EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000000550 (Gene tree)
Gene ID: 101079003
Gene Symbol: rack1
Alias: gnb2l1|rack1|wu:fb80d08|wu:fk65d12
Full Name: receptor for activated C kinase 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3920 bases
Position: chr14:4749188-4753107
Accession: 101079003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000001297	eIF2A	PF08662.11	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000001303	-	1974	XM_003970393	ENSTRUP00000001297	317 (aa)	XP_003970442	H2RMD4

Gene Model

Click here to download ENSTRUG00000000550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000000550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000000550	rack1	95	30.952	ENSTRUG00000008853	prpf4	69	30.952
ENSTRUG00000000550	rack1	66	30.631	ENSTRUG00000021247	wdr61	92	30.631
ENSTRUG00000000550	rack1	96	31.356	ENSTRUG00000007900	POC1A	77	31.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000000550	rack1	96	79.793	ENSTSYG00000033831	-	100	65.615	Carlito_syrichta
ENSTRUG00000000550	rack1	100	95.268	ENSMAMG00000007841	rack1	100	95.268	Mastacembelus_armatus
ENSTRUG00000000550	rack1	100	95.584	ENSPFOG00000008165	rack1	98	95.584	Poecilia_formosa
ENSTRUG00000000550	rack1	100	95.584	ENSPMEG00000019993	rack1	100	95.584	Poecilia_mexicana
ENSTRUG00000000550	rack1	100	95.584	ENSPREG00000004039	rack1	100	95.584	Poecilia_reticulata
ENSTRUG00000000550	rack1	100	92.744	ENSPNAG00000000469	rack1	100	92.744	Pygocentrus_nattereri
ENSTRUG00000000550	rack1	100	94.006	ENSSMAG00000003589	rack1	100	94.006	Scophthalmus_maximus