	Periophthalmus_magnuspinnatus
ENSTRUG00000000023	-	51	60.641	ENSPEMG00000010834	Srrt	90	54.707	Peromyscus_maniculatus_bairdii
ENSTRUG00000000023	-	94	49.817	ENSPMAG00000009614	-	90	49.746	Petromyzon_marinus
ENSTRUG00000000023	-	52	58.134	ENSPCIG00000000816	SRRT	90	53.051	Phascolarctos_cinereus
ENSTRUG00000000023	-	51	62.615	ENSPFOG00000005704	srrt	89	54.156	Poecilia_formosa
ENSTRUG00000000023	-	94	73.028	ENSPFOG00000016554	-	90	73.670	Poecilia_formosa
ENSTRUG00000000023	-	94	74.160	ENSPLAG00000004526	-	90	73.740	Poecilia_latipinna
ENSTRUG00000000023	-	94	73.028	ENSPMEG00000001520	-	93	73.572	Poecilia_mexicana
ENSTRUG00000000023	-	76	62.187	ENSPMEG00000001182	srrt	89	54.224	Poecilia_mexicana
ENSTRUG00000000023	-	93	54.054	ENSPREG00000022308	srrt	89	54.534	Poecilia_reticulata
ENSTRUG00000000023	-	51	58.022	ENSPCAG00000001621	SRRT	90	51.806	Procavia_capensis
ENSTRUG00000000023	-	51	60.179	ENSPCOG00000025751	SRRT	90	54.364	Propithecus_coquereli
ENSTRUG00000000023	-	59	59.722	ENSPVAG00000000834	SRRT	97	47.235	Pteropus_vampyrus
ENSTRUG00000000023	-	51	61.327	ENSPNYG00000018710	srrt	90	54.037	Pundamilia_nyererei
ENSTRUG00000000023	-	72	61.635	ENSPNAG00000010629	srrt	88	40.245	Pygocentrus_nattereri
ENSTRUG00000000023	-	51	49.774	ENSRNOG00000048277	AABR07035787.1	92	49.024	Rattus_norvegicus
ENSTRUG00000000023	-	51	60.179	ENSRBIG00000035718	SRRT	92	53.580	Rhinopithecus_bieti
ENSTRUG00000000023	-	51	60.179	ENSRROG00000030622	SRRT	93	53.580	Rhinopithecus_roxellana
ENSTRUG00000000023	-	51	60.179	ENSSBOG00000033570	SRRT	91	54.135	Saimiri_boliviensis_boliviensis
ENSTRUG00000000023	-	53	57.569	ENSSHAG00000007349	-	97	50.894	Sarcophilus_harrisii
ENSTRUG00000000023	-	92	54.523	ENSSFOG00015017293	srrt	90	55.638	Scleropages_formosus
ENSTRUG00000000023	-	93	55.584	ENSSMAG00000015342	srrt	90	53.865	Scophthalmus_maximus
ENSTRUG00000000023	-	51	78.719	ENSSMAG00000018195	-	90	69.361	Scophthalmus_maximus
ENSTRUG00000000023	-	52	66.964	ENSSDUG00000002051	-	90	67.028	Seriola_dumerili
ENSTRUG00000000023	-	51	62.329	ENSSDUG00000012049	srrt	90	54.375	Seriola_dumerili
ENSTRUG00000000023	-	78	62.818	ENSSLDG00000017477	srrt	79	62.818	Seriola_lalandi_dorsalis
ENSTRUG00000000023	-	51	61.312	ENSSPAG00000005665	srrt	89	54.647	Stegastes_partitus
ENSTRUG00000000023	-	87	77.570	ENSSPAG00000018943	-	93	77.971	Stegastes_partitus
ENSTRUG00000000023	-	71	50.399	ENSTNIG00000011779	srrt	96	52.464	Tetraodon_nigroviridis
ENSTRUG00000000023	-	91	78.061	ENSTNIG00000003111	-	90	80.102	Tetraodon_nigroviridis
ENSTRUG00000000023	-	51	60.179	ENSTTRG00000011104	SRRT	90	54.239	Tursiops_truncatus
ENSTRUG00000000023	-	93	52.941	ENSUAMG00000027997	SRRT	93	54.239	Ursus_americanus
ENSTRUG00000000023	-	94	52.990	ENSUMAG00000011295	SRRT	90	54.239	Ursus_maritimus
ENSTRUG00000000023	-	94	54.469	ENSVVUG00000023572	SRRT	90	54.115	Vulpes_vulpes
ENSTRUG00000000023	-	69	56.916	ENSXETG00000025124	srrt	90	45.173	Xenopus_tropicalis
ENSTRUG00000000023	-	52	63.109	ENSXCOG00000013105	-	88	63.341	Xiphophorus_couchianus
ENSTRUG00000000023	-	96	74.023	ENSXMAG00000002090	-	90	72.606	Xiphophorus_maculatus
ENSTRUG00000000023	-	79	63.983	ENSXMAG00000007627	srrt	82	62.955	Xiphophorus_maculatus