EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000000049 (Gene tree)
Gene ID: 101065614
Gene Symbol: rnaseh2a
Alias: zgc:56307
Full Name: ribonuclease H2 subunit A
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2842 bases
Position: chrHE591879.1:117930-120771
Accession: 101065614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000049182	RNase_HII	PF01351.18	1.7e-50	1	1
ENSTRUP00000000114	RNase_HII	PF01351.18	3.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055666	-	1559	XM_003976050	ENSTRUP00000049182	310 (aa)	XP_003976099	UPI0000660774
ENSTRUT00000000114	-	756	-	ENSTRUP00000000114	251 (aa)	-	H2RJ01

Gene Model

Click here to download ENSTRUG00000000049's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000000049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000000049	rnaseh2a	100	57.742	ENSG00000104889	RNASEH2A	99	65.217	Homo_sapiens
ENSTRUG00000000049	rnaseh2a	100	85.161	ENSAPOG00000004101	rnaseh2a	100	85.161	Acanthochromis_polyacanthus
ENSTRUG00000000049	rnaseh2a	100	58.710	ENSAMEG00000012323	RNASEH2A	100	58.387	Ailuropoda_melanoleuca
ENSTRUG00000000049	rnaseh2a	82	87.059	ENSACIG00000002658	rnaseh2a	100	87.059	Amphilophus_citrinellus
ENSTRUG00000000049	rnaseh2a	100	84.839	ENSAOCG00000009217	rnaseh2a	100	84.839	Amphiprion_ocellaris
ENSTRUG00000000049	rnaseh2a	100	85.161	ENSAPEG00000022937	rnaseh2a	100	85.161	Amphiprion_percula
ENSTRUG00000000049	rnaseh2a	100	81.935	ENSATEG00000000908	rnaseh2a	100	81.935	Anabas_testudineus
ENSTRUG00000000049	rnaseh2a	100	65.161	ENSACAG00000003338	RNASEH2A	100	63.871	Anolis_carolinensis
ENSTRUG00000000049	rnaseh2a	100	42.089	ENSANAG00000037932	RNASEH2A	100	41.905	Aotus_nancymaae
ENSTRUG00000000049	rnaseh2a	100	82.581	ENSACLG00000009169	rnaseh2a	100	82.581	Astatotilapia_calliptera
ENSTRUG00000000049	rnaseh2a	100	71.739	ENSAMXG00000000436	rnaseh2a	100	71.739	Astyanax_mexicanus
ENSTRUG00000000049	rnaseh2a	100	59.032	ENSBTAG00000009661	RNASEH2A	100	58.387	Bos_taurus
ENSTRUG00000000049	rnaseh2a	78	53.659	WBGene00004383	rnh-2	78	54.978	Caenorhabditis_elegans
ENSTRUG00000000049	rnaseh2a	100	57.419	ENSCJAG00000004873	RNASEH2A	100	56.452	Callithrix_jacchus
ENSTRUG00000000049	rnaseh2a	100	57.235	ENSCAFG00000017159	RNASEH2A	100	57.419	Canis_familiaris
ENSTRUG00000000049	rnaseh2a	100	57.235	ENSCAFG00020005190	RNASEH2A	60	57.419	Canis_lupus_dingo
ENSTRUG00000000049	rnaseh2a	100	58.521	ENSCHIG00000014460	RNASEH2A	100	58.521	Capra_hircus
ENSTRUG00000000049	rnaseh2a	100	59.486	ENSTSYG00000025418	RNASEH2A	100	59.677	Carlito_syrichta
ENSTRUG00000000049	rnaseh2a	66	54.255	ENSCAPG00000003411	RNASEH2A	99	54.255	Cavia_aperea
ENSTRUG00000000049	rnaseh2a	100	58.065	ENSCPOG00000038877	RNASEH2A	100	57.742	Cavia_porcellus
ENSTRUG00000000049	rnaseh2a	100	58.387	ENSCCAG00000030453	RNASEH2A	100	57.419	Cebus_capucinus
ENSTRUG00000000049	rnaseh2a	100	58.521	ENSCATG00000029609	RNASEH2A	100	58.065	Cercocebus_atys
ENSTRUG00000000049	rnaseh2a	100	56.774	ENSCLAG00000014930	RNASEH2A	100	56.774	Chinchilla_lanigera
ENSTRUG00000000049	rnaseh2a	100	58.521	ENSCSAG00000006567	RNASEH2A	100	58.065	Chlorocebus_sabaeus
ENSTRUG00000000049	rnaseh2a	100	64.194	ENSCPBG00000023909	RNASEH2A	100	63.871	Chrysemys_picta_bellii
ENSTRUG00000000049	rnaseh2a	100	51.613	ENSCING00000006190	-	99	52.117	Ciona_intestinalis
ENSTRUG00000000049	rnaseh2a	100	50.968	ENSCSAVG00000010904	-	100	50.323	Ciona_savignyi
ENSTRUG00000000049	rnaseh2a	100	58.387	ENSCANG00000027433	RNASEH2A	100	58.710	Colobus_angolensis_palliatus
ENSTRUG00000000049	rnaseh2a	100	57.878	ENSCGRG00001005021	Rnaseh2a	100	57.188	Cricetulus_griseus_chok1gshd
ENSTRUG00000000049	rnaseh2a	100	57.878	ENSCGRG00000016602	Rnaseh2a	93	64.706	Cricetulus_griseus_crigri
ENSTRUG00000000049	rnaseh2a	100	80.968	ENSCSEG00000009842	rnaseh2a	100	80.968	Cynoglossus_semilaevis
ENSTRUG00000000049	rnaseh2a	99	71.104	ENSCVAG00000021203	rnaseh2a	99	71.104	Cyprinodon_variegatus
ENSTRUG00000000049	rnaseh2a	100	80.323	ENSDARG00000018891	rnaseh2a	100	83.099	Danio_rerio
ENSTRUG00000000049	rnaseh2a	86	55.639	ENSDNOG00000036532	RNASEH2A	100	54.887	Dasypus_novemcinctus
ENSTRUG00000000049	rnaseh2a	100	58.387	ENSDORG00000009008	Rnaseh2a	100	58.387	Dipodomys_ordii
ENSTRUG00000000049	rnaseh2a	98	48.077	FBgn0031252	CG13690	87	47.756	Drosophila_melanogaster
ENSTRUG00000000049	rnaseh2a	69	54.930	ENSETEG00000001956	-	100	54.930	Echinops_telfairi
ENSTRUG00000000049	rnaseh2a	95	55.442	ENSEBUG00000003380	rnaseh2a	89	55.442	Eptatretus_burgeri
ENSTRUG00000000049	rnaseh2a	89	59.514	ENSEASG00005004118	RNASEH2A	92	64.706	Equus_asinus_asinus
ENSTRUG00000000049	rnaseh2a	100	58.387	ENSECAG00000007013	RNASEH2A	100	57.742	Equus_caballus
ENSTRUG00000000049	rnaseh2a	100	54.839	ENSEEUG00000008222	RNASEH2A	100	54.194	Erinaceus_europaeus
ENSTRUG00000000049	rnaseh2a	99	77.850	ENSELUG00000023079	rnaseh2a	96	74.603	Esox_lucius
ENSTRUG00000000049	rnaseh2a	100	58.199	ENSFCAG00000000474	RNASEH2A	100	58.387	Felis_catus
ENSTRUG00000000049	rnaseh2a	100	57.097	ENSFDAG00000003595	RNASEH2A	96	64.400	Fukomys_damarensis
ENSTRUG00000000049	rnaseh2a	100	80.968	ENSFHEG00000007682	rnaseh2a	100	80.968	Fundulus_heteroclitus
ENSTRUG00000000049	rnaseh2a	100	76.774	ENSGMOG00000005650	rnaseh2a	100	76.774	Gadus_morhua
ENSTRUG00000000049	rnaseh2a	100	59.164	ENSGALG00000052002	RNASEH2A	73	58.521	Gallus_gallus
ENSTRUG00000000049	rnaseh2a	100	80.323	ENSGAFG00000009624	rnaseh2a	100	80.323	Gambusia_affinis
ENSTRUG00000000049	rnaseh2a	100	82.903	ENSGACG00000016019	rnaseh2a	100	82.903	Gasterosteus_aculeatus
ENSTRUG00000000049	rnaseh2a	100	63.548	ENSGAGG00000013859	RNASEH2A	100	62.903	Gopherus_agassizii
ENSTRUG00000000049	rnaseh2a	100	58.521	ENSGGOG00000005846	RNASEH2A	100	58.065	Gorilla_gorilla
ENSTRUG00000000049	rnaseh2a	94	83.793	ENSHBUG00000005267	rnaseh2a	99	83.793	Haplochromis_burtoni
ENSTRUG00000000049	rnaseh2a	100	57.097	ENSHGLG00000018801	RNASEH2A	100	57.097	Heterocephalus_glaber_female
ENSTRUG00000000049	rnaseh2a	100	57.419	ENSHGLG00100015773	RNASEH2A	100	57.419	Heterocephalus_glaber_male
ENSTRUG00000000049	rnaseh2a	100	80.323	ENSHCOG00000016593	rnaseh2a	100	80.323	Hippocampus_comes
ENSTRUG00000000049	rnaseh2a	100	79.032	ENSIPUG00000024299	rnaseh2a	100	79.032	Ictalurus_punctatus
ENSTRUG00000000049	rnaseh2a	100	57.097	ENSSTOG00000006224	RNASEH2A	99	64.706	Ictidomys_tridecemlineatus
ENSTRUG00000000049	rnaseh2a	100	59.355	ENSJJAG00000017547	Rnaseh2a	100	59.355	Jaculus_jaculus
ENSTRUG00000000049	rnaseh2a	100	80.645	ENSKMAG00000019829	rnaseh2a	100	80.645	Kryptolebias_marmoratus
ENSTRUG00000000049	rnaseh2a	100	83.226	ENSLBEG00000020494	rnaseh2a	100	83.226	Labrus_bergylta
ENSTRUG00000000049	rnaseh2a	82	64.706	ENSLACG00000007789	RNASEH2A	99	64.706	Latimeria_chalumnae
ENSTRUG00000000049	rnaseh2a	100	72.903	ENSLOCG00000007890	rnaseh2a	99	72.903	Lepisosteus_oculatus
ENSTRUG00000000049	rnaseh2a	100	57.556	ENSLAFG00000015571	RNASEH2A	100	57.419	Loxodonta_africana
ENSTRUG00000000049	rnaseh2a	100	58.521	ENSMFAG00000002011	RNASEH2A	100	58.065	Macaca_fascicularis
ENSTRUG00000000049	rnaseh2a	100	58.199	ENSMMUG00000005690	RNASEH2A	100	57.742	Macaca_mulatta
ENSTRUG00000000049	rnaseh2a	100	58.199	ENSMNEG00000033054	RNASEH2A	100	57.742	Macaca_nemestrina
ENSTRUG00000000049	rnaseh2a	100	58.199	ENSMLEG00000043654	RNASEH2A	100	57.742	Mandrillus_leucophaeus
ENSTRUG00000000049	rnaseh2a	100	80.645	ENSMAMG00000003062	rnaseh2a	99	82.807	Mastacembelus_armatus
ENSTRUG00000000049	rnaseh2a	100	81.935	ENSMZEG00005023857	rnaseh2a	100	81.935	Maylandia_zebra
ENSTRUG00000000049	rnaseh2a	55	53.757	ENSMAUG00000021740	-	100	52.000	Mesocricetus_auratus
ENSTRUG00000000049	rnaseh2a	100	57.419	ENSMICG00000016430	RNASEH2A	100	57.419	Microcebus_murinus
ENSTRUG00000000049	rnaseh2a	100	58.199	ENSMOCG00000017408	Rnaseh2a	100	58.199	Microtus_ochrogaster
ENSTRUG00000000049	rnaseh2a	82	86.275	ENSMMOG00000008447	rnaseh2a	100	86.275	Mola_mola
ENSTRUG00000000049	rnaseh2a	100	64.423	ENSMODG00000006997	RNASEH2A	100	64.423	Monodelphis_domestica
ENSTRUG00000000049	rnaseh2a	100	81.935	ENSMALG00000021607	rnaseh2a	100	81.935	Monopterus_albus
ENSTRUG00000000049	rnaseh2a	100	41.720	MGP_CAROLIEiJ_G0031319	-	100	64.815	Mus_caroli
ENSTRUG00000000049	rnaseh2a	100	59.164	ENSMUSG00000052926	Rnaseh2a	100	64.815	Mus_musculus
ENSTRUG00000000049	rnaseh2a	100	58.521	MGP_PahariEiJ_G0022924	Rnaseh2a	100	64.815	Mus_pahari
ENSTRUG00000000049	rnaseh2a	100	58.842	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	64.815	Mus_spretus
ENSTRUG00000000049	rnaseh2a	100	58.710	ENSMPUG00000004586	RNASEH2A	100	58.710	Mustela_putorius_furo
ENSTRUG00000000049	rnaseh2a	100	58.065	ENSMLUG00000012723	RNASEH2A	100	58.065	Myotis_lucifugus
ENSTRUG00000000049	rnaseh2a	100	57.419	ENSNGAG00000017988	Rnaseh2a	100	57.419	Nannospalax_galili
ENSTRUG00000000049	rnaseh2a	100	82.903	ENSNBRG00000018731	rnaseh2a	100	82.903	Neolamprologus_brichardi
ENSTRUG00000000049	rnaseh2a	100	58.842	ENSNLEG00000012806	RNASEH2A	100	58.387	Nomascus_leucogenys
ENSTRUG00000000049	rnaseh2a	69	71.362	ENSMEUG00000006001	RNASEH2A	100	71.362	Notamacropus_eugenii
ENSTRUG00000000049	rnaseh2a	100	47.756	ENSOPRG00000004811	RNASEH2A	100	47.436	Ochotona_princeps
ENSTRUG00000000049	rnaseh2a	100	58.387	ENSODEG00000009772	RNASEH2A	100	58.387	Octodon_degus
ENSTRUG00000000049	rnaseh2a	100	81.935	ENSONIG00000018033	rnaseh2a	99	81.935	Oreochromis_niloticus
ENSTRUG00000000049	rnaseh2a	100	58.387	ENSOANG00000009079	RNASEH2A	100	58.387	Ornithorhynchus_anatinus
ENSTRUG00000000049	rnaseh2a	100	81.935	ENSORLG00000004042	rnaseh2a	100	81.935	Oryzias_latipes
ENSTRUG00000000049	rnaseh2a	100	81.613	ENSORLG00020009483	rnaseh2a	100	81.613	Oryzias_latipes_hni
ENSTRUG00000000049	rnaseh2a	100	81.935	ENSORLG00015007548	rnaseh2a	100	81.935	Oryzias_latipes_hsok
ENSTRUG00000000049	rnaseh2a	100	80.645	ENSOMEG00000016454	rnaseh2a	100	80.645	Oryzias_melastigma
ENSTRUG00000000049	rnaseh2a	100	56.774	ENSOGAG00000012214	RNASEH2A	100	56.452	Otolemur_garnettii
ENSTRUG00000000049	rnaseh2a	100	58.521	ENSOARG00000010721	RNASEH2A	100	58.065	Ovis_aries
ENSTRUG00000000049	rnaseh2a	100	58.521	ENSPPAG00000028092	RNASEH2A	100	58.065	Pan_paniscus
ENSTRUG00000000049	rnaseh2a	100	58.199	ENSPPRG00000010585	RNASEH2A	100	58.387	Panthera_pardus
ENSTRUG00000000049	rnaseh2a	100	57.878	ENSPTIG00000013366	RNASEH2A	100	58.065	Panthera_tigris_altaica
ENSTRUG00000000049	rnaseh2a	100	58.199	ENSPTRG00000010542	RNASEH2A	100	57.692	Pan_troglodytes
ENSTRUG00000000049	rnaseh2a	100	58.521	ENSPANG00000034495	RNASEH2A	100	58.065	Papio_anubis
ENSTRUG00000000049	rnaseh2a	100	76.452	ENSPKIG00000009756	rnaseh2a	100	76.452	Paramormyrops_kingsleyae
ENSTRUG00000000049	rnaseh2a	68	63.402	ENSPSIG00000012039	RNASEH2A	100	63.902	Pelodiscus_sinensis
ENSTRUG00000000049	rnaseh2a	89	74.597	ENSPMGG00000023392	rnaseh2a	100	81.176	Periophthalmus_magnuspinnatus
ENSTRUG00000000049	rnaseh2a	100	57.878	ENSPEMG00000018009	Rnaseh2a	100	57.878	Peromyscus_maniculatus_bairdii
ENSTRUG00000000049	rnaseh2a	98	59.871	ENSPMAG00000009060	rnaseh2a	98	61.165	Petromyzon_marinus
ENSTRUG00000000049	rnaseh2a	100	63.987	ENSPCIG00000014119	RNASEH2A	100	63.987	Phascolarctos_cinereus
ENSTRUG00000000049	rnaseh2a	100	81.290	ENSPFOG00000012627	rnaseh2a	100	78.846	Poecilia_formosa
ENSTRUG00000000049	rnaseh2a	68	77.725	ENSPLAG00000018723	-	90	77.725	Poecilia_latipinna
ENSTRUG00000000049	rnaseh2a	82	83.922	ENSPLAG00000015901	rnaseh2a	100	83.922	Poecilia_latipinna
ENSTRUG00000000049	rnaseh2a	82	84.314	ENSPMEG00000000647	rnaseh2a	100	84.314	Poecilia_mexicana
ENSTRUG00000000049	rnaseh2a	68	78.199	ENSPMEG00000009032	-	93	78.199	Poecilia_mexicana
ENSTRUG00000000049	rnaseh2a	100	78.065	ENSPREG00000015015	rnaseh2a	100	77.742	Poecilia_reticulata
ENSTRUG00000000049	rnaseh2a	100	58.013	ENSPPYG00000009608	RNASEH2A	100	57.878	Pongo_abelii
ENSTRUG00000000049	rnaseh2a	100	57.235	ENSPCAG00000015319	RNASEH2A	100	56.774	Procavia_capensis
ENSTRUG00000000049	rnaseh2a	100	56.452	ENSPCOG00000003686	RNASEH2A	100	56.452	Propithecus_coquereli
ENSTRUG00000000049	rnaseh2a	100	46.452	ENSPVAG00000014703	RNASEH2A	98	46.689	Pteropus_vampyrus
ENSTRUG00000000049	rnaseh2a	100	76.923	ENSPNYG00000023986	rnaseh2a	100	76.923	Pundamilia_nyererei
ENSTRUG00000000049	rnaseh2a	100	79.032	ENSPNAG00000021017	rnaseh2a	100	79.032	Pygocentrus_nattereri
ENSTRUG00000000049	rnaseh2a	100	58.199	ENSRNOG00000003504	Rnaseh2a	100	58.199	Rattus_norvegicus
ENSTRUG00000000049	rnaseh2a	100	58.842	ENSRBIG00000023554	RNASEH2A	100	58.387	Rhinopithecus_bieti
ENSTRUG00000000049	rnaseh2a	100	58.842	ENSRROG00000043799	RNASEH2A	100	58.387	Rhinopithecus_roxellana
ENSTRUG00000000049	rnaseh2a	80	41.026	YNL072W	RNH201	76	42.259	Saccharomyces_cerevisiae
ENSTRUG00000000049	rnaseh2a	100	58.065	ENSSBOG00000033164	RNASEH2A	100	57.097	Saimiri_boliviensis_boliviensis
ENSTRUG00000000049	rnaseh2a	100	62.620	ENSSHAG00000015552	RNASEH2A	100	62.620	Sarcophilus_harrisii
ENSTRUG00000000049	rnaseh2a	100	75.806	ENSSFOG00015009692	rnaseh2a	100	75.806	Scleropages_formosus
ENSTRUG00000000049	rnaseh2a	100	80.968	ENSSMAG00000013986	rnaseh2a	98	82.986	Scophthalmus_maximus
ENSTRUG00000000049	rnaseh2a	94	83.849	ENSSDUG00000005280	rnaseh2a	99	83.849	Seriola_dumerili
ENSTRUG00000000049	rnaseh2a	100	82.903	ENSSLDG00000023766	rnaseh2a	100	82.903	Seriola_lalandi_dorsalis
ENSTRUG00000000049	rnaseh2a	100	82.903	ENSSPAG00000012769	rnaseh2a	100	82.903	Stegastes_partitus
ENSTRUG00000000049	rnaseh2a	100	57.097	ENSSSCG00000013737	RNASEH2A	100	56.774	Sus_scrofa
ENSTRUG00000000049	rnaseh2a	100	86.129	ENSTNIG00000004533	rnaseh2a	99	86.129	Tetraodon_nigroviridis
ENSTRUG00000000049	rnaseh2a	69	65.728	ENSTTRG00000003592	RNASEH2A	100	65.728	Tursiops_truncatus
ENSTRUG00000000049	rnaseh2a	100	58.710	ENSUAMG00000019593	RNASEH2A	99	61.429	Ursus_americanus
ENSTRUG00000000049	rnaseh2a	83	59.052	ENSUMAG00000006254	-	73	65.948	Ursus_maritimus
ENSTRUG00000000049	rnaseh2a	99	67.752	ENSXETG00000004762	rnaseh2a	98	67.752	Xenopus_tropicalis
ENSTRUG00000000049	rnaseh2a	100	80.000	ENSXCOG00000013485	rnaseh2a	99	82.857	Xiphophorus_couchianus
ENSTRUG00000000049	rnaseh2a	100	80.323	ENSXMAG00000006953	rnaseh2a	100	80.323	Xiphophorus_maculatus