EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000000415 (Gene tree)
Gene ID: 101077887
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2429 bases
Position: chr20:1316502-1318930
Accession: 101077887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000000979	zf-C2H2	PF00096.26	6.8e-30	1	6
ENSTRUP00000000979	zf-C2H2	PF00096.26	6.8e-30	2	6
ENSTRUP00000000979	zf-C2H2	PF00096.26	6.8e-30	3	6
ENSTRUP00000000979	zf-C2H2	PF00096.26	6.8e-30	4	6
ENSTRUP00000000979	zf-C2H2	PF00096.26	6.8e-30	5	6
ENSTRUP00000000979	zf-C2H2	PF00096.26	6.8e-30	6	6
ENSTRUP00000000979	zf-met	PF12874.7	1.6e-07	1	2
ENSTRUP00000000979	zf-met	PF12874.7	1.6e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000000982	-	1149	XM_003973868	ENSTRUP00000000979	382 (aa)	XP_003973917	H2RLG6

Gene Model

Click here to download ENSTRUG00000000415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000000415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000000415	gfi1ab	100	60.794	ENSTRUG00000004744	gfi1aa	100	60.891
ENSTRUG00000000415	gfi1ab	65	47.321	ENSTRUG00000000995	-	86	44.578
ENSTRUG00000000415	gfi1ab	54	33.721	ENSTRUG00000020495	si:dkey-89b17.4	63	41.584
ENSTRUG00000000415	gfi1ab	56	41.667	ENSTRUG00000015687	-	93	42.857
ENSTRUG00000000415	gfi1ab	52	43.210	ENSTRUG00000017456	znf236	58	43.210
ENSTRUG00000000415	gfi1ab	53	41.912	ENSTRUG00000019685	znf319b	85	41.912
ENSTRUG00000000415	gfi1ab	53	42.105	ENSTRUG00000023491	-	83	40.833
ENSTRUG00000000415	gfi1ab	51	44.643	ENSTRUG00000006896	-	84	44.643
ENSTRUG00000000415	gfi1ab	64	42.857	ENSTRUG00000005880	-	60	42.857
ENSTRUG00000000415	gfi1ab	100	52.356	ENSTRUG00000004525	gfi1b	100	52.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000000415	gfi1ab	100	60.329	ENSG00000162676	GFI1	100	61.033	Homo_sapiens
ENSTRUG00000000415	gfi1ab	100	78.462	ENSAPOG00000015189	gfi1ab	100	78.462	Acanthochromis_polyacanthus
ENSTRUG00000000415	gfi1ab	100	78.406	ENSACIG00000016354	gfi1ab	100	78.406	Amphilophus_citrinellus
ENSTRUG00000000415	gfi1ab	100	68.041	ENSAOCG00000008339	gfi1ab	100	68.041	Amphiprion_ocellaris
ENSTRUG00000000415	gfi1ab	100	78.205	ENSAPEG00000023870	gfi1ab	100	78.205	Amphiprion_percula
ENSTRUG00000000415	gfi1ab	100	76.227	ENSATEG00000009167	gfi1ab	89	76.227	Anabas_testudineus
ENSTRUG00000000415	gfi1ab	86	64.368	ENSAPLG00000015700	GFI1	99	63.689	Anas_platyrhynchos
ENSTRUG00000000415	gfi1ab	100	62.927	ENSACAG00000004498	GFI1	100	63.415	Anolis_carolinensis
ENSTRUG00000000415	gfi1ab	100	60.563	ENSANAG00000019656	GFI1	100	60.798	Aotus_nancymaae
ENSTRUG00000000415	gfi1ab	100	78.920	ENSACLG00000026458	gfi1ab	93	78.920	Astatotilapia_calliptera
ENSTRUG00000000415	gfi1ab	100	63.819	ENSAMXG00000039600	gfi1ab	100	63.819	Astyanax_mexicanus
ENSTRUG00000000415	gfi1ab	100	54.450	ENSAMXG00000006669	GFI1	86	64.706	Astyanax_mexicanus
ENSTRUG00000000415	gfi1ab	100	60.329	ENSBTAG00000016723	GFI1	100	60.563	Bos_taurus
ENSTRUG00000000415	gfi1ab	100	60.094	ENSCJAG00000017609	GFI1	100	60.798	Callithrix_jacchus
ENSTRUG00000000415	gfi1ab	100	59.813	ENSCAFG00000020155	GFI1	100	60.047	Canis_familiaris
ENSTRUG00000000415	gfi1ab	100	59.813	ENSCAFG00020013371	GFI1	88	59.813	Canis_lupus_dingo
ENSTRUG00000000415	gfi1ab	100	60.094	ENSCHIG00000016135	GFI1	100	60.563	Capra_hircus
ENSTRUG00000000415	gfi1ab	100	60.142	ENSCPOG00000011727	GFI1	100	60.142	Cavia_porcellus
ENSTRUG00000000415	gfi1ab	100	59.859	ENSCCAG00000036072	GFI1	100	60.563	Cebus_capucinus
ENSTRUG00000000415	gfi1ab	100	60.094	ENSCATG00000037873	GFI1	100	60.798	Cercocebus_atys
ENSTRUG00000000415	gfi1ab	91	85.437	ENSCLAG00000005915	GFI1	100	57.955	Chinchilla_lanigera
ENSTRUG00000000415	gfi1ab	98	54.620	ENSCSAG00000001469	GFI1	100	55.435	Chlorocebus_sabaeus
ENSTRUG00000000415	gfi1ab	100	60.094	ENSCANG00000034077	GFI1	100	60.798	Colobus_angolensis_palliatus
ENSTRUG00000000415	gfi1ab	100	58.581	ENSCGRG00001015432	Gfi1	100	58.974	Cricetulus_griseus_chok1gshd
ENSTRUG00000000415	gfi1ab	100	60.652	ENSCSEG00000017729	GFI1	100	60.902	Cynoglossus_semilaevis
ENSTRUG00000000415	gfi1ab	100	58.105	ENSCVAG00000004930	GFI1	100	59.169	Cyprinodon_variegatus
ENSTRUG00000000415	gfi1ab	100	74.359	ENSCVAG00000011828	gfi1ab	100	74.359	Cyprinodon_variegatus
ENSTRUG00000000415	gfi1ab	100	67.500	ENSDARG00000044457	gfi1ab	100	67.500	Danio_rerio
ENSTRUG00000000415	gfi1ab	100	59.207	ENSDNOG00000000782	GFI1	97	59.907	Dasypus_novemcinctus
ENSTRUG00000000415	gfi1ab	100	60.427	ENSEASG00005015509	GFI1	86	60.900	Equus_asinus_asinus
ENSTRUG00000000415	gfi1ab	98	51.750	ENSECAG00000006647	GFI1	94	52.250	Equus_caballus
ENSTRUG00000000415	gfi1ab	100	58.726	ENSEEUG00000000198	GFI1	100	59.390	Erinaceus_europaeus
ENSTRUG00000000415	gfi1ab	100	68.828	ENSELUG00000003015	gfi1ab	99	68.828	Esox_lucius
ENSTRUG00000000415	gfi1ab	100	60.902	ENSELUG00000019033	GFI1	100	61.153	Esox_lucius
ENSTRUG00000000415	gfi1ab	100	59.813	ENSFCAG00000005914	GFI1	100	60.047	Felis_catus
ENSTRUG00000000415	gfi1ab	100	76.215	ENSFHEG00000010997	gfi1ab	100	76.215	Fundulus_heteroclitus
ENSTRUG00000000415	gfi1ab	100	61.538	ENSFHEG00000000341	GFI1	100	61.787	Fundulus_heteroclitus
ENSTRUG00000000415	gfi1ab	100	71.756	ENSGMOG00000007737	gfi1ab	100	71.756	Gadus_morhua
ENSTRUG00000000415	gfi1ab	100	63.260	ENSGALG00000043650	GFI1	100	63.504	Gallus_gallus
ENSTRUG00000000415	gfi1ab	100	76.276	ENSGAFG00000016637	gfi1ab	100	76.276	Gambusia_affinis
ENSTRUG00000000415	gfi1ab	100	60.644	ENSGAFG00000018063	GFI1	100	60.891	Gambusia_affinis
ENSTRUG00000000415	gfi1ab	100	79.124	ENSGACG00000004257	gfi1ab	97	79.381	Gasterosteus_aculeatus
ENSTRUG00000000415	gfi1ab	100	60.329	ENSGGOG00000005320	GFI1	100	61.033	Gorilla_gorilla
ENSTRUG00000000415	gfi1ab	100	79.016	ENSHBUG00000011969	gfi1ab	100	79.016	Haplochromis_burtoni
ENSTRUG00000000415	gfi1ab	100	60.890	ENSHGLG00000008020	GFI1	100	61.124	Heterocephalus_glaber_female
ENSTRUG00000000415	gfi1ab	100	60.890	ENSHGLG00100000610	GFI1	100	61.124	Heterocephalus_glaber_male
ENSTRUG00000000415	gfi1ab	100	59.391	ENSHCOG00000019555	GFI1	100	64.164	Hippocampus_comes
ENSTRUG00000000415	gfi1ab	100	61.707	ENSHCOG00000008590	gfi1ab	100	60.488	Hippocampus_comes
ENSTRUG00000000415	gfi1ab	100	65.823	ENSIPUG00000010071	gfi1ab	87	66.076	Ictalurus_punctatus
ENSTRUG00000000415	gfi1ab	99	64.706	ENSIPUG00000021407	-	96	66.061	Ictalurus_punctatus
ENSTRUG00000000415	gfi1ab	100	60.202	ENSIPUG00000013414	GFI1	100	58.838	Ictalurus_punctatus
ENSTRUG00000000415	gfi1ab	100	60.329	ENSSTOG00000014583	GFI1	100	61.033	Ictidomys_tridecemlineatus
ENSTRUG00000000415	gfi1ab	100	75.773	ENSKMAG00000003810	gfi1ab	100	75.773	Kryptolebias_marmoratus
ENSTRUG00000000415	gfi1ab	100	79.389	ENSLBEG00000027776	gfi1ab	100	79.389	Labrus_bergylta
ENSTRUG00000000415	gfi1ab	99	46.354	ENSLACG00000017590	-	99	45.714	Latimeria_chalumnae
ENSTRUG00000000415	gfi1ab	100	64.589	ENSLACG00000013362	GFI1	98	64.589	Latimeria_chalumnae
ENSTRUG00000000415	gfi1ab	100	67.910	ENSLOCG00000004711	gfi1ab	100	68.159	Lepisosteus_oculatus
ENSTRUG00000000415	gfi1ab	100	61.165	ENSLAFG00000018346	GFI1	100	61.408	Loxodonta_africana
ENSTRUG00000000415	gfi1ab	100	60.094	ENSMFAG00000045801	GFI1	100	60.798	Macaca_fascicularis
ENSTRUG00000000415	gfi1ab	100	60.094	ENSMNEG00000036338	GFI1	100	60.798	Macaca_nemestrina
ENSTRUG00000000415	gfi1ab	100	60.094	ENSMLEG00000036181	GFI1	100	60.798	Mandrillus_leucophaeus
ENSTRUG00000000415	gfi1ab	100	78.866	ENSMAMG00000008125	gfi1ab	100	78.866	Mastacembelus_armatus
ENSTRUG00000000415	gfi1ab	100	78.663	ENSMZEG00005009895	gfi1ab	100	78.663	Maylandia_zebra
ENSTRUG00000000415	gfi1ab	86	64.841	ENSMGAG00000008187	GFI1	99	65.130	Meleagris_gallopavo
ENSTRUG00000000415	gfi1ab	100	58.920	ENSMICG00000047208	GFI1	100	59.155	Microcebus_murinus
ENSTRUG00000000415	gfi1ab	100	75.130	ENSMMOG00000005556	gfi1ab	100	75.130	Mola_mola
ENSTRUG00000000415	gfi1ab	100	59.540	ENSMODG00000011802	GFI1	100	60.000	Monodelphis_domestica
ENSTRUG00000000415	gfi1ab	100	76.804	ENSMALG00000014672	gfi1ab	100	76.804	Monopterus_albus
ENSTRUG00000000415	gfi1ab	100	59.207	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.037	Mus_caroli
ENSTRUG00000000415	gfi1ab	100	59.207	ENSMUSG00000029275	Gfi1	100	59.441	Mus_musculus
ENSTRUG00000000415	gfi1ab	100	59.441	MGP_PahariEiJ_G0017280	Gfi1	100	97.037	Mus_pahari
ENSTRUG00000000415	gfi1ab	100	58.974	MGP_SPRETEiJ_G0028507	Gfi1	100	59.441	Mus_spretus
ENSTRUG00000000415	gfi1ab	100	64.160	ENSMPUG00000004178	GFI1	97	64.411	Mustela_putorius_furo
ENSTRUG00000000415	gfi1ab	100	60.706	ENSMLUG00000015191	GFI1	97	60.471	Myotis_lucifugus
ENSTRUG00000000415	gfi1ab	100	78.626	ENSNBRG00000015774	gfi1ab	100	78.626	Neolamprologus_brichardi
ENSTRUG00000000415	gfi1ab	87	62.133	ENSNLEG00000010470	GFI1	92	63.200	Nomascus_leucogenys
ENSTRUG00000000415	gfi1ab	100	59.390	ENSOPRG00000001473	GFI1	100	59.859	Ochotona_princeps
ENSTRUG00000000415	gfi1ab	100	78.920	ENSONIG00000019246	gfi1ab	100	78.920	Oreochromis_niloticus
ENSTRUG00000000415	gfi1ab	98	54.133	ENSOCUG00000023553	GFI1	93	54.400	Oryctolagus_cuniculus
ENSTRUG00000000415	gfi1ab	100	62.972	ENSORLG00000005060	GFI1	100	62.312	Oryzias_latipes
ENSTRUG00000000415	gfi1ab	100	74.935	ENSORLG00000013806	gfi1ab	100	74.935	Oryzias_latipes
ENSTRUG00000000415	gfi1ab	100	74.227	ENSORLG00020001602	gfi1ab	100	74.227	Oryzias_latipes_hni
ENSTRUG00000000415	gfi1ab	100	56.234	ENSORLG00020002817	GFI1	100	65.306	Oryzias_latipes_hni
ENSTRUG00000000415	gfi1ab	100	61.209	ENSORLG00015006070	GFI1	100	61.809	Oryzias_latipes_hsok
ENSTRUG00000000415	gfi1ab	100	58.690	ENSOMEG00000016722	GFI1	100	58.313	Oryzias_melastigma
ENSTRUG00000000415	gfi1ab	100	64.062	ENSOGAG00000027913	GFI1	100	64.323	Otolemur_garnettii
ENSTRUG00000000415	gfi1ab	98	55.183	ENSOARG00000016329	GFI1	94	55.183	Ovis_aries
ENSTRUG00000000415	gfi1ab	100	65.625	ENSPPAG00000042186	GFI1	100	65.885	Pan_paniscus
ENSTRUG00000000415	gfi1ab	100	59.813	ENSPPRG00000007521	GFI1	100	60.047	Panthera_pardus
ENSTRUG00000000415	gfi1ab	100	60.329	ENSPTRG00000043053	GFI1	100	61.033	Pan_troglodytes
ENSTRUG00000000415	gfi1ab	100	60.094	ENSPANG00000016433	GFI1	100	60.798	Papio_anubis
ENSTRUG00000000415	gfi1ab	100	69.307	ENSPKIG00000004263	GFI1	100	69.307	Paramormyrops_kingsleyae
ENSTRUG00000000415	gfi1ab	88	63.277	ENSPSIG00000008734	GFI1	99	63.559	Pelodiscus_sinensis
ENSTRUG00000000415	gfi1ab	100	73.265	ENSPMGG00000012546	gfi1ab	100	73.846	Periophthalmus_magnuspinnatus
ENSTRUG00000000415	gfi1ab	99	54.090	ENSPMGG00000011041	GFI1	79	74.208	Periophthalmus_magnuspinnatus
ENSTRUG00000000415	gfi1ab	100	60.422	ENSPCIG00000013728	GFI1	100	59.861	Phascolarctos_cinereus
ENSTRUG00000000415	gfi1ab	100	75.765	ENSPFOG00000023214	gfi1ab	100	75.765	Poecilia_formosa
ENSTRUG00000000415	gfi1ab	100	75.765	ENSPLAG00000010879	gfi1ab	100	75.765	Poecilia_latipinna
ENSTRUG00000000415	gfi1ab	100	60.988	ENSPLAG00000005376	GFI1	91	61.235	Poecilia_latipinna
ENSTRUG00000000415	gfi1ab	100	61.347	ENSPMEG00000019299	GFI1	100	61.596	Poecilia_mexicana
ENSTRUG00000000415	gfi1ab	100	76.020	ENSPMEG00000013694	gfi1ab	100	76.020	Poecilia_mexicana
ENSTRUG00000000415	gfi1ab	100	76.667	ENSPREG00000014097	gfi1ab	100	76.667	Poecilia_reticulata
ENSTRUG00000000415	gfi1ab	100	56.812	ENSPREG00000007997	GFI1	100	56.812	Poecilia_reticulata
ENSTRUG00000000415	gfi1ab	100	48.019	ENSPCAG00000011020	GFI1	100	48.019	Procavia_capensis
ENSTRUG00000000415	gfi1ab	100	59.390	ENSPCOG00000020540	GFI1	100	60.094	Propithecus_coquereli
ENSTRUG00000000415	gfi1ab	100	60.280	ENSPVAG00000006928	GFI1	100	60.981	Pteropus_vampyrus
ENSTRUG00000000415	gfi1ab	100	78.920	ENSPNYG00000021183	gfi1ab	100	78.920	Pundamilia_nyererei
ENSTRUG00000000415	gfi1ab	100	62.712	ENSPNAG00000014299	-	58	62.712	Pygocentrus_nattereri
ENSTRUG00000000415	gfi1ab	100	65.316	ENSPNAG00000027258	gfi1ab	100	65.316	Pygocentrus_nattereri
ENSTRUG00000000415	gfi1ab	100	57.868	ENSPNAG00000028014	GFI1	100	57.868	Pygocentrus_nattereri
ENSTRUG00000000415	gfi1ab	100	59.016	ENSRNOG00000002042	Gfi1	100	59.251	Rattus_norvegicus
ENSTRUG00000000415	gfi1ab	100	60.094	ENSRBIG00000036467	GFI1	100	60.798	Rhinopithecus_bieti
ENSTRUG00000000415	gfi1ab	100	60.094	ENSRROG00000031687	GFI1	100	60.798	Rhinopithecus_roxellana
ENSTRUG00000000415	gfi1ab	100	60.094	ENSSBOG00000031300	GFI1	100	60.329	Saimiri_boliviensis_boliviensis
ENSTRUG00000000415	gfi1ab	100	70.175	ENSSFOG00015020295	gfi1	100	70.175	Scleropages_formosus
ENSTRUG00000000415	gfi1ab	100	76.786	ENSSMAG00000002782	gfi1ab	100	76.786	Scophthalmus_maximus
ENSTRUG00000000415	gfi1ab	100	77.876	ENSSMAG00000002798	-	98	77.876	Scophthalmus_maximus
ENSTRUG00000000415	gfi1ab	100	77.835	ENSSDUG00000022410	gfi1ab	100	78.093	Seriola_dumerili
ENSTRUG00000000415	gfi1ab	100	78.093	ENSSLDG00000020163	gfi1ab	100	78.351	Seriola_lalandi_dorsalis
ENSTRUG00000000415	gfi1ab	71	79.643	ENSSPAG00000009140	gfi1ab	100	84.375	Stegastes_partitus
ENSTRUG00000000415	gfi1ab	100	60.427	ENSSSCG00000006902	GFI1	100	61.137	Sus_scrofa
ENSTRUG00000000415	gfi1ab	84	65.875	ENSTGUG00000006060	GFI1	97	66.172	Taeniopygia_guttata
ENSTRUG00000000415	gfi1ab	100	79.897	ENSTNIG00000000651	gfi1ab	97	79.897	Tetraodon_nigroviridis
ENSTRUG00000000415	gfi1ab	100	60.377	ENSTTRG00000000082	GFI1	100	60.142	Tursiops_truncatus
ENSTRUG00000000415	gfi1ab	100	61.985	ENSUAMG00000021124	GFI1	91	61.985	Ursus_americanus
ENSTRUG00000000415	gfi1ab	100	62.594	ENSXETG00000023006	gfi1	98	62.843	Xenopus_tropicalis
ENSTRUG00000000415	gfi1ab	100	76.410	ENSXMAG00000010523	gfi1ab	100	76.410	Xiphophorus_maculatus
ENSTRUG00000000415	gfi1ab	85	54.310	ENSXMAG00000009274	GFI1	70	54.598	Xiphophorus_maculatus