EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000001088 (Gene tree)
Gene ID: 101074596
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7152 bases
Position: chr19:13711548-13718699
Accession: 101074596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000002548	PolyA_pol	PF01743.20	1.4e-34	1	1
ENSTRUP00000054356	PolyA_pol	PF01743.20	1.4e-34	1	1
ENSTRUP00000002549	PolyA_pol	PF01743.20	1.4e-34	1	1
ENSTRUP00000050089	PolyA_pol	PF01743.20	1.4e-34	1	1
ENSTRUP00000056236	PolyA_pol	PF01743.20	1.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057092	-	2008	XM_011614395	ENSTRUP00000050089	427 (aa)	XP_011612697	UPI0005D28F65
ENSTRUT00000054438	-	2182	-	ENSTRUP00000056236	427 (aa)	-	UPI0005D28F65
ENSTRUT00000002560	-	1924	-	ENSTRUP00000002548	427 (aa)	-	H2RQY2
ENSTRUT00000002561	-	1886	-	ENSTRUP00000002549	427 (aa)	-	H2RQY3
ENSTRUT00000051474	-	2182	-	ENSTRUP00000054356	427 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000001088's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000001088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000001088	trnt1	95	69.951	ENSG00000072756	TRNT1	94	69.951	Homo_sapiens
ENSTRUG00000001088	trnt1	99	81.412	ENSAPOG00000013687	trnt1	99	81.412	Acanthochromis_polyacanthus
ENSTRUG00000001088	trnt1	99	67.213	ENSAMEG00000014520	TRNT1	98	67.213	Ailuropoda_melanoleuca
ENSTRUG00000001088	trnt1	99	84.742	ENSACIG00000021706	trnt1	99	84.742	Amphilophus_citrinellus
ENSTRUG00000001088	trnt1	99	83.568	ENSAOCG00000024612	trnt1	99	83.568	Amphiprion_ocellaris
ENSTRUG00000001088	trnt1	98	75.120	ENSAPEG00000022627	trnt1	97	75.120	Amphiprion_percula
ENSTRUG00000001088	trnt1	95	86.881	ENSATEG00000008928	trnt1	100	86.881	Anabas_testudineus
ENSTRUG00000001088	trnt1	94	65.261	ENSAPLG00000004258	TRNT1	99	65.261	Anas_platyrhynchos
ENSTRUG00000001088	trnt1	96	66.748	ENSACAG00000005657	TRNT1	93	66.748	Anolis_carolinensis
ENSTRUG00000001088	trnt1	99	67.765	ENSANAG00000024802	TRNT1	98	67.765	Aotus_nancymaae
ENSTRUG00000001088	trnt1	99	84.038	ENSACLG00000022227	trnt1	99	84.038	Astatotilapia_calliptera
ENSTRUG00000001088	trnt1	99	75.234	ENSAMXG00000003960	trnt1	99	75.234	Astyanax_mexicanus
ENSTRUG00000001088	trnt1	99	66.118	ENSBTAG00000019534	TRNT1	98	66.118	Bos_taurus
ENSTRUG00000001088	trnt1	95	45.521	WBGene00010089	hpo-31	94	45.521	Caenorhabditis_elegans
ENSTRUG00000001088	trnt1	99	67.529	ENSCJAG00000015466	TRNT1	98	67.529	Callithrix_jacchus
ENSTRUG00000001088	trnt1	97	68.182	ENSCAFG00000005985	TRNT1	96	68.182	Canis_familiaris
ENSTRUG00000001088	trnt1	97	68.182	ENSCAFG00020014746	TRNT1	96	68.182	Canis_lupus_dingo
ENSTRUG00000001088	trnt1	99	66.824	ENSCHIG00000007030	TRNT1	97	66.824	Capra_hircus
ENSTRUG00000001088	trnt1	99	67.529	ENSTSYG00000013390	TRNT1	98	67.529	Carlito_syrichta
ENSTRUG00000001088	trnt1	88	55.053	ENSCAPG00000006891	TRNT1	99	55.053	Cavia_aperea
ENSTRUG00000001088	trnt1	99	66.118	ENSCPOG00000007849	TRNT1	98	66.118	Cavia_porcellus
ENSTRUG00000001088	trnt1	96	67.391	ENSCCAG00000002919	TRNT1	99	67.391	Cebus_capucinus
ENSTRUG00000001088	trnt1	95	70.443	ENSCATG00000031985	TRNT1	92	70.443	Cercocebus_atys
ENSTRUG00000001088	trnt1	99	67.765	ENSCLAG00000005186	TRNT1	92	75.510	Chinchilla_lanigera
ENSTRUG00000001088	trnt1	95	70.443	ENSCSAG00000011052	TRNT1	94	70.443	Chlorocebus_sabaeus
ENSTRUG00000001088	trnt1	84	74.359	ENSCHOG00000005712	TRNT1	83	74.359	Choloepus_hoffmanni
ENSTRUG00000001088	trnt1	96	68.382	ENSCPBG00000017636	TRNT1	93	68.382	Chrysemys_picta_bellii
ENSTRUG00000001088	trnt1	95	41.626	ENSCING00000007069	-	99	41.626	Ciona_intestinalis
ENSTRUG00000001088	trnt1	94	41.584	ENSCSAVG00000007494	-	95	41.584	Ciona_savignyi
ENSTRUG00000001088	trnt1	95	70.443	ENSCANG00000039030	TRNT1	94	70.443	Colobus_angolensis_palliatus
ENSTRUG00000001088	trnt1	99	66.588	ENSCGRG00001009998	Trnt1	98	66.588	Cricetulus_griseus_chok1gshd
ENSTRUG00000001088	trnt1	99	66.588	ENSCGRG00000013410	Trnt1	94	74.372	Cricetulus_griseus_crigri
ENSTRUG00000001088	trnt1	99	79.108	ENSCSEG00000008157	trnt1	99	79.108	Cynoglossus_semilaevis
ENSTRUG00000001088	trnt1	99	81.221	ENSCVAG00000019770	trnt1	99	81.221	Cyprinodon_variegatus
ENSTRUG00000001088	trnt1	99	77.465	ENSDARG00000075297	trnt1	99	77.465	Danio_rerio
ENSTRUG00000001088	trnt1	99	68.941	ENSDNOG00000008837	TRNT1	98	68.941	Dasypus_novemcinctus
ENSTRUG00000001088	trnt1	96	69.853	ENSDORG00000014035	Trnt1	94	69.853	Dipodomys_ordii
ENSTRUG00000001088	trnt1	94	49.261	FBgn0037369	CG2100	84	49.261	Drosophila_melanogaster
ENSTRUG00000001088	trnt1	56	74.689	ENSETEG00000018177	TRNT1	97	74.689	Echinops_telfairi
ENSTRUG00000001088	trnt1	99	62.441	ENSEBUG00000012779	-	99	62.441	Eptatretus_burgeri
ENSTRUG00000001088	trnt1	99	68.471	ENSEASG00005003577	TRNT1	98	68.471	Equus_asinus_asinus
ENSTRUG00000001088	trnt1	99	68.706	ENSECAG00000014420	TRNT1	98	68.706	Equus_caballus
ENSTRUG00000001088	trnt1	99	66.824	ENSEEUG00000009567	TRNT1	98	66.824	Erinaceus_europaeus
ENSTRUG00000001088	trnt1	99	77.986	ENSELUG00000003802	trnt1	99	77.986	Esox_lucius
ENSTRUG00000001088	trnt1	99	67.294	ENSFCAG00000026805	TRNT1	97	67.294	Felis_catus
ENSTRUG00000001088	trnt1	90	67.624	ENSFALG00000013539	TRNT1	99	67.624	Ficedula_albicollis
ENSTRUG00000001088	trnt1	99	66.824	ENSFDAG00000018412	TRNT1	98	66.824	Fukomys_damarensis
ENSTRUG00000001088	trnt1	99	81.455	ENSFHEG00000019294	trnt1	99	81.455	Fundulus_heteroclitus
ENSTRUG00000001088	trnt1	99	78.169	ENSGMOG00000007460	trnt1	100	78.169	Gadus_morhua
ENSTRUG00000001088	trnt1	99	63.488	ENSGALG00000017368	TRNT1	99	63.488	Gallus_gallus
ENSTRUG00000001088	trnt1	99	80.047	ENSGAFG00000008647	trnt1	99	80.047	Gambusia_affinis
ENSTRUG00000001088	trnt1	100	81.967	ENSGACG00000011903	trnt1	100	81.967	Gasterosteus_aculeatus
ENSTRUG00000001088	trnt1	96	69.363	ENSGAGG00000020942	TRNT1	93	69.363	Gopherus_agassizii
ENSTRUG00000001088	trnt1	99	67.529	ENSGGOG00000015286	TRNT1	98	67.529	Gorilla_gorilla
ENSTRUG00000001088	trnt1	99	84.272	ENSHBUG00000002797	trnt1	99	84.272	Haplochromis_burtoni
ENSTRUG00000001088	trnt1	99	66.588	ENSHGLG00000003649	TRNT1	98	66.588	Heterocephalus_glaber_female
ENSTRUG00000001088	trnt1	95	64.128	ENSHGLG00000000221	-	94	64.128	Heterocephalus_glaber_female
ENSTRUG00000001088	trnt1	99	65.412	ENSHGLG00100016421	TRNT1	98	65.412	Heterocephalus_glaber_male
ENSTRUG00000001088	trnt1	100	76.581	ENSHCOG00000010618	trnt1	100	76.581	Hippocampus_comes
ENSTRUG00000001088	trnt1	99	75.935	ENSIPUG00000000971	trnt1	99	75.935	Ictalurus_punctatus
ENSTRUG00000001088	trnt1	96	69.608	ENSSTOG00000000150	TRNT1	86	80.447	Ictidomys_tridecemlineatus
ENSTRUG00000001088	trnt1	99	66.901	ENSJJAG00000018561	Trnt1	98	66.901	Jaculus_jaculus
ENSTRUG00000001088	trnt1	99	80.282	ENSKMAG00000011307	trnt1	99	80.282	Kryptolebias_marmoratus
ENSTRUG00000001088	trnt1	98	76.316	ENSLBEG00000019457	trnt1	99	76.316	Labrus_bergylta
ENSTRUG00000001088	trnt1	96	69.756	ENSLACG00000013227	TRNT1	94	69.756	Latimeria_chalumnae
ENSTRUG00000001088	trnt1	99	71.329	ENSLOCG00000011105	trnt1	98	71.329	Lepisosteus_oculatus
ENSTRUG00000001088	trnt1	99	67.765	ENSLAFG00000023191	TRNT1	98	67.765	Loxodonta_africana
ENSTRUG00000001088	trnt1	95	70.443	ENSMFAG00000045113	TRNT1	92	70.443	Macaca_fascicularis
ENSTRUG00000001088	trnt1	95	70.443	ENSMMUG00000017983	TRNT1	92	70.443	Macaca_mulatta
ENSTRUG00000001088	trnt1	95	70.443	ENSMNEG00000037805	TRNT1	92	70.443	Macaca_nemestrina
ENSTRUG00000001088	trnt1	90	70.496	ENSMLEG00000033671	TRNT1	100	70.496	Mandrillus_leucophaeus
ENSTRUG00000001088	trnt1	99	83.333	ENSMAMG00000023401	trnt1	99	83.333	Mastacembelus_armatus
ENSTRUG00000001088	trnt1	99	84.038	ENSMZEG00005009141	trnt1	99	84.038	Maylandia_zebra
ENSTRUG00000001088	trnt1	75	64.577	ENSMGAG00000009971	TRNT1	99	64.577	Meleagris_gallopavo
ENSTRUG00000001088	trnt1	99	66.588	ENSMAUG00000020707	Trnt1	98	66.588	Mesocricetus_auratus
ENSTRUG00000001088	trnt1	99	68.000	ENSMICG00000016615	TRNT1	98	68.000	Microcebus_murinus
ENSTRUG00000001088	trnt1	99	66.824	ENSMOCG00000004539	Trnt1	98	66.824	Microtus_ochrogaster
ENSTRUG00000001088	trnt1	100	81.733	ENSMMOG00000010742	trnt1	100	81.733	Mola_mola
ENSTRUG00000001088	trnt1	97	67.470	ENSMODG00000004368	TRNT1	96	67.470	Monodelphis_domestica
ENSTRUG00000001088	trnt1	99	80.986	ENSMALG00000008376	trnt1	99	80.986	Monopterus_albus
ENSTRUG00000001088	trnt1	96	69.118	MGP_CAROLIEiJ_G0028698	Trnt1	90	75.820	Mus_caroli
ENSTRUG00000001088	trnt1	96	69.363	ENSMUSG00000013736	Trnt1	83	81.564	Mus_musculus
ENSTRUG00000001088	trnt1	96	70.098	MGP_PahariEiJ_G0022449	Trnt1	88	82.682	Mus_pahari
ENSTRUG00000001088	trnt1	96	69.118	MGP_SPRETEiJ_G0029726	Trnt1	83	81.564	Mus_spretus
ENSTRUG00000001088	trnt1	99	66.588	ENSMPUG00000017017	TRNT1	97	66.588	Mustela_putorius_furo
ENSTRUG00000001088	trnt1	90	69.010	ENSMLUG00000011864	TRNT1	99	69.010	Myotis_lucifugus
ENSTRUG00000001088	trnt1	96	68.382	ENSNGAG00000000537	Trnt1	94	68.382	Nannospalax_galili
ENSTRUG00000001088	trnt1	81	84.971	ENSNBRG00000023606	trnt1	99	84.971	Neolamprologus_brichardi
ENSTRUG00000001088	trnt1	95	70.443	ENSNLEG00000003226	TRNT1	94	70.443	Nomascus_leucogenys
ENSTRUG00000001088	trnt1	99	66.508	ENSMEUG00000004684	TRNT1	97	66.508	Notamacropus_eugenii
ENSTRUG00000001088	trnt1	89	65.969	ENSOPRG00000015067	TRNT1	99	65.969	Ochotona_princeps
ENSTRUG00000001088	trnt1	99	67.294	ENSODEG00000007597	TRNT1	98	67.294	Octodon_degus
ENSTRUG00000001088	trnt1	99	85.211	ENSONIG00000020273	trnt1	98	85.211	Oreochromis_niloticus
ENSTRUG00000001088	trnt1	95	65.764	ENSOANG00000007514	TRNT1	94	65.764	Ornithorhynchus_anatinus
ENSTRUG00000001088	trnt1	95	66.585	ENSOCUG00000008580	TRNT1	94	66.585	Oryctolagus_cuniculus
ENSTRUG00000001088	trnt1	99	75.467	ENSORLG00000003165	trnt1	99	75.467	Oryzias_latipes
ENSTRUG00000001088	trnt1	99	75.467	ENSORLG00020022060	trnt1	99	75.467	Oryzias_latipes_hni
ENSTRUG00000001088	trnt1	99	75.467	ENSORLG00015018915	trnt1	99	75.467	Oryzias_latipes_hsok
ENSTRUG00000001088	trnt1	99	73.944	ENSOMEG00000003331	trnt1	99	73.944	Oryzias_melastigma
ENSTRUG00000001088	trnt1	99	66.824	ENSOARG00000008631	TRNT1	97	66.824	Ovis_aries
ENSTRUG00000001088	trnt1	99	67.294	ENSPPAG00000043566	TRNT1	98	67.294	Pan_paniscus
ENSTRUG00000001088	trnt1	99	67.294	ENSPPRG00000001327	TRNT1	97	67.294	Panthera_pardus
ENSTRUG00000001088	trnt1	99	67.294	ENSPTIG00000011448	TRNT1	97	67.294	Panthera_tigris_altaica
ENSTRUG00000001088	trnt1	99	67.294	ENSPTRG00000014564	TRNT1	98	67.294	Pan_troglodytes
ENSTRUG00000001088	trnt1	95	70.443	ENSPANG00000025944	TRNT1	92	70.443	Papio_anubis
ENSTRUG00000001088	trnt1	99	72.791	ENSPKIG00000020015	trnt1	99	72.791	Paramormyrops_kingsleyae
ENSTRUG00000001088	trnt1	93	68.608	ENSPSIG00000017356	TRNT1	99	69.359	Pelodiscus_sinensis
ENSTRUG00000001088	trnt1	100	77.986	ENSPMGG00000008888	trnt1	99	77.986	Periophthalmus_magnuspinnatus
ENSTRUG00000001088	trnt1	99	66.353	ENSPEMG00000019845	Trnt1	98	66.353	Peromyscus_maniculatus_bairdii
ENSTRUG00000001088	trnt1	99	66.435	ENSPCIG00000030436	TRNT1	99	66.435	Phascolarctos_cinereus
ENSTRUG00000001088	trnt1	99	80.851	ENSPFOG00000006194	trnt1	99	80.851	Poecilia_formosa
ENSTRUG00000001088	trnt1	99	80.851	ENSPLAG00000015623	trnt1	99	82.878	Poecilia_latipinna
ENSTRUG00000001088	trnt1	99	80.986	ENSPMEG00000012216	trnt1	99	82.878	Poecilia_mexicana
ENSTRUG00000001088	trnt1	99	80.282	ENSPREG00000021470	trnt1	99	80.282	Poecilia_reticulata
ENSTRUG00000001088	trnt1	99	67.294	ENSPPYG00000013702	TRNT1	98	67.294	Pongo_abelii
ENSTRUG00000001088	trnt1	89	70.157	ENSPCAG00000001951	TRNT1	99	70.157	Procavia_capensis
ENSTRUG00000001088	trnt1	99	67.765	ENSPCOG00000022228	TRNT1	98	67.765	Propithecus_coquereli
ENSTRUG00000001088	trnt1	89	69.372	ENSPVAG00000008784	TRNT1	99	69.372	Pteropus_vampyrus
ENSTRUG00000001088	trnt1	99	84.038	ENSPNYG00000003120	trnt1	99	84.038	Pundamilia_nyererei
ENSTRUG00000001088	trnt1	99	75.467	ENSPNAG00000000565	trnt1	99	75.467	Pygocentrus_nattereri
ENSTRUG00000001088	trnt1	99	67.059	ENSRNOG00000006432	Trnt1	98	67.059	Rattus_norvegicus
ENSTRUG00000001088	trnt1	95	69.458	ENSRBIG00000042632	TRNT1	93	69.458	Rhinopithecus_bieti
ENSTRUG00000001088	trnt1	95	70.197	ENSRROG00000036866	TRNT1	94	70.197	Rhinopithecus_roxellana
ENSTRUG00000001088	trnt1	99	67.529	ENSSBOG00000021208	TRNT1	98	67.529	Saimiri_boliviensis_boliviensis
ENSTRUG00000001088	trnt1	95	68.227	ENSSHAG00000018861	TRNT1	94	68.227	Sarcophilus_harrisii
ENSTRUG00000001088	trnt1	99	74.884	ENSSFOG00015020844	trnt1	99	74.884	Scleropages_formosus
ENSTRUG00000001088	trnt1	99	82.864	ENSSMAG00000015432	trnt1	98	82.864	Scophthalmus_maximus
ENSTRUG00000001088	trnt1	99	84.272	ENSSDUG00000012320	trnt1	100	84.272	Seriola_dumerili
ENSTRUG00000001088	trnt1	99	84.507	ENSSLDG00000009325	trnt1	100	84.507	Seriola_lalandi_dorsalis
ENSTRUG00000001088	trnt1	56	82.845	ENSSLDG00000016463	-	91	82.845	Seriola_lalandi_dorsalis
ENSTRUG00000001088	trnt1	89	70.681	ENSSPUG00000014153	TRNT1	99	70.681	Sphenodon_punctatus
ENSTRUG00000001088	trnt1	99	81.455	ENSSPAG00000021005	trnt1	99	81.455	Stegastes_partitus
ENSTRUG00000001088	trnt1	99	67.765	ENSSSCG00000011529	TRNT1	98	67.765	Sus_scrofa
ENSTRUG00000001088	trnt1	95	67.079	ENSTGUG00000010192	TRNT1	99	67.079	Taeniopygia_guttata
ENSTRUG00000001088	trnt1	100	90.632	ENSTNIG00000007363	trnt1	98	90.632	Tetraodon_nigroviridis
ENSTRUG00000001088	trnt1	61	60.000	ENSTBEG00000006367	TRNT1	86	60.000	Tupaia_belangeri
ENSTRUG00000001088	trnt1	99	66.824	ENSTTRG00000007803	TRNT1	98	66.824	Tursiops_truncatus
ENSTRUG00000001088	trnt1	99	67.294	ENSUAMG00000022574	TRNT1	97	67.294	Ursus_americanus
ENSTRUG00000001088	trnt1	99	67.294	ENSUMAG00000024092	TRNT1	97	67.294	Ursus_maritimus
ENSTRUG00000001088	trnt1	97	68.182	ENSVVUG00000012810	TRNT1	96	68.182	Vulpes_vulpes
ENSTRUG00000001088	trnt1	97	60.096	ENSXETG00000025091	trnt1	99	60.945	Xenopus_tropicalis
ENSTRUG00000001088	trnt1	99	79.108	ENSXCOG00000010150	trnt1	99	79.108	Xiphophorus_couchianus
ENSTRUG00000001088	trnt1	99	79.577	ENSXMAG00000002227	trnt1	99	79.577	Xiphophorus_maculatus