EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000001268 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 33542 bases
Position: chrHE591735.1:276776-310317
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	1	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	2	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	3	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	4	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	5	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	6	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	7	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	8	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	9	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	10	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	11	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	12	13
ENSTRUP00000007283	zf-C2H2	PF00096.26	6e-77	13	13
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	1	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	2	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	3	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	4	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	5	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	6	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	7	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	8	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	9	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	10	11
ENSTRUP00000012133	zf-C2H2	PF00096.26	7.6e-67	11	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	1	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	2	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	3	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	4	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	5	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	6	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	7	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	8	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	9	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	10	11
ENSTRUP00000012423	zf-C2H2	PF00096.26	2e-64	11	11
ENSTRUP00000052420	zf-C2H2	PF00096.26	2.1e-44	1	7
ENSTRUP00000052420	zf-C2H2	PF00096.26	2.1e-44	2	7
ENSTRUP00000052420	zf-C2H2	PF00096.26	2.1e-44	3	7
ENSTRUP00000052420	zf-C2H2	PF00096.26	2.1e-44	4	7
ENSTRUP00000052420	zf-C2H2	PF00096.26	2.1e-44	5	7
ENSTRUP00000052420	zf-C2H2	PF00096.26	2.1e-44	6	7
ENSTRUP00000052420	zf-C2H2	PF00096.26	2.1e-44	7	7
ENSTRUP00000007282	zf-C2H2	PF00096.26	2e-43	1	7
ENSTRUP00000007282	zf-C2H2	PF00096.26	2e-43	2	7
ENSTRUP00000007282	zf-C2H2	PF00096.26	2e-43	3	7
ENSTRUP00000007282	zf-C2H2	PF00096.26	2e-43	4	7
ENSTRUP00000007282	zf-C2H2	PF00096.26	2e-43	5	7
ENSTRUP00000007282	zf-C2H2	PF00096.26	2e-43	6	7
ENSTRUP00000007282	zf-C2H2	PF00096.26	2e-43	7	7
ENSTRUP00000007283	zf-met	PF12874.7	4.9e-16	1	1
ENSTRUP00000012133	zf-met	PF12874.7	5.5e-16	1	1
ENSTRUP00000012423	zf-met	PF12874.7	3.8e-15	1	1
ENSTRUP00000007282	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012483	-	1287	-	ENSTRUP00000012423	428 (aa)	-	H2SJ40
ENSTRUT00000012193	-	1125	-	ENSTRUP00000012133	374 (aa)	-	H2SIA1
ENSTRUT00000052953	-	1834	-	ENSTRUP00000052420	518 (aa)	-	-
ENSTRUT00000007327	-	810	-	ENSTRUP00000007282	269 (aa)	-	H2S4G0
ENSTRUT00000007328	-	1434	-	ENSTRUP00000007283	477 (aa)	-	H2S4G1

Gene Model

Click here to download ENSTRUG00000001268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000001268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000001268	-	91	64.103	ENSTRUG00000022919	-	97	65.084
ENSTRUG00000001268	-	86	50.000	ENSTRUG00000003369	sall3b	56	43.750
ENSTRUG00000001268	-	97	40.058	ENSTRUG00000022843	-	68	45.070
ENSTRUG00000001268	-	86	76.510	ENSTRUG00000022515	-	100	76.510
ENSTRUG00000001268	-	95	53.185	ENSTRUG00000012273	-	99	47.191
ENSTRUG00000001268	-	95	57.627	ENSTRUG00000020208	-	97	61.818
ENSTRUG00000001268	-	90	43.564	ENSTRUG00000025588	snai2	75	40.157
ENSTRUG00000001268	-	95	40.798	ENSTRUG00000022666	-	57	43.750
ENSTRUG00000001268	-	97	38.710	ENSTRUG00000020495	si:dkey-89b17.4	90	38.710
ENSTRUG00000001268	-	91	62.963	ENSTRUG00000005180	-	87	68.617
ENSTRUG00000001268	-	88	43.671	ENSTRUG00000013850	prdm5	76	43.671
ENSTRUG00000001268	-	97	66.205	ENSTRUG00000023925	-	96	73.286
ENSTRUG00000001268	-	89	48.400	ENSTRUG00000019940	-	52	48.249
ENSTRUG00000001268	-	90	42.453	ENSTRUG00000019685	znf319b	87	41.576
ENSTRUG00000001268	-	97	69.643	ENSTRUG00000025189	-	86	69.643
ENSTRUG00000001268	-	97	36.000	ENSTRUG00000014476	-	89	38.060
ENSTRUG00000001268	-	91	48.780	ENSTRUG00000003277	zbtb17	93	48.780
ENSTRUG00000001268	-	95	52.542	ENSTRUG00000022969	-	72	57.895
ENSTRUG00000001268	-	91	41.176	ENSTRUG00000012157	-	91	42.120
ENSTRUG00000001268	-	97	62.994	ENSTRUG00000013906	-	95	66.667
ENSTRUG00000001268	-	89	45.238	ENSTRUG00000025881	-	72	45.238
ENSTRUG00000001268	-	93	41.739	ENSTRUG00000000419	sna2	88	41.739
ENSTRUG00000001268	-	91	38.924	ENSTRUG00000003454	-	71	38.529
ENSTRUG00000001268	-	91	46.847	ENSTRUG00000022391	-	54	46.847
ENSTRUG00000001268	-	78	42.029	ENSTRUG00000001452	PRDM15	53	42.029
ENSTRUG00000001268	-	93	43.275	ENSTRUG00000023491	-	74	43.976
ENSTRUG00000001268	-	96	43.382	ENSTRUG00000004525	gfi1b	61	43.382
ENSTRUG00000001268	-	97	72.495	ENSTRUG00000000995	-	100	72.495
ENSTRUG00000001268	-	77	33.582	ENSTRUG00000019941	-	58	32.447
ENSTRUG00000001268	-	98	52.688	ENSTRUG00000006896	-	85	52.688
ENSTRUG00000001268	-	91	37.838	ENSTRUG00000016405	znf652	50	41.304
ENSTRUG00000001268	-	88	33.613	ENSTRUG00000005241	gtf3ab	85	35.537
ENSTRUG00000001268	-	95	46.809	ENSTRUG00000004140	ZBTB14	66	45.802
ENSTRUG00000001268	-	98	69.312	ENSTRUG00000021765	-	100	72.102
ENSTRUG00000001268	-	96	46.632	ENSTRUG00000022076	-	95	46.632
ENSTRUG00000001268	-	94	39.604	ENSTRUG00000012719	-	54	38.060
ENSTRUG00000001268	-	89	42.105	ENSTRUG00000008615	zbtb48	75	40.099
ENSTRUG00000001268	-	93	37.884	ENSTRUG00000009203	zbtb41	56	36.441
ENSTRUG00000001268	-	94	38.739	ENSTRUG00000011637	scrt1b	57	35.455
ENSTRUG00000001268	-	97	45.528	ENSTRUG00000024073	-	76	42.140
ENSTRUG00000001268	-	96	45.342	ENSTRUG00000022066	-	90	45.342
ENSTRUG00000001268	-	94	35.338	ENSTRUG00000025597	znf646	87	35.338
ENSTRUG00000001268	-	97	42.991	ENSTRUG00000021675	-	93	46.479
ENSTRUG00000001268	-	98	46.067	ENSTRUG00000015687	-	93	49.020
ENSTRUG00000001268	-	94	38.000	ENSTRUG00000007620	scrt2	51	36.364
ENSTRUG00000001268	-	94	50.901	ENSTRUG00000020582	-	95	49.787
ENSTRUG00000001268	-	98	81.765	ENSTRUG00000022206	-	100	81.766
ENSTRUG00000001268	-	98	51.807	ENSTRUG00000019483	-	100	50.909
ENSTRUG00000001268	-	93	44.643	ENSTRUG00000004744	gfi1aa	57	44.643
ENSTRUG00000001268	-	89	43.333	ENSTRUG00000021167	-	99	39.326
ENSTRUG00000001268	-	100	44.444	ENSTRUG00000024009	-	100	44.444
ENSTRUG00000001268	-	90	41.463	ENSTRUG00000024008	-	65	33.929
ENSTRUG00000001268	-	95	47.368	ENSTRUG00000017456	znf236	75	47.368
ENSTRUG00000001268	-	93	42.162	ENSTRUG00000005321	-	99	43.043
ENSTRUG00000001268	-	94	39.604	ENSTRUG00000019558	-	53	40.000
ENSTRUG00000001268	-	89	75.439	ENSTRUG00000003111	-	97	64.979
ENSTRUG00000001268	-	97	65.476	ENSTRUG00000007022	-	91	63.924
ENSTRUG00000001268	-	94	32.093	ENSTRUG00000011385	znf341	57	35.443
ENSTRUG00000001268	-	91	39.860	ENSTRUG00000015366	patz1	74	36.126
ENSTRUG00000001268	-	91	36.232	ENSTRUG00000005880	-	54	45.517
ENSTRUG00000001268	-	93	35.366	ENSTRUG00000006180	si:ch211-216l23.1	96	35.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000001268	-	95	53.465	ENSAPOG00000005767	-	100	55.319	Acanthochromis_polyacanthus
ENSTRUG00000001268	-	98	55.789	ENSAOCG00000000570	-	96	55.789	Amphiprion_ocellaris
ENSTRUG00000001268	-	91	49.239	ENSAPEG00000018796	-	92	48.684	Amphiprion_percula
ENSTRUG00000001268	-	97	38.732	ENSCVAG00000018507	-	94	36.735	Cyprinodon_variegatus
ENSTRUG00000001268	-	98	41.844	ENSFHEG00000022534	-	91	39.785	Fundulus_heteroclitus
ENSTRUG00000001268	-	95	41.618	ENSHCOG00000013972	-	55	41.088	Hippocampus_comes
ENSTRUG00000001268	-	95	48.980	ENSKMAG00000013745	-	87	48.889	Kryptolebias_marmoratus
ENSTRUG00000001268	-	96	40.532	ENSMAMG00000009817	-	79	44.262	Mastacembelus_armatus
ENSTRUG00000001268	-	95	55.977	ENSMAMG00000018114	-	94	54.187	Mastacembelus_armatus
ENSTRUG00000001268	-	95	52.869	ENSMZEG00005016808	-	96	54.959	Maylandia_zebra
ENSTRUG00000001268	-	94	61.963	ENSMALG00000004579	-	97	64.327	Monopterus_albus
ENSTRUG00000001268	-	94	56.592	ENSMALG00000001085	-	93	56.592	Monopterus_albus
ENSTRUG00000001268	-	94	58.621	ENSMALG00000012757	-	91	59.783	Monopterus_albus
ENSTRUG00000001268	-	91	55.779	ENSMALG00000012116	-	99	58.553	Monopterus_albus
ENSTRUG00000001268	-	97	51.240	ENSMALG00000008930	-	99	51.240	Monopterus_albus
ENSTRUG00000001268	-	94	50.000	ENSNBRG00000013501	-	97	50.265	Neolamprologus_brichardi
ENSTRUG00000001268	-	97	40.181	ENSOMEG00000021420	-	67	47.059	Oryzias_melastigma
ENSTRUG00000001268	-	97	35.542	ENSPREG00000014898	-	68	40.678	Poecilia_reticulata
ENSTRUG00000001268	-	96	46.341	ENSPNYG00000007756	-	86	46.196	Pundamilia_nyererei
ENSTRUG00000001268	-	96	41.558	ENSSMAG00000017494	-	55	45.575	Scophthalmus_maximus
ENSTRUG00000001268	-	87	51.701	ENSSDUG00000001263	-	96	48.469	Seriola_dumerili
ENSTRUG00000001268	-	96	40.909	ENSSLDG00000023661	-	84	42.925	Seriola_lalandi_dorsalis
ENSTRUG00000001268	-	98	55.263	ENSTNIG00000005856	-	99	56.270	Tetraodon_nigroviridis
ENSTRUG00000001268	-	91	55.789	ENSXCOG00000019492	-	94	55.789	Xiphophorus_couchianus
ENSTRUG00000001268	-	95	47.872	ENSXMAG00000022297	-	99	53.165	Xiphophorus_maculatus