EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000000542 (Gene tree)
Gene ID: 101061756
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9066 bases
Position: chrHE591950.1:53574-62639
Accession: 101061756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000051799	IBN_N	PF03810.19	6.7e-12	1	1
ENSTRUP00000001283	IBN_N	PF03810.19	2.7e-11	1	1
ENSTRUP00000051559	IBN_N	PF03810.19	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000001289	-	4084	XM_011617345	ENSTRUP00000001283	876 (aa)	XP_011615647	H2RMC0
ENSTRUT00000054727	-	4150	-	ENSTRUP00000051559	898 (aa)	-	-
ENSTRUT00000050838	-	786	-	ENSTRUP00000051799	261 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000000542's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000000542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000000542	kpnb1	100	90.297	ENSG00000108424	KPNB1	100	93.333	Homo_sapiens
ENSTRUG00000000542	kpnb1	100	96.119	ENSAPOG00000020572	kpnb1	100	96.119	Acanthochromis_polyacanthus
ENSTRUG00000000542	kpnb1	96	90.640	ENSAMEG00000004613	KPNB1	100	90.640	Ailuropoda_melanoleuca
ENSTRUG00000000542	kpnb1	98	95.911	ENSACIG00000023130	kpnb1	99	95.911	Amphilophus_citrinellus
ENSTRUG00000000542	kpnb1	100	96.119	ENSAOCG00000007048	kpnb1	100	96.119	Amphiprion_ocellaris
ENSTRUG00000000542	kpnb1	100	96.119	ENSAPEG00000008270	kpnb1	100	96.119	Amphiprion_percula
ENSTRUG00000000542	kpnb1	100	95.662	ENSATEG00000015139	kpnb1	100	95.662	Anabas_testudineus
ENSTRUG00000000542	kpnb1	96	89.822	ENSAPLG00000010177	KPNB1	96	89.822	Anas_platyrhynchos
ENSTRUG00000000542	kpnb1	100	90.411	ENSACAG00000007097	KPNB1	100	90.411	Anolis_carolinensis
ENSTRUG00000000542	kpnb1	100	87.557	ENSANAG00000024932	-	99	87.557	Aotus_nancymaae
ENSTRUG00000000542	kpnb1	100	95.662	ENSACLG00000015070	kpnb1	100	95.662	Astatotilapia_calliptera
ENSTRUG00000000542	kpnb1	100	94.521	ENSAMXG00000041903	kpnb1	100	94.521	Astyanax_mexicanus
ENSTRUG00000000542	kpnb1	100	90.639	ENSBTAG00000006586	KPNB1	100	90.639	Bos_taurus
ENSTRUG00000000542	kpnb1	99	47.895	WBGene00002075	imb-1	98	47.895	Caenorhabditis_elegans
ENSTRUG00000000542	kpnb1	100	90.411	ENSCJAG00000007834	KPNB1	100	90.411	Callithrix_jacchus
ENSTRUG00000000542	kpnb1	100	90.639	ENSCAFG00000016678	KPNB1	100	90.639	Canis_familiaris
ENSTRUG00000000542	kpnb1	100	90.639	ENSCAFG00020023205	KPNB1	100	90.639	Canis_lupus_dingo
ENSTRUG00000000542	kpnb1	100	90.639	ENSCHIG00000014896	KPNB1	100	90.639	Capra_hircus
ENSTRUG00000000542	kpnb1	100	88.699	ENSTSYG00000014472	KPNB1	99	88.699	Carlito_syrichta
ENSTRUG00000000542	kpnb1	96	90.629	ENSCAPG00000014185	KPNB1	100	90.629	Cavia_aperea
ENSTRUG00000000542	kpnb1	100	90.639	ENSCPOG00000006566	KPNB1	100	90.639	Cavia_porcellus
ENSTRUG00000000542	kpnb1	100	69.196	ENSCCAG00000018551	-	100	69.499	Cebus_capucinus
ENSTRUG00000000542	kpnb1	92	93.393	ENSCCAG00000029263	-	100	93.393	Cebus_capucinus
ENSTRUG00000000542	kpnb1	100	90.297	ENSCATG00000037124	KPNB1	100	90.297	Cercocebus_atys
ENSTRUG00000000542	kpnb1	100	90.525	ENSCLAG00000017091	KPNB1	100	90.525	Chinchilla_lanigera
ENSTRUG00000000542	kpnb1	100	90.297	ENSCSAG00000002605	KPNB1	100	90.297	Chlorocebus_sabaeus
ENSTRUG00000000542	kpnb1	74	83.019	ENSCHOG00000010604	KPNB1	73	83.019	Choloepus_hoffmanni
ENSTRUG00000000542	kpnb1	99	90.846	ENSCPBG00000027423	KPNB1	94	90.846	Chrysemys_picta_bellii
ENSTRUG00000000542	kpnb1	99	64.652	ENSCING00000004639	-	99	64.652	Ciona_intestinalis
ENSTRUG00000000542	kpnb1	100	62.034	ENSCSAVG00000008624	-	100	62.034	Ciona_savignyi
ENSTRUG00000000542	kpnb1	96	89.390	ENSCANG00000013489	KPNB1	100	89.390	Colobus_angolensis_palliatus
ENSTRUG00000000542	kpnb1	100	90.525	ENSCGRG00001016042	Kpnb1	100	90.525	Cricetulus_griseus_chok1gshd
ENSTRUG00000000542	kpnb1	96	90.510	ENSCGRG00000013910	Kpnb1	100	90.510	Cricetulus_griseus_crigri
ENSTRUG00000000542	kpnb1	97	92.019	ENSCSEG00000007991	kpnb1	100	92.019	Cynoglossus_semilaevis
ENSTRUG00000000542	kpnb1	64	95.210	ENSCVAG00000012454	-	93	95.210	Cyprinodon_variegatus
ENSTRUG00000000542	kpnb1	100	94.178	ENSDARG00000104889	kpnb1	100	94.178	Danio_rerio
ENSTRUG00000000542	kpnb1	99	61.416	FBgn0262743	Fs(2)Ket	99	61.416	Drosophila_melanogaster
ENSTRUG00000000542	kpnb1	98	79.466	ENSEBUG00000013869	kpnb1	98	79.466	Eptatretus_burgeri
ENSTRUG00000000542	kpnb1	100	90.639	ENSEASG00005000805	KPNB1	100	90.639	Equus_asinus_asinus
ENSTRUG00000000542	kpnb1	100	90.639	ENSECAG00000014560	KPNB1	100	90.639	Equus_caballus
ENSTRUG00000000542	kpnb1	85	92.462	ENSEEUG00000005046	KPNB1	88	92.462	Erinaceus_europaeus
ENSTRUG00000000542	kpnb1	100	94.977	ENSELUG00000015847	kpnb1	100	94.977	Esox_lucius
ENSTRUG00000000542	kpnb1	100	90.639	ENSFCAG00000023994	KPNB1	100	90.639	Felis_catus
ENSTRUG00000000542	kpnb1	96	90.866	ENSFDAG00000019923	KPNB1	100	90.866	Fukomys_damarensis
ENSTRUG00000000542	kpnb1	100	94.977	ENSFHEG00000020199	kpnb1	100	94.977	Fundulus_heteroclitus
ENSTRUG00000000542	kpnb1	100	89.840	ENSGMOG00000011607	kpnb1	99	89.840	Gadus_morhua
ENSTRUG00000000542	kpnb1	100	90.411	ENSGALG00000036962	KPNB1	100	90.411	Gallus_gallus
ENSTRUG00000000542	kpnb1	100	94.977	ENSGAFG00000000783	kpnb1	100	94.977	Gambusia_affinis
ENSTRUG00000000542	kpnb1	100	91.073	ENSGACG00000014765	kpnb1	100	91.073	Gasterosteus_aculeatus
ENSTRUG00000000542	kpnb1	96	90.261	ENSGAGG00000023737	KPNB1	92	90.261	Gopherus_agassizii
ENSTRUG00000000542	kpnb1	100	90.297	ENSGGOG00000008089	KPNB1	100	90.297	Gorilla_gorilla
ENSTRUG00000000542	kpnb1	100	95.662	ENSHBUG00000016826	kpnb1	100	95.662	Haplochromis_burtoni
ENSTRUG00000000542	kpnb1	100	90.868	ENSHGLG00000014138	KPNB1	100	90.868	Heterocephalus_glaber_female
ENSTRUG00000000542	kpnb1	96	90.866	ENSHGLG00100006572	KPNB1	100	90.866	Heterocephalus_glaber_male
ENSTRUG00000000542	kpnb1	100	92.123	ENSHCOG00000002084	kpnb1	100	92.123	Hippocampus_comes
ENSTRUG00000000542	kpnb1	99	89.687	ENSIPUG00000012402	kpnb1	95	89.687	Ictalurus_punctatus
ENSTRUG00000000542	kpnb1	100	90.639	ENSSTOG00000007896	KPNB1	100	90.639	Ictidomys_tridecemlineatus
ENSTRUG00000000542	kpnb1	100	90.525	ENSJJAG00000010909	Kpnb1	100	90.525	Jaculus_jaculus
ENSTRUG00000000542	kpnb1	100	94.863	ENSKMAG00000001547	kpnb1	100	94.863	Kryptolebias_marmoratus
ENSTRUG00000000542	kpnb1	99	95.040	ENSLBEG00000025794	kpnb1	99	93.099	Labrus_bergylta
ENSTRUG00000000542	kpnb1	88	90.143	ENSLACG00000017620	KPNB1	99	90.143	Latimeria_chalumnae
ENSTRUG00000000542	kpnb1	100	95.091	ENSLOCG00000013753	kpnb1	100	95.091	Lepisosteus_oculatus
ENSTRUG00000000542	kpnb1	100	85.845	ENSLAFG00000001328	KPNB1	100	85.845	Loxodonta_africana
ENSTRUG00000000542	kpnb1	99	87.858	ENSMFAG00000030197	KPNB1	100	90.273	Macaca_fascicularis
ENSTRUG00000000542	kpnb1	99	88.800	ENSMMUG00000019760	KPNB1	99	88.800	Macaca_mulatta
ENSTRUG00000000542	kpnb1	100	90.297	ENSMNEG00000040927	KPNB1	100	90.297	Macaca_nemestrina
ENSTRUG00000000542	kpnb1	100	87.900	ENSMLEG00000038185	KPNB1	99	87.900	Mandrillus_leucophaeus
ENSTRUG00000000542	kpnb1	100	96.005	ENSMAMG00000011036	kpnb1	100	96.005	Mastacembelus_armatus
ENSTRUG00000000542	kpnb1	100	95.662	ENSMZEG00005004564	kpnb1	100	95.662	Maylandia_zebra
ENSTRUG00000000542	kpnb1	55	89.441	ENSMGAG00000002770	-	100	89.441	Meleagris_gallopavo
ENSTRUG00000000542	kpnb1	100	90.525	ENSMAUG00000006211	Kpnb1	100	90.525	Mesocricetus_auratus
ENSTRUG00000000542	kpnb1	100	90.639	ENSMICG00000012059	KPNB1	84	90.639	Microcebus_murinus
ENSTRUG00000000542	kpnb1	100	90.525	ENSMOCG00000003683	Kpnb1	100	90.525	Microtus_ochrogaster
ENSTRUG00000000542	kpnb1	67	92.045	ENSMMOG00000012713	-	95	92.045	Mola_mola
ENSTRUG00000000542	kpnb1	100	90.868	ENSMODG00000012505	KPNB1	100	90.868	Monodelphis_domestica
ENSTRUG00000000542	kpnb1	100	96.461	ENSMALG00000000863	kpnb1	100	96.461	Monopterus_albus
ENSTRUG00000000542	kpnb1	94	90.876	MGP_CAROLIEiJ_G0017050	Kpnb1	100	90.876	Mus_caroli
ENSTRUG00000000542	kpnb1	100	90.411	ENSMUSG00000001440	Kpnb1	100	90.411	Mus_musculus
ENSTRUG00000000542	kpnb1	100	89.852	ENSMPUG00000015220	KPNB1	100	89.852	Mustela_putorius_furo
ENSTRUG00000000542	kpnb1	100	86.105	ENSMLUG00000014522	KPNB1	100	86.105	Myotis_lucifugus
ENSTRUG00000000542	kpnb1	96	90.510	ENSNGAG00000017610	Kpnb1	100	90.510	Nannospalax_galili
ENSTRUG00000000542	kpnb1	100	95.662	ENSNBRG00000019305	kpnb1	100	95.662	Neolamprologus_brichardi
ENSTRUG00000000542	kpnb1	100	90.297	ENSNLEG00000001446	KPNB1	100	90.297	Nomascus_leucogenys
ENSTRUG00000000542	kpnb1	100	85.388	ENSMEUG00000014284	KPNB1	100	85.388	Notamacropus_eugenii
ENSTRUG00000000542	kpnb1	100	90.525	ENSODEG00000017287	KPNB1	100	90.525	Octodon_degus
ENSTRUG00000000542	kpnb1	100	95.776	ENSONIG00000009269	kpnb1	100	95.776	Oreochromis_niloticus
ENSTRUG00000000542	kpnb1	100	90.639	ENSOCUG00000015425	KPNB1	100	90.639	Oryctolagus_cuniculus
ENSTRUG00000000542	kpnb1	100	95.434	ENSORLG00000019936	kpnb1	100	95.434	Oryzias_latipes
ENSTRUG00000000542	kpnb1	100	95.434	ENSORLG00020021181	kpnb1	100	95.434	Oryzias_latipes_hni
ENSTRUG00000000542	kpnb1	100	95.320	ENSORLG00015012177	kpnb1	100	95.320	Oryzias_latipes_hsok
ENSTRUG00000000542	kpnb1	100	95.548	ENSOMEG00000021022	kpnb1	100	95.548	Oryzias_melastigma
ENSTRUG00000000542	kpnb1	100	90.525	ENSOGAG00000006153	KPNB1	100	90.525	Otolemur_garnettii
ENSTRUG00000000542	kpnb1	97	90.047	ENSOARG00000008469	KPNB1	99	90.047	Ovis_aries
ENSTRUG00000000542	kpnb1	100	90.297	ENSPPAG00000028842	KPNB1	100	90.297	Pan_paniscus
ENSTRUG00000000542	kpnb1	97	90.319	ENSPPRG00000022879	KPNB1	97	90.319	Panthera_pardus
ENSTRUG00000000542	kpnb1	97	90.319	ENSPTIG00000006870	KPNB1	97	90.319	Panthera_tigris_altaica
ENSTRUG00000000542	kpnb1	100	90.297	ENSPTRG00000009333	KPNB1	100	90.297	Pan_troglodytes
ENSTRUG00000000542	kpnb1	100	90.297	ENSPANG00000022099	KPNB1	100	90.297	Papio_anubis
ENSTRUG00000000542	kpnb1	100	94.406	ENSPKIG00000017563	kpnb1	100	94.406	Paramormyrops_kingsleyae
ENSTRUG00000000542	kpnb1	96	90.629	ENSPSIG00000009775	KPNB1	100	90.629	Pelodiscus_sinensis
ENSTRUG00000000542	kpnb1	100	89.168	ENSPMGG00000001041	kpnb1	93	89.168	Periophthalmus_magnuspinnatus
ENSTRUG00000000542	kpnb1	100	90.525	ENSPEMG00000017783	Kpnb1	100	90.525	Peromyscus_maniculatus_bairdii
ENSTRUG00000000542	kpnb1	99	83.371	ENSPMAG00000007117	kpnb1	99	83.371	Petromyzon_marinus
ENSTRUG00000000542	kpnb1	100	90.868	ENSPCIG00000001034	KPNB1	100	90.868	Phascolarctos_cinereus
ENSTRUG00000000542	kpnb1	100	94.977	ENSPFOG00000009014	kpnb1	100	94.977	Poecilia_formosa
ENSTRUG00000000542	kpnb1	100	94.977	ENSPLAG00000010922	kpnb1	100	94.977	Poecilia_latipinna
ENSTRUG00000000542	kpnb1	69	89.617	ENSPMEG00000001107	-	98	89.674	Poecilia_mexicana
ENSTRUG00000000542	kpnb1	100	94.977	ENSPREG00000012268	kpnb1	100	94.977	Poecilia_reticulata
ENSTRUG00000000542	kpnb1	100	89.840	ENSPPYG00000025935	KPNB1	100	89.840	Pongo_abelii
ENSTRUG00000000542	kpnb1	68	96.667	ENSPCAG00000002526	KPNB1	72	96.667	Procavia_capensis
ENSTRUG00000000542	kpnb1	100	90.639	ENSPCOG00000026259	KPNB1	100	90.639	Propithecus_coquereli
ENSTRUG00000000542	kpnb1	100	90.183	ENSPVAG00000004910	KPNB1	100	90.183	Pteropus_vampyrus
ENSTRUG00000000542	kpnb1	100	91.376	ENSPNYG00000017703	kpnb1	96	95.663	Pundamilia_nyererei
ENSTRUG00000000542	kpnb1	99	86.598	ENSPNAG00000024047	kpnb1	98	86.598	Pygocentrus_nattereri
ENSTRUG00000000542	kpnb1	100	90.411	ENSRNOG00000009275	Kpnb1	100	90.411	Rattus_norvegicus
ENSTRUG00000000542	kpnb1	100	90.183	ENSRBIG00000002254	KPNB1	99	90.183	Rhinopithecus_bieti
ENSTRUG00000000542	kpnb1	99	89.723	ENSRROG00000030419	KPNB1	99	89.723	Rhinopithecus_roxellana
ENSTRUG00000000542	kpnb1	99	34.243	YLR347C	KAP95	99	34.243	Saccharomyces_cerevisiae
ENSTRUG00000000542	kpnb1	100	90.297	ENSSBOG00000030025	KPNB1	94	90.297	Saimiri_boliviensis_boliviensis
ENSTRUG00000000542	kpnb1	96	90.791	ENSSHAG00000018214	KPNB1	100	90.791	Sarcophilus_harrisii
ENSTRUG00000000542	kpnb1	100	95.205	ENSSFOG00015020000	kpnb1	100	95.205	Scleropages_formosus
ENSTRUG00000000542	kpnb1	100	96.233	ENSSDUG00000016218	kpnb1	100	96.233	Seriola_dumerili
ENSTRUG00000000542	kpnb1	98	96.154	ENSSLDG00000021549	kpnb1	97	96.154	Seriola_lalandi_dorsalis
ENSTRUG00000000542	kpnb1	100	90.297	ENSSPUG00000017799	KPNB1	100	90.297	Sphenodon_punctatus
ENSTRUG00000000542	kpnb1	100	95.890	ENSSPAG00000019346	kpnb1	100	95.890	Stegastes_partitus
ENSTRUG00000000542	kpnb1	100	90.639	ENSSSCG00000017514	KPNB1	100	90.639	Sus_scrofa
ENSTRUG00000000542	kpnb1	96	85.884	ENSTGUG00000003387	KPNB1	100	85.884	Taeniopygia_guttata
ENSTRUG00000000542	kpnb1	50	96.947	ENSTNIG00000019617	-	100	97.778	Tetraodon_nigroviridis
ENSTRUG00000000542	kpnb1	100	96.918	ENSTNIG00000006494	kpnb1	100	96.918	Tetraodon_nigroviridis
ENSTRUG00000000542	kpnb1	96	90.747	ENSTTRG00000004682	KPNB1	100	90.747	Tursiops_truncatus
ENSTRUG00000000542	kpnb1	100	90.639	ENSUAMG00000025344	KPNB1	99	90.639	Ursus_americanus
ENSTRUG00000000542	kpnb1	98	89.419	ENSUMAG00000016471	KPNB1	98	89.419	Ursus_maritimus
ENSTRUG00000000542	kpnb1	100	77.283	ENSVPAG00000003675	KPNB1	100	77.283	Vicugna_pacos
ENSTRUG00000000542	kpnb1	100	90.639	ENSVVUG00000003085	KPNB1	100	90.639	Vulpes_vulpes
ENSTRUG00000000542	kpnb1	100	89.840	ENSXETG00000014717	kpnb1	100	89.840	Xenopus_tropicalis
ENSTRUG00000000542	kpnb1	64	97.006	ENSXCOG00000001578	-	95	94.186	Xiphophorus_couchianus
ENSTRUG00000000542	kpnb1	100	94.863	ENSXMAG00000018792	kpnb1	100	94.863	Xiphophorus_maculatus