EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000000405 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
25405 bases
Position
chr15:7274554-7299958
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000000950tRNA_anti-codonPF01336.251.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000000953RPA1 (1 of many)-2025022-ENSTRUP00000000950715 (aa)-H2RLD7
ENSTRUT00000000958RPA1 (1 of many)-2015112-ENSTRUP00000000955745 (aa)-H2RLE2
Gene Model
Click here to download ENSTRUG00000000405's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000000405's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000000405RPA18268.636ENSTRUG00000003616rpa19961.133
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000000405RPA18268.578ENSAPOG00000011658rpa19962.151Acanthochromis_polyacanthus
ENSTRUG00000000405RPA19968.414ENSAPOG00000019409RPA19968.370Acanthochromis_polyacanthus
ENSTRUG00000000405RPA18259.504ENSAMEG00000007706RPA18764.103Ailuropoda_melanoleuca
ENSTRUG00000000405RPA19679.648ENSACIG00000012881RPA19981.489Amphilophus_citrinellus
ENSTRUG00000000405RPA18359.404ENSACIG00000007277rpa19959.579Amphilophus_citrinellus
ENSTRUG00000000405RPA19360.861ENSAOCG00000023376rpa19368.925Amphiprion_ocellaris
ENSTRUG00000000405RPA19967.181ENSAOCG00000009003RPA19967.742Amphiprion_ocellaris
ENSTRUG00000000405RPA19968.163ENSAPEG00000019132RPA19967.818Amphiprion_percula
ENSTRUG00000000405RPA18069.037ENSAPEG00000008634rpa19369.159Amphiprion_percula
ENSTRUG00000000405RPA19969.306ENSATEG00000006443RPA19968.750Anabas_testudineus
ENSTRUG00000000405RPA17369.248ENSATEG00000022024rpa19169.860Anabas_testudineus
ENSTRUG00000000405RPA17852.444ENSAPLG00000012442RPA19953.479Anas_platyrhynchos
ENSTRUG00000000405RPA18059.389ENSACAG00000014490RPA19559.081Anolis_carolinensis
ENSTRUG00000000405RPA18362.557ENSANAG00000023456RPA19863.084Aotus_nancymaae
ENSTRUG00000000405RPA19967.041ENSACLG00000005223RPA19966.436Astatotilapia_calliptera
ENSTRUG00000000405RPA17271.330ENSACLG00000006640rpa19171.729Astatotilapia_calliptera
ENSTRUG00000000405RPA17769.124ENSAMXG00000008418rpa19469.953Astyanax_mexicanus
ENSTRUG00000000405RPA18658.197ENSBTAG00000009711RPA19958.197Bos_taurus
ENSTRUG00000000405RPA17762.557ENSCJAG00000001848RPA19956.886Callithrix_jacchus
ENSTRUG00000000405RPA18758.384ENSCAFG00000019249RPA19958.586Canis_familiaris
ENSTRUG00000000405RPA18758.384ENSCAFG00020009847RPA19958.586Canis_lupus_dingo
ENSTRUG00000000405RPA18160.086ENSCHIG00000026308RPA19954.876Capra_hircus
ENSTRUG00000000405RPA17962.132ENSTSYG00000003482-9163.084Carlito_syrichta
ENSTRUG00000000405RPA19556.634ENSCPOG00000000035RPA19955.299Cavia_porcellus
ENSTRUG00000000405RPA17753.425ENSCCAG00000010981RPA19848.703Cebus_capucinus
ENSTRUG00000000405RPA19653.425ENSCLAG00000015045-9953.229Chinchilla_lanigera
ENSTRUG00000000405RPA19856.322ENSCLAG00000005185-9956.084Chinchilla_lanigera
ENSTRUG00000000405RPA17753.196ENSCSAG00000013833RPA19849.219Chlorocebus_sabaeus
ENSTRUG00000000405RPA17861.438ENSCHOG00000013540-9064.019Choloepus_hoffmanni
ENSTRUG00000000405RPA16063.510ENSCHOG00000009454-9763.785Choloepus_hoffmanni
ENSTRUG00000000405RPA19757.418ENSCPBG00000020377RPA19964.203Chrysemys_picta_bellii
ENSTRUG00000000405RPA19948.533ENSCING00000023482-9149.306Ciona_intestinalis
ENSTRUG00000000405RPA17562.557ENSCANG00000030911RPA19363.084Colobus_angolensis_palliatus
ENSTRUG00000000405RPA17762.442ENSCGRG00001008197Rpa18862.763Cricetulus_griseus_chok1gshd
ENSTRUG00000000405RPA16062.442ENSCGRG00000000582Rpa18462.763Cricetulus_griseus_crigri
ENSTRUG00000000405RPA19958.766ENSCSEG00000012726RPA19859.641Cynoglossus_semilaevis
ENSTRUG00000000405RPA17966.743ENSCSEG00000013066rpa19167.371Cynoglossus_semilaevis
ENSTRUG00000000405RPA17769.266ENSCVAG00000019431rpa19369.697Cyprinodon_variegatus
ENSTRUG00000000405RPA19766.331ENSCVAG00000013446-9665.819Cyprinodon_variegatus
ENSTRUG00000000405RPA18769.248ENSDARG00000003938rpa19969.860Danio_rerio
ENSTRUG00000000405RPA18457.809ENSDNOG00000017218RPA18862.818Dasypus_novemcinctus
ENSTRUG00000000405RPA19458.669ENSDORG00000006199Rpa19959.146Dipodomys_ordii
ENSTRUG00000000405RPA18343.497FBgn0010173RpA-709844.136Drosophila_melanogaster
ENSTRUG00000000405RPA17762.766ENSETEG00000017608RPA18262.766Echinops_telfairi
ENSTRUG00000000405RPA18160.349ENSEASG00005009372RPA19862.850Equus_asinus_asinus
ENSTRUG00000000405RPA18458.613ENSECAG00000023886RPA19062.617Equus_caballus
ENSTRUG00000000405RPA15863.133ENSEEUG00000002186-6763.133Erinaceus_europaeus
ENSTRUG00000000405RPA18868.539ENSELUG00000021071rpa19969.393Esox_lucius
ENSTRUG00000000405RPA15872.837ENSELUG00000006136RPA19272.837Esox_lucius
ENSTRUG00000000405RPA17963.014ENSFCAG00000006306RPA19063.934Felis_catus
ENSTRUG00000000405RPA19158.678ENSFALG00000006575RPA19962.558Ficedula_albicollis
ENSTRUG00000000405RPA19755.086ENSFDAG00000007720RPA19955.556Fukomys_damarensis
ENSTRUG00000000405RPA19069.425ENSFHEG00000003580rpa19969.393Fundulus_heteroclitus
ENSTRUG00000000405RPA18463.866ENSGMOG00000010382rpa19867.523Gadus_morhua
ENSTRUG00000000405RPA18861.707ENSGALG00000003072RPA19955.747Gallus_gallus
ENSTRUG00000000405RPA19068.276ENSGAFG00000012916rpa19968.458Gambusia_affinis
ENSTRUG00000000405RPA19964.895ENSGAFG00000020953RPA19966.017Gambusia_affinis
ENSTRUG00000000405RPA18668.793ENSGACG00000010856rpa19969.159Gasterosteus_aculeatus
ENSTRUG00000000405RPA19757.225ENSGAGG00000013611RPA19956.597Gopherus_agassizii
ENSTRUG00000000405RPA18061.002ENSGGOG00000014186RPA19463.318Gorilla_gorilla
ENSTRUG00000000405RPA17371.655ENSHBUG00000009348RPA19072.326Haplochromis_burtoni
ENSTRUG00000000405RPA18671.101ENSHBUG00000017773rpa19971.495Haplochromis_burtoni
ENSTRUG00000000405RPA17762.989ENSHGLG00000008846RPA19955.832Heterocephalus_glaber_female
ENSTRUG00000000405RPA17762.989ENSHGLG00100017755-9955.832Heterocephalus_glaber_male
ENSTRUG00000000405RPA19254.620ENSHGLG00100000799-9851.823Heterocephalus_glaber_male
ENSTRUG00000000405RPA18456.281ENSHGLG00100002005-9556.522Heterocephalus_glaber_male
ENSTRUG00000000405RPA18254.953ENSHCOG00000000351RPA19854.953Hippocampus_comes
ENSTRUG00000000405RPA19163.739ENSHCOG00000001401rpa19957.280Hippocampus_comes
ENSTRUG00000000405RPA18269.124ENSIPUG00000004400rpa19569.484Ictalurus_punctatus
ENSTRUG00000000405RPA18060.398ENSSTOG00000022475RPA19457.588Ictidomys_tridecemlineatus
ENSTRUG00000000405RPA17562.989ENSJJAG00000000876Rpa19756.117Jaculus_jaculus
ENSTRUG00000000405RPA19975.734ENSKMAG00000000234RPA19975.538Kryptolebias_marmoratus
ENSTRUG00000000405RPA17769.266ENSKMAG00000005605rpa19269.535Kryptolebias_marmoratus
ENSTRUG00000000405RPA18866.667ENSLBEG00000021604rpa19968.065Labrus_bergylta
ENSTRUG00000000405RPA19968.785ENSLBEG00000002281RPA19871.217Labrus_bergylta
ENSTRUG00000000405RPA16854.637ENSLACG00000007210RPA18759.353Latimeria_chalumnae
ENSTRUG00000000405RPA18960.588ENSLOCG00000006397rpa19068.852Lepisosteus_oculatus
ENSTRUG00000000405RPA19748.844ENSLAFG00000015354RPA19658.097Loxodonta_africana
ENSTRUG00000000405RPA16262.791ENSMFAG00000036138-9856.220Macaca_fascicularis
ENSTRUG00000000405RPA17562.557ENSMMUG00000011604-9757.227Macaca_mulatta
ENSTRUG00000000405RPA19953.816ENSMMUG00000002442-9853.816Macaca_mulatta
ENSTRUG00000000405RPA17158.636ENSMNEG00000029837-9159.070Macaca_nemestrina
ENSTRUG00000000405RPA17361.872ENSMNEG00000031632-9756.641Macaca_nemestrina
ENSTRUG00000000405RPA17460.502ENSMLEG00000038768-9853.817Mandrillus_leucophaeus
ENSTRUG00000000405RPA19969.748ENSMAMG00000020097RPA19969.018Mastacembelus_armatus
ENSTRUG00000000405RPA18668.578ENSMAMG00000017993rpa19968.925Mastacembelus_armatus
ENSTRUG00000000405RPA19171.101ENSMZEG00005007551rpa19971.495Maylandia_zebra
ENSTRUG00000000405RPA19967.041ENSMZEG00005024731RPA19966.436Maylandia_zebra
ENSTRUG00000000405RPA18761.050ENSMGAG00000005315RPA19855.086Meleagris_gallopavo
ENSTRUG00000000405RPA17562.100ENSMAUG00000010474Rpa19954.962Mesocricetus_auratus
ENSTRUG00000000405RPA18557.374ENSMICG00000012867RPA19954.702Microcebus_murinus
ENSTRUG00000000405RPA19853.817ENSMOCG00000013019Rpa110053.626Microtus_ochrogaster
ENSTRUG00000000405RPA17768.793ENSMMOG00000014292rpa19369.159Mola_mola
ENSTRUG00000000405RPA19883.226ENSMMOG00000010868RPA19883.645Mola_mola
ENSTRUG00000000405RPA18862.500ENSMODG00000010549RPA19963.084Monodelphis_domestica
ENSTRUG00000000405RPA17870.046ENSMALG00000011453rpa19170.188Monopterus_albus
ENSTRUG00000000405RPA19970.166ENSMALG00000001208RPA19970.506Monopterus_albus
ENSTRUG00000000405RPA18561.839MGP_CAROLIEiJ_G0016734Rpa19955.952Mus_caroli
ENSTRUG00000000405RPA17762.299ENSMUSG00000000751Rpa19956.349Mus_musculus
ENSTRUG00000000405RPA18562.299MGP_PahariEiJ_G0017871Rpa19962.850Mus_pahari
ENSTRUG00000000405RPA17762.529MGP_SPRETEiJ_G0017577Rpa19956.548Mus_spretus
ENSTRUG00000000405RPA19462.022ENSMPUG00000013119RPA19963.318Mustela_putorius_furo
ENSTRUG00000000405RPA18358.811ENSMLUG00000006113RPA19555.278Myotis_lucifugus
ENSTRUG00000000405RPA18161.982ENSNGAG00000004522Rpa19256.773Nannospalax_galili
ENSTRUG00000000405RPA19875.053ENSNBRG00000009672RPA19775.053Neolamprologus_brichardi
ENSTRUG00000000405RPA17370.872ENSNBRG00000020595rpa19171.262Neolamprologus_brichardi
ENSTRUG00000000405RPA17762.785ENSNLEG00000017149RPA19949.155Nomascus_leucogenys
ENSTRUG00000000405RPA17860.638ENSMEUG00000006714RPA18760.638Notamacropus_eugenii
ENSTRUG00000000405RPA18958.557ENSODEG00000009038RPA19558.351Octodon_degus
ENSTRUG00000000405RPA18670.642ENSONIG00000013135rpa19971.028Oreochromis_niloticus
ENSTRUG00000000405RPA18660.691ENSOANG00000010880RPA19960.435Ornithorhynchus_anatinus
ENSTRUG00000000405RPA18861.504ENSOCUG00000001504RPA19763.551Oryctolagus_cuniculus
ENSTRUG00000000405RPA19966.294ENSORLG00000003368RPA19966.154Oryzias_latipes
ENSTRUG00000000405RPA18669.476ENSORLG00000004856rpa19969.860Oryzias_latipes
ENSTRUG00000000405RPA18669.704ENSORLG00020008980rpa19970.093Oryzias_latipes_hni
ENSTRUG00000000405RPA19967.039ENSORLG00020015284RPA19966.435Oryzias_latipes_hni
ENSTRUG00000000405RPA16180.275ENSORLG00015005867-9878.427Oryzias_latipes_hsok
ENSTRUG00000000405RPA19966.014ENSORLG00015020383RPA19965.826Oryzias_latipes_hsok
ENSTRUG00000000405RPA18669.704ENSORLG00015013982rpa19970.093Oryzias_latipes_hsok
ENSTRUG00000000405RPA18265.284ENSOMEG00000004704rpa19367.681Oryzias_melastigma
ENSTRUG00000000405RPA19974.004ENSOMEG00000011040RPA19974.841Oryzias_melastigma
ENSTRUG00000000405RPA18957.059ENSOGAG00000005581-9956.667Otolemur_garnettii
ENSTRUG00000000405RPA18748.370ENSOGAG00000029379-9847.283Otolemur_garnettii
ENSTRUG00000000405RPA18160.086ENSOARG00000014479RPA19954.876Ovis_aries
ENSTRUG00000000405RPA17763.014ENSPPAG00000039680RPA19955.725Pan_paniscus
ENSTRUG00000000405RPA17963.014ENSPPRG00000011807RPA19163.934Panthera_pardus
ENSTRUG00000000405RPA17963.014ENSPTIG00000007898RPA19063.934Panthera_tigris_altaica
ENSTRUG00000000405RPA17762.785ENSPTRG00000008539RPA19955.534Pan_troglodytes
ENSTRUG00000000405RPA17762.557ENSPANG00000024592RPA19957.227Papio_anubis
ENSTRUG00000000405RPA18271.744ENSPKIG00000008053rpa19471.930Paramormyrops_kingsleyae
ENSTRUG00000000405RPA19655.766ENSPSIG00000015617RPA19855.766Pelodiscus_sinensis
ENSTRUG00000000405RPA17868.778ENSPMGG00000011589rpa19369.860Periophthalmus_magnuspinnatus
ENSTRUG00000000405RPA18876.316ENSPMGG00000000543RPA19976.316Periophthalmus_magnuspinnatus
ENSTRUG00000000405RPA18562.212ENSPEMG00000021061Rpa19954.808Peromyscus_maniculatus_bairdii
ENSTRUG00000000405RPA17763.158ENSPCIG00000019049RPA19963.551Phascolarctos_cinereus
ENSTRUG00000000405RPA19968.736ENSPFOG00000003987rpa19968.925Poecilia_formosa
ENSTRUG00000000405RPA19565.497ENSPLAG00000008844-9765.643Poecilia_latipinna
ENSTRUG00000000405RPA19962.055ENSPLAG00000004984rpa19968.925Poecilia_latipinna
ENSTRUG00000000405RPA19968.736ENSPMEG00000020602rpa19968.925Poecilia_mexicana
ENSTRUG00000000405RPA19565.300ENSPMEG00000003627-9765.497Poecilia_mexicana
ENSTRUG00000000405RPA18162.195ENSPREG00000010174rpa19462.720Poecilia_reticulata
ENSTRUG00000000405RPA19967.927ENSPREG00000010119RPA110067.251Poecilia_reticulata
ENSTRUG00000000405RPA18557.778ENSPCOG00000001799RPA19954.511Propithecus_coquereli
ENSTRUG00000000405RPA19258.824ENSPVAG00000002149RPA19957.692Pteropus_vampyrus
ENSTRUG00000000405RPA17971.330ENSPNYG00000016316rpa19271.729Pundamilia_nyererei
ENSTRUG00000000405RPA19967.181ENSPNYG00000024165RPA19967.181Pundamilia_nyererei
ENSTRUG00000000405RPA18460.739ENSPNAG00000008599rpa19561.358Pygocentrus_nattereri
ENSTRUG00000000405RPA17761.872ENSRNOG00000003123Rpa19955.106Rattus_norvegicus
ENSTRUG00000000405RPA19757.031ENSRBIG00000036587RPA19955.364Rhinopithecus_bieti
ENSTRUG00000000405RPA19752.734ENSRROG00000043278RPA19951.056Rhinopithecus_roxellana
ENSTRUG00000000405RPA15837.972YAR007CRFA16837.972Saccharomyces_cerevisiae
ENSTRUG00000000405RPA17162.785ENSSBOG00000030233RPA19756.886Saimiri_boliviensis_boliviensis
ENSTRUG00000000405RPA17463.616ENSSHAG00000007969RPA19564.019Sarcophilus_harrisii
ENSTRUG00000000405RPA18965.490ENSSFOG00015005362rpa19264.271Scleropages_formosus
ENSTRUG00000000405RPA19968.303ENSSMAG00000019746RPA19968.163Scophthalmus_maximus
ENSTRUG00000000405RPA18068.778ENSSDUG00000011949rpa19369.626Seriola_dumerili
ENSTRUG00000000405RPA19970.868ENSSDUG00000016358RPA19971.429Seriola_dumerili
ENSTRUG00000000405RPA18769.005ENSSLDG00000011806rpa19969.860Seriola_lalandi_dorsalis
ENSTRUG00000000405RPA19970.248ENSSLDG00000020784RPA19970.233Seriola_lalandi_dorsalis
ENSTRUG00000000405RPA16851.407ENSSARG00000007506RPA17256.587Sorex_araneus
ENSTRUG00000000405RPA18454.251ENSSPUG00000007223RPA19759.579Sphenodon_punctatus
ENSTRUG00000000405RPA19980.828ENSSPAG00000011165RPA19980.828Stegastes_partitus
ENSTRUG00000000405RPA18069.074ENSSPAG00000009903rpa19961.057Stegastes_partitus
ENSTRUG00000000405RPA17962.697ENSSSCG00000017822RPA19464.019Sus_scrofa
ENSTRUG00000000405RPA19060.394ENSTGUG00000005775RPA19962.383Taeniopygia_guttata
ENSTRUG00000000405RPA19963.618ENSTNIG00000016199rpa19469.231Tetraodon_nigroviridis
ENSTRUG00000000405RPA16163.073ENSTBEG00000002709RPA17263.551Tupaia_belangeri
ENSTRUG00000000405RPA17862.132ENSTTRG00000001169RPA19063.318Tursiops_truncatus
ENSTRUG00000000405RPA17175.000ENSUAMG00000015676RPA19075.000Ursus_americanus
ENSTRUG00000000405RPA18260.128ENSUMAG00000009328RPA19463.785Ursus_maritimus
ENSTRUG00000000405RPA18757.557ENSVPAG00000009443RPA19857.557Vicugna_pacos
ENSTRUG00000000405RPA18758.586ENSVVUG00000021715RPA19163.318Vulpes_vulpes
ENSTRUG00000000405RPA17962.528ENSXETG00000013538rpa19264.802Xenopus_tropicalis
ENSTRUG00000000405RPA18467.822ENSXCOG00000010068rpa19468.010Xiphophorus_couchianus
ENSTRUG00000000405RPA19475.252ENSXCOG00000009899-9971.780Xiphophorus_couchianus
ENSTRUG00000000405RPA19067.356ENSXMAG00000004102rpa19967.523Xiphophorus_maculatus
ENSTRUG00000000405RPA19967.321ENSXMAG00000010333RPA19966.759Xiphophorus_maculatus

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