EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000000995 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5017 bases
Position: chrHE592045.1:34942-39958
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	1	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	2	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	3	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	4	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	5	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	6	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	7	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	8	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	9	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	10	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	11	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	12	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	13	14
ENSTRUP00000002336	zf-C2H2	PF00096.26	9.2e-81	14	14
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	1	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	2	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	3	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	4	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	5	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	6	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	7	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	8	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	9	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	10	11
ENSTRUP00000052077	zf-C2H2	PF00096.26	6.5e-67	11	11
ENSTRUP00000052077	zf-met	PF12874.7	1.3e-23	1	6
ENSTRUP00000052077	zf-met	PF12874.7	1.3e-23	2	6
ENSTRUP00000052077	zf-met	PF12874.7	1.3e-23	3	6
ENSTRUP00000052077	zf-met	PF12874.7	1.3e-23	4	6
ENSTRUP00000052077	zf-met	PF12874.7	1.3e-23	5	6
ENSTRUP00000052077	zf-met	PF12874.7	1.3e-23	6	6
ENSTRUP00000002336	zf-met	PF12874.7	3.2e-23	1	4
ENSTRUP00000002336	zf-met	PF12874.7	3.2e-23	2	4
ENSTRUP00000002336	zf-met	PF12874.7	3.2e-23	3	4
ENSTRUP00000002336	zf-met	PF12874.7	3.2e-23	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000002346	-	2348	-	ENSTRUP00000002336	679 (aa)	-	H2RQC1
ENSTRUT00000054941	-	1413	-	ENSTRUP00000052077	470 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000000995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000000995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000000995	-	80	44.578	ENSTRUG00000004525	gfi1b	69	44.578
ENSTRUG00000000995	-	71	39.921	ENSTRUG00000008615	zbtb48	56	37.425
ENSTRUG00000000995	-	72	42.105	ENSTRUG00000022843	-	68	42.105
ENSTRUG00000000995	-	99	71.908	ENSTRUG00000021765	-	99	71.908
ENSTRUG00000000995	-	71	37.920	ENSTRUG00000013850	prdm5	78	36.585
ENSTRUG00000000995	-	70	47.107	ENSTRUG00000003277	zbtb17	95	47.154
ENSTRUG00000000995	-	70	55.932	ENSTRUG00000022969	-	72	55.932
ENSTRUG00000000995	-	86	44.578	ENSTRUG00000000415	gfi1ab	65	47.321
ENSTRUG00000000995	-	71	42.574	ENSTRUG00000000419	sna2	90	42.500
ENSTRUG00000000995	-	73	42.308	ENSTRUG00000022076	-	93	37.662
ENSTRUG00000000995	-	67	32.601	ENSTRUG00000005241	gtf3ab	81	34.444
ENSTRUG00000000995	-	77	35.246	ENSTRUG00000012157	-	92	37.143
ENSTRUG00000000995	-	70	47.059	ENSTRUG00000005321	-	96	47.059
ENSTRUG00000000995	-	70	39.623	ENSTRUG00000011637	scrt1b	61	39.623
ENSTRUG00000000995	-	70	41.379	ENSTRUG00000021167	-	99	41.379
ENSTRUG00000000995	-	87	46.341	ENSTRUG00000006896	-	96	44.853
ENSTRUG00000000995	-	84	38.630	ENSTRUG00000015687	-	99	43.750
ENSTRUG00000000995	-	75	60.961	ENSTRUG00000013906	-	94	59.391
ENSTRUG00000000995	-	70	30.857	ENSTRUG00000016621	hinfp	76	31.868
ENSTRUG00000000995	-	83	40.328	ENSTRUG00000024073	-	76	42.244
ENSTRUG00000000995	-	70	62.814	ENSTRUG00000022919	-	91	64.923
ENSTRUG00000000995	-	69	41.438	ENSTRUG00000021675	-	90	41.438
ENSTRUG00000000995	-	70	35.366	ENSTRUG00000006180	si:ch211-216l23.1	96	33.750
ENSTRUG00000000995	-	69	41.045	ENSTRUG00000012719	-	51	41.045
ENSTRUG00000000995	-	99	44.343	ENSTRUG00000019483	-	100	51.613
ENSTRUG00000000995	-	99	73.438	ENSTRUG00000022515	-	100	69.748
ENSTRUG00000000995	-	76	33.333	ENSTRUG00000024008	-	53	40.741
ENSTRUG00000000995	-	71	36.364	ENSTRUG00000003454	-	68	39.175
ENSTRUG00000000995	-	87	51.887	ENSTRUG00000012273	-	98	51.887
ENSTRUG00000000995	-	99	49.545	ENSTRUG00000020582	-	100	49.545
ENSTRUG00000000995	-	69	41.045	ENSTRUG00000019558	-	54	41.045
ENSTRUG00000000995	-	92	44.872	ENSTRUG00000017456	znf236	79	36.957
ENSTRUG00000000995	-	82	45.312	ENSTRUG00000022066	-	91	48.276
ENSTRUG00000000995	-	71	40.000	ENSTRUG00000022666	-	51	42.857
ENSTRUG00000000995	-	70	64.550	ENSTRUG00000005180	-	86	64.740
ENSTRUG00000000995	-	74	31.873	ENSTRUG00000025597	znf646	98	31.873
ENSTRUG00000000995	-	80	33.333	ENSTRUG00000005880	-	67	33.333
ENSTRUG00000000995	-	71	38.255	ENSTRUG00000015366	patz1	68	38.255
ENSTRUG00000000995	-	90	71.462	ENSTRUG00000023925	-	96	65.833
ENSTRUG00000000995	-	71	38.967	ENSTRUG00000011097	-	72	37.824
ENSTRUG00000000995	-	100	72.495	ENSTRUG00000001268	-	97	72.495
ENSTRUG00000000995	-	84	45.783	ENSTRUG00000023491	-	97	45.783
ENSTRUG00000000995	-	80	34.250	ENSTRUG00000019685	znf319b	89	37.255
ENSTRUG00000000995	-	87	39.568	ENSTRUG00000007620	scrt2	81	39.568
ENSTRUG00000000995	-	71	36.923	ENSTRUG00000020495	si:dkey-89b17.4	85	30.455
ENSTRUG00000000995	-	70	64.912	ENSTRUG00000003111	-	87	64.912
ENSTRUG00000000995	-	71	66.667	ENSTRUG00000025189	-	77	64.957
ENSTRUG00000000995	-	86	41.071	ENSTRUG00000011385	znf341	52	41.071
ENSTRUG00000000995	-	78	34.337	ENSTRUG00000014476	-	93	34.337
ENSTRUG00000000995	-	94	65.657	ENSTRUG00000007022	-	93	65.436
ENSTRUG00000000995	-	71	47.727	ENSTRUG00000025881	-	66	40.798
ENSTRUG00000000995	-	84	36.036	ENSTRUG00000009203	zbtb41	56	38.545
ENSTRUG00000000995	-	68	51.004	ENSTRUG00000019940	-	51	51.004
ENSTRUG00000000995	-	71	42.609	ENSTRUG00000025588	snai2	54	42.609
ENSTRUG00000000995	-	78	46.875	ENSTRUG00000003369	sall3b	57	48.837
ENSTRUG00000000995	-	72	32.850	ENSTRUG00000001452	PRDM15	53	32.850
ENSTRUG00000000995	-	70	49.398	ENSTRUG00000022391	-	51	49.398
ENSTRUG00000000995	-	91	62.272	ENSTRUG00000020208	-	97	56.098
ENSTRUG00000000995	-	99	74.853	ENSTRUG00000022206	-	98	74.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000000995	-	82	42.857	ENSEBUG00000014667	-	82	46.012	Eptatretus_burgeri
ENSTRUG00000000995	-	70	40.000	ENSELUG00000002844	-	57	40.984	Esox_lucius
ENSTRUG00000000995	-	99	51.538	ENSFHEG00000011378	-	97	51.538	Fundulus_heteroclitus
ENSTRUG00000000995	-	76	42.857	ENSIPUG00000007076	-	91	45.833	Ictalurus_punctatus
ENSTRUG00000000995	-	77	42.520	ENSKMAG00000012934	-	92	43.333	Kryptolebias_marmoratus
ENSTRUG00000000995	-	70	41.007	ENSMMOG00000011221	-	95	41.007	Mola_mola
ENSTRUG00000000995	-	70	40.000	ENSOANG00000010666	-	73	40.000	Ornithorhynchus_anatinus
ENSTRUG00000000995	-	70	43.860	ENSORLG00000026463	-	66	46.296	Oryzias_latipes
ENSTRUG00000000995	-	86	40.823	ENSPLAG00000023496	-	67	40.134	Poecilia_latipinna
ENSTRUG00000000995	-	84	40.506	ENSPMEG00000014109	-	77	49.107	Poecilia_mexicana
ENSTRUG00000000995	-	75	38.522	ENSPNYG00000022227	-	52	42.786	Pundamilia_nyererei
ENSTRUG00000000995	-	70	44.300	ENSPNAG00000000303	-	67	44.481	Pygocentrus_nattereri
ENSTRUG00000000995	-	70	49.462	ENSPNAG00000010678	-	88	49.462	Pygocentrus_nattereri