EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000001231 (Gene tree)
Gene ID: 101064363
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3465 bases
Position: chrHE591952.1:79202-82666
Accession: 101064363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000002860	tRNA_Me_trans	PF03054.16	4.1e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000002877	-	2236	XM_003976424	ENSTRUP00000002860	413 (aa)	XP_003976473	H2RRU4

Gene Model

Click here to download ENSTRUG00000001231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000001231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000001231	trmu	100	69.976	ENSG00000100416	TRMU	96	78.616	Homo_sapiens
ENSTRUG00000001231	trmu	100	85.990	ENSAPOG00000014458	trmu	99	85.990	Acanthochromis_polyacanthus
ENSTRUG00000001231	trmu	97	71.429	ENSAMEG00000003319	TRMU	96	71.429	Ailuropoda_melanoleuca
ENSTRUG00000001231	trmu	100	84.262	ENSACIG00000002101	trmu	99	84.262	Amphilophus_citrinellus
ENSTRUG00000001231	trmu	100	86.232	ENSAOCG00000013155	trmu	99	86.232	Amphiprion_ocellaris
ENSTRUG00000001231	trmu	100	85.990	ENSAPEG00000013350	trmu	99	85.990	Amphiprion_percula
ENSTRUG00000001231	trmu	100	85.714	ENSATEG00000007814	trmu	99	85.714	Anabas_testudineus
ENSTRUG00000001231	trmu	91	71.543	ENSAPLG00000016380	TRMU	96	71.543	Anas_platyrhynchos
ENSTRUG00000001231	trmu	98	69.951	ENSACAG00000007720	TRMU	97	69.951	Anolis_carolinensis
ENSTRUG00000001231	trmu	98	70.471	ENSANAG00000038053	TRMU	95	70.471	Aotus_nancymaae
ENSTRUG00000001231	trmu	100	85.230	ENSACLG00000005395	trmu	98	86.450	Astatotilapia_calliptera
ENSTRUG00000001231	trmu	99	77.184	ENSAMXG00000005282	trmu	99	77.184	Astyanax_mexicanus
ENSTRUG00000001231	trmu	98	70.968	ENSBTAG00000005595	TRMU	97	70.968	Bos_taurus
ENSTRUG00000001231	trmu	92	40.769	WBGene00007114	mttu-1	98	40.769	Caenorhabditis_elegans
ENSTRUG00000001231	trmu	100	68.523	ENSCJAG00000000198	TRMU	98	68.523	Callithrix_jacchus
ENSTRUG00000001231	trmu	98	71.216	ENSCAFG00000000779	TRMU	95	71.216	Canis_familiaris
ENSTRUG00000001231	trmu	98	71.216	ENSCAFG00020009184	TRMU	95	71.216	Canis_lupus_dingo
ENSTRUG00000001231	trmu	99	69.417	ENSCHIG00000017074	TRMU	99	69.417	Capra_hircus
ENSTRUG00000001231	trmu	98	71.712	ENSTSYG00000003853	TRMU	96	71.712	Carlito_syrichta
ENSTRUG00000001231	trmu	94	67.813	ENSCAPG00000013034	TRMU	96	67.813	Cavia_aperea
ENSTRUG00000001231	trmu	98	71.960	ENSCPOG00000020780	TRMU	96	71.960	Cavia_porcellus
ENSTRUG00000001231	trmu	98	69.479	ENSCCAG00000021641	TRMU	96	69.479	Cebus_capucinus
ENSTRUG00000001231	trmu	97	70.175	ENSCATG00000032800	TRMU	95	70.175	Cercocebus_atys
ENSTRUG00000001231	trmu	98	72.208	ENSCLAG00000017269	TRMU	96	72.208	Chinchilla_lanigera
ENSTRUG00000001231	trmu	100	68.765	ENSCSAG00000005279	TRMU	98	68.765	Chlorocebus_sabaeus
ENSTRUG00000001231	trmu	90	73.387	ENSCPBG00000011621	TRMU	93	73.387	Chrysemys_picta_bellii
ENSTRUG00000001231	trmu	95	47.970	ENSCING00000019371	-	96	47.970	Ciona_intestinalis
ENSTRUG00000001231	trmu	98	69.975	ENSCANG00000041645	TRMU	96	69.975	Colobus_angolensis_palliatus
ENSTRUG00000001231	trmu	98	70.720	ENSCGRG00001001739	Trmu	96	70.720	Cricetulus_griseus_chok1gshd
ENSTRUG00000001231	trmu	98	65.509	ENSCGRG00000002781	Trmu	96	65.509	Cricetulus_griseus_crigri
ENSTRUG00000001231	trmu	99	80.583	ENSCSEG00000012382	trmu	99	80.583	Cynoglossus_semilaevis
ENSTRUG00000001231	trmu	100	84.746	ENSCVAG00000001366	trmu	99	84.746	Cyprinodon_variegatus
ENSTRUG00000001231	trmu	100	74.334	ENSDARG00000043734	trmu	99	74.334	Danio_rerio
ENSTRUG00000001231	trmu	63	59.770	ENSDNOG00000047245	-	92	59.770	Dasypus_novemcinctus
ENSTRUG00000001231	trmu	97	72.431	ENSDORG00000007455	Trmu	97	72.431	Dipodomys_ordii
ENSTRUG00000001231	trmu	93	44.041	FBgn0040337	CG3021	95	44.041	Drosophila_melanogaster
ENSTRUG00000001231	trmu	96	56.500	ENSEBUG00000007454	trmu	100	56.772	Eptatretus_burgeri
ENSTRUG00000001231	trmu	98	71.464	ENSEASG00005021725	TRMU	96	71.464	Equus_asinus_asinus
ENSTRUG00000001231	trmu	98	71.464	ENSECAG00000000467	TRMU	95	71.464	Equus_caballus
ENSTRUG00000001231	trmu	69	54.577	ENSEEUG00000000074	-	74	81.481	Erinaceus_europaeus
ENSTRUG00000001231	trmu	99	78.293	ENSELUG00000009464	trmu	99	80.435	Esox_lucius
ENSTRUG00000001231	trmu	97	72.682	ENSFCAG00000006533	TRMU	95	72.682	Felis_catus
ENSTRUG00000001231	trmu	90	70.526	ENSFALG00000010035	TRMU	96	70.526	Ficedula_albicollis
ENSTRUG00000001231	trmu	92	69.895	ENSFDAG00000017472	TRMU	97	69.895	Fukomys_damarensis
ENSTRUG00000001231	trmu	100	83.535	ENSFHEG00000003162	trmu	98	85.286	Fundulus_heteroclitus
ENSTRUG00000001231	trmu	98	73.219	ENSGMOG00000001323	trmu	100	73.219	Gadus_morhua
ENSTRUG00000001231	trmu	96	71.216	ENSGALG00000031922	TRMU	95	71.216	Gallus_gallus
ENSTRUG00000001231	trmu	97	86.070	ENSGAFG00000013331	trmu	96	86.070	Gambusia_affinis
ENSTRUG00000001231	trmu	100	82.857	ENSGACG00000019024	trmu	99	82.857	Gasterosteus_aculeatus
ENSTRUG00000001231	trmu	100	69.976	ENSGGOG00000000203	TRMU	98	69.976	Gorilla_gorilla
ENSTRUG00000001231	trmu	100	84.746	ENSHBUG00000023421	trmu	98	85.908	Haplochromis_burtoni
ENSTRUG00000001231	trmu	97	70.398	ENSHGLG00000009278	TRMU	95	70.398	Heterocephalus_glaber_female
ENSTRUG00000001231	trmu	97	70.398	ENSHGLG00100018863	TRMU	95	70.398	Heterocephalus_glaber_male
ENSTRUG00000001231	trmu	99	85.819	ENSHCOG00000013459	trmu	99	85.819	Hippocampus_comes
ENSTRUG00000001231	trmu	98	80.494	ENSIPUG00000009785	trmu	99	80.494	Ictalurus_punctatus
ENSTRUG00000001231	trmu	98	70.471	ENSSTOG00000010993	TRMU	96	70.471	Ictidomys_tridecemlineatus
ENSTRUG00000001231	trmu	97	70.896	ENSJJAG00000000667	Trmu	96	70.896	Jaculus_jaculus
ENSTRUG00000001231	trmu	100	83.293	ENSKMAG00000008516	trmu	99	83.293	Kryptolebias_marmoratus
ENSTRUG00000001231	trmu	100	85.472	ENSLBEG00000018831	trmu	99	85.472	Labrus_bergylta
ENSTRUG00000001231	trmu	99	74.755	ENSLACG00000013713	TRMU	97	74.755	Latimeria_chalumnae
ENSTRUG00000001231	trmu	97	78.803	ENSLOCG00000016066	trmu	96	78.803	Lepisosteus_oculatus
ENSTRUG00000001231	trmu	98	62.899	ENSLAFG00000005129	TRMU	97	62.899	Loxodonta_africana
ENSTRUG00000001231	trmu	100	68.765	ENSMFAG00000039767	TRMU	98	68.765	Macaca_fascicularis
ENSTRUG00000001231	trmu	100	68.765	ENSMMUG00000000807	TRMU	98	68.765	Macaca_mulatta
ENSTRUG00000001231	trmu	100	68.765	ENSMNEG00000028164	TRMU	98	68.765	Macaca_nemestrina
ENSTRUG00000001231	trmu	97	70.175	ENSMLEG00000033884	TRMU	95	70.175	Mandrillus_leucophaeus
ENSTRUG00000001231	trmu	100	84.504	ENSMAMG00000004717	trmu	99	84.504	Mastacembelus_armatus
ENSTRUG00000001231	trmu	100	85.230	ENSMZEG00005015797	trmu	99	85.230	Maylandia_zebra
ENSTRUG00000001231	trmu	77	70.552	ENSMGAG00000007550	TRMU	95	70.552	Meleagris_gallopavo
ENSTRUG00000001231	trmu	97	70.426	ENSMAUG00000022282	Trmu	96	70.426	Mesocricetus_auratus
ENSTRUG00000001231	trmu	97	71.429	ENSMICG00000029046	TRMU	97	71.429	Microcebus_murinus
ENSTRUG00000001231	trmu	98	70.720	ENSMOCG00000014641	Trmu	97	70.720	Microtus_ochrogaster
ENSTRUG00000001231	trmu	100	82.892	ENSMMOG00000007229	trmu	99	82.892	Mola_mola
ENSTRUG00000001231	trmu	98	66.339	ENSMODG00000007433	TRMU	95	66.339	Monodelphis_domestica
ENSTRUG00000001231	trmu	100	84.504	ENSMALG00000007721	trmu	99	84.504	Monopterus_albus
ENSTRUG00000001231	trmu	98	70.720	MGP_CAROLIEiJ_G0020134	Trmu	97	70.720	Mus_caroli
ENSTRUG00000001231	trmu	98	70.968	ENSMUSG00000022386	Trmu	97	70.968	Mus_musculus
ENSTRUG00000001231	trmu	98	70.471	MGP_PahariEiJ_G0020139	Trmu	97	70.471	Mus_pahari
ENSTRUG00000001231	trmu	98	70.968	MGP_SPRETEiJ_G0021031	Trmu	97	70.968	Mus_spretus
ENSTRUG00000001231	trmu	97	70.927	ENSMPUG00000002523	TRMU	95	70.927	Mustela_putorius_furo
ENSTRUG00000001231	trmu	98	71.216	ENSNGAG00000005132	Trmu	97	71.216	Nannospalax_galili
ENSTRUG00000001231	trmu	100	84.746	ENSNBRG00000022690	trmu	99	85.149	Neolamprologus_brichardi
ENSTRUG00000001231	trmu	98	70.471	ENSNLEG00000015773	TRMU	96	70.471	Nomascus_leucogenys
ENSTRUG00000001231	trmu	79	59.451	ENSMEUG00000000216	TRMU	99	59.451	Notamacropus_eugenii
ENSTRUG00000001231	trmu	98	71.464	ENSODEG00000014745	TRMU	97	71.111	Octodon_degus
ENSTRUG00000001231	trmu	100	84.988	ENSONIG00000009821	trmu	99	84.988	Oreochromis_niloticus
ENSTRUG00000001231	trmu	93	65.722	ENSOANG00000001891	TRMU	98	65.722	Ornithorhynchus_anatinus
ENSTRUG00000001231	trmu	91	70.479	ENSOCUG00000003664	TRMU	94	69.289	Oryctolagus_cuniculus
ENSTRUG00000001231	trmu	99	80.825	ENSORLG00000019015	trmu	99	80.825	Oryzias_latipes
ENSTRUG00000001231	trmu	99	80.825	ENSORLG00020006830	trmu	99	80.825	Oryzias_latipes_hni
ENSTRUG00000001231	trmu	99	80.825	ENSORLG00015003907	trmu	99	80.825	Oryzias_latipes_hsok
ENSTRUG00000001231	trmu	58	80.833	ENSOMEG00000015541	trmu	87	80.833	Oryzias_melastigma
ENSTRUG00000001231	trmu	98	69.975	ENSOGAG00000008096	TRMU	97	69.975	Otolemur_garnettii
ENSTRUG00000001231	trmu	92	68.947	ENSOARG00000019475	TRMU	93	68.947	Ovis_aries
ENSTRUG00000001231	trmu	100	69.976	ENSPPAG00000033944	TRMU	98	69.976	Pan_paniscus
ENSTRUG00000001231	trmu	97	72.180	ENSPPRG00000004197	TRMU	95	72.180	Panthera_pardus
ENSTRUG00000001231	trmu	67	72.202	ENSPTIG00000014122	TRMU	97	73.864	Panthera_tigris_altaica
ENSTRUG00000001231	trmu	100	69.976	ENSPTRG00000014510	TRMU	98	69.976	Pan_troglodytes
ENSTRUG00000001231	trmu	96	70.380	ENSPANG00000023074	TRMU	97	67.945	Papio_anubis
ENSTRUG00000001231	trmu	99	76.214	ENSPKIG00000002849	trmu	99	76.214	Paramormyrops_kingsleyae
ENSTRUG00000001231	trmu	92	71.579	ENSPSIG00000013020	TRMU	99	71.579	Pelodiscus_sinensis
ENSTRUG00000001231	trmu	99	81.995	ENSPMGG00000004083	trmu	99	81.995	Periophthalmus_magnuspinnatus
ENSTRUG00000001231	trmu	97	71.178	ENSPEMG00000014007	Trmu	96	71.178	Peromyscus_maniculatus_bairdii
ENSTRUG00000001231	trmu	95	68.448	ENSPCIG00000009923	TRMU	93	68.262	Phascolarctos_cinereus
ENSTRUG00000001231	trmu	98	79.653	ENSPFOG00000008197	trmu	90	79.653	Poecilia_formosa
ENSTRUG00000001231	trmu	100	83.293	ENSPLAG00000008414	trmu	99	83.293	Poecilia_latipinna
ENSTRUG00000001231	trmu	100	83.535	ENSPMEG00000004326	trmu	99	83.535	Poecilia_mexicana
ENSTRUG00000001231	trmu	100	83.535	ENSPREG00000007980	trmu	99	83.535	Poecilia_reticulata
ENSTRUG00000001231	trmu	98	71.216	ENSPPYG00000011949	TRMU	96	71.216	Pongo_abelii
ENSTRUG00000001231	trmu	91	63.564	ENSPCAG00000013462	TRMU	97	63.564	Procavia_capensis
ENSTRUG00000001231	trmu	98	70.471	ENSPCOG00000016539	TRMU	97	70.471	Propithecus_coquereli
ENSTRUG00000001231	trmu	97	65.414	ENSPVAG00000013202	TRMU	96	65.414	Pteropus_vampyrus
ENSTRUG00000001231	trmu	100	84.746	ENSPNYG00000005629	trmu	99	84.746	Pundamilia_nyererei
ENSTRUG00000001231	trmu	99	77.995	ENSPNAG00000006339	trmu	96	77.995	Pygocentrus_nattereri
ENSTRUG00000001231	trmu	98	69.975	ENSRNOG00000016465	Trmu	97	69.975	Rattus_norvegicus
ENSTRUG00000001231	trmu	100	68.039	ENSRBIG00000038973	TRMU	98	68.039	Rhinopithecus_bieti
ENSTRUG00000001231	trmu	100	68.281	ENSRROG00000004267	TRMU	98	68.281	Rhinopithecus_roxellana
ENSTRUG00000001231	trmu	92	32.338	YDL033C	SLM3	91	32.338	Saccharomyces_cerevisiae
ENSTRUG00000001231	trmu	100	68.765	ENSSBOG00000030184	TRMU	98	68.765	Saimiri_boliviensis_boliviensis
ENSTRUG00000001231	trmu	89	75.881	ENSSFOG00015020664	trmu	97	75.881	Scleropages_formosus
ENSTRUG00000001231	trmu	100	84.262	ENSSMAG00000019450	trmu	99	84.262	Scophthalmus_maximus
ENSTRUG00000001231	trmu	100	86.925	ENSSDUG00000011913	trmu	99	86.925	Seriola_dumerili
ENSTRUG00000001231	trmu	100	86.683	ENSSLDG00000011684	trmu	99	86.683	Seriola_lalandi_dorsalis
ENSTRUG00000001231	trmu	96	62.785	ENSSPUG00000017123	TRMU	93	62.785	Sphenodon_punctatus
ENSTRUG00000001231	trmu	100	82.809	ENSSPAG00000021875	trmu	99	82.809	Stegastes_partitus
ENSTRUG00000001231	trmu	98	71.464	ENSSSCG00000000007	TRMU	96	71.464	Sus_scrofa
ENSTRUG00000001231	trmu	90	71.850	ENSTGUG00000003663	-	100	71.850	Taeniopygia_guttata
ENSTRUG00000001231	trmu	100	90.843	ENSTNIG00000010484	trmu	98	90.843	Tetraodon_nigroviridis
ENSTRUG00000001231	trmu	72	55.000	ENSTBEG00000011276	-	77	55.000	Tupaia_belangeri
ENSTRUG00000001231	trmu	97	72.431	ENSTTRG00000004160	TRMU	95	72.431	Tursiops_truncatus
ENSTRUG00000001231	trmu	71	73.220	ENSUAMG00000024825	TRMU	98	73.220	Ursus_americanus
ENSTRUG00000001231	trmu	96	60.759	ENSUMAG00000019079	TRMU	97	73.541	Ursus_maritimus
ENSTRUG00000001231	trmu	53	63.927	ENSVPAG00000000685	-	100	63.927	Vicugna_pacos
ENSTRUG00000001231	trmu	97	70.927	ENSVVUG00000024963	TRMU	95	70.927	Vulpes_vulpes
ENSTRUG00000001231	trmu	99	73.659	ENSXETG00000023304	trmu	96	73.659	Xenopus_tropicalis
ENSTRUG00000001231	trmu	97	84.198	ENSXCOG00000015105	trmu	97	84.198	Xiphophorus_couchianus
ENSTRUG00000001231	trmu	97	86.567	ENSXMAG00000006697	trmu	97	86.567	Xiphophorus_maculatus