EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000001307 (Gene tree)
Gene ID: 101078349
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 13171 bases
Position: chrHE591722.1:101482-114652
Accession: 101078349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000003016	ResIII	PF04851.15	6e-26	1	2
ENSTRUP00000003016	ResIII	PF04851.15	6e-26	2	2
ENSTRUP00000055857	ResIII	PF04851.15	3.2e-12	1	1
ENSTRUP00000003016	DEAD	PF00270.29	1.7e-52	1	2
ENSTRUP00000003016	DEAD	PF00270.29	1.7e-52	2	2
ENSTRUP00000055857	DEAD	PF00270.29	2.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057745	-	2079	-	ENSTRUP00000055857	692 (aa)	-	-
ENSTRUT00000003034	-	8748	XM_003977397	ENSTRUP00000003016	2136 (aa)	XP_003977446	H2RSA0

Gene Model

Click here to download ENSTRUG00000001307's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000001307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000001307	snrnp200	99	90.309	ENSG00000144028	SNRNP200	99	90.971	Homo_sapiens
ENSTRUG00000001307	snrnp200	100	97.191	ENSAPOG00000010223	snrnp200	100	97.191	Acanthochromis_polyacanthus
ENSTRUG00000001307	snrnp200	99	90.356	ENSAMEG00000008996	SNRNP200	99	90.465	Ailuropoda_melanoleuca
ENSTRUG00000001307	snrnp200	97	96.249	ENSACIG00000001764	snrnp200	98	96.249	Amphilophus_citrinellus
ENSTRUG00000001307	snrnp200	100	96.957	ENSAOCG00000024593	snrnp200	100	96.957	Amphiprion_ocellaris
ENSTRUG00000001307	snrnp200	97	96.195	ENSAPEG00000012554	snrnp200	100	96.195	Amphiprion_percula
ENSTRUG00000001307	snrnp200	100	97.097	ENSATEG00000022522	snrnp200	100	97.097	Anabas_testudineus
ENSTRUG00000001307	snrnp200	99	90.476	ENSAPLG00000004313	SNRNP200	99	90.539	Anas_platyrhynchos
ENSTRUG00000001307	snrnp200	99	89.523	ENSACAG00000000434	SNRNP200	100	89.523	Anolis_carolinensis
ENSTRUG00000001307	snrnp200	99	87.529	ENSANAG00000036625	SNRNP200	99	87.629	Aotus_nancymaae
ENSTRUG00000001307	snrnp200	100	96.489	ENSACLG00000011188	snrnp200	100	96.489	Astatotilapia_calliptera
ENSTRUG00000001307	snrnp200	99	94.123	ENSAMXG00000005684	snrnp200	99	94.123	Astyanax_mexicanus
ENSTRUG00000001307	snrnp200	99	90.215	ENSBTAG00000000848	SNRNP200	99	90.324	Bos_taurus
ENSTRUG00000001307	snrnp200	99	90.262	ENSCJAG00000007514	SNRNP200	99	90.371	Callithrix_jacchus
ENSTRUG00000001307	snrnp200	99	89.594	ENSCAFG00020019979	SNRNP200	99	91.623	Canis_lupus_dingo
ENSTRUG00000001307	snrnp200	99	90.169	ENSCHIG00000020611	SNRNP200	99	90.277	Capra_hircus
ENSTRUG00000001307	snrnp200	99	90.356	ENSTSYG00000010467	SNRNP200	99	90.465	Carlito_syrichta
ENSTRUG00000001307	snrnp200	99	89.845	ENSCAPG00000017234	SNRNP200	99	89.953	Cavia_aperea
ENSTRUG00000001307	snrnp200	99	90.169	ENSCPOG00000006776	SNRNP200	99	90.277	Cavia_porcellus
ENSTRUG00000001307	snrnp200	99	90.262	ENSCCAG00000033962	SNRNP200	99	90.371	Cebus_capucinus
ENSTRUG00000001307	snrnp200	99	90.309	ENSCATG00000015790	SNRNP200	99	90.418	Cercocebus_atys
ENSTRUG00000001307	snrnp200	99	90.215	ENSCLAG00000004116	SNRNP200	99	90.324	Chinchilla_lanigera
ENSTRUG00000001307	snrnp200	99	90.356	ENSCSAG00000017369	SNRNP200	99	90.465	Chlorocebus_sabaeus
ENSTRUG00000001307	snrnp200	73	92.415	ENSCHOG00000012981	-	58	92.415	Choloepus_hoffmanni
ENSTRUG00000001307	snrnp200	99	90.323	ENSCPBG00000022571	SNRNP200	99	92.500	Chrysemys_picta_bellii
ENSTRUG00000001307	snrnp200	99	75.595	ENSCING00000005082	-	99	75.831	Ciona_intestinalis
ENSTRUG00000001307	snrnp200	94	90.095	ENSCANG00000033932	SNRNP200	99	90.210	Colobus_angolensis_palliatus
ENSTRUG00000001307	snrnp200	99	90.309	ENSCGRG00001022610	Snrnp200	99	90.418	Cricetulus_griseus_chok1gshd
ENSTRUG00000001307	snrnp200	99	89.808	ENSCGRG00000016472	Snrnp200	99	89.916	Cricetulus_griseus_crigri
ENSTRUG00000001307	snrnp200	99	95.173	ENSCSEG00000016399	snrnp200	99	95.296	Cynoglossus_semilaevis
ENSTRUG00000001307	snrnp200	100	90.871	ENSCVAG00000017631	snrnp200	100	90.871	Cyprinodon_variegatus
ENSTRUG00000001307	snrnp200	100	93.867	ENSDARG00000077536	snrnp200	99	93.888	Danio_rerio
ENSTRUG00000001307	snrnp200	99	88.998	ENSDNOG00000011227	SNRNP200	99	89.103	Dasypus_novemcinctus
ENSTRUG00000001307	snrnp200	99	87.850	ENSDORG00000005861	Snrnp200	99	87.951	Dipodomys_ordii
ENSTRUG00000001307	snrnp200	100	73.557	FBgn0263599	l(3)72Ab	99	73.783	Drosophila_melanogaster
ENSTRUG00000001307	snrnp200	99	87.234	ENSETEG00000000162	SNRNP200	74	89.406	Echinops_telfairi
ENSTRUG00000001307	snrnp200	83	80.807	ENSEBUG00000016524	snrnp200	95	80.807	Eptatretus_burgeri
ENSTRUG00000001307	snrnp200	99	89.324	ENSEASG00005001884	SNRNP200	99	89.336	Equus_asinus_asinus
ENSTRUG00000001307	snrnp200	99	90.356	ENSECAG00000019675	SNRNP200	99	90.465	Equus_caballus
ENSTRUG00000001307	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSTRUG00000001307	snrnp200	99	95.630	ENSELUG00000018948	snrnp200	99	95.630	Esox_lucius
ENSTRUG00000001307	snrnp200	99	90.403	ENSFCAG00000010699	SNRNP200	99	90.512	Felis_catus
ENSTRUG00000001307	snrnp200	93	84.821	ENSFALG00000001368	-	94	84.821	Ficedula_albicollis
ENSTRUG00000001307	snrnp200	99	90.122	ENSFDAG00000004683	SNRNP200	99	90.230	Fukomys_damarensis
ENSTRUG00000001307	snrnp200	100	93.399	ENSFHEG00000003786	snrnp200	100	93.399	Fundulus_heteroclitus
ENSTRUG00000001307	snrnp200	100	94.486	ENSGMOG00000004881	snrnp200	99	94.369	Gadus_morhua
ENSTRUG00000001307	snrnp200	100	93.399	ENSGAFG00000010807	snrnp200	100	93.399	Gambusia_affinis
ENSTRUG00000001307	snrnp200	100	96.123	ENSGACG00000011474	snrnp200	99	96.123	Gasterosteus_aculeatus
ENSTRUG00000001307	snrnp200	95	92.570	ENSGAGG00000016069	SNRNP200	97	96.774	Gopherus_agassizii
ENSTRUG00000001307	snrnp200	99	90.309	ENSGGOG00000005174	SNRNP200	99	90.418	Gorilla_gorilla
ENSTRUG00000001307	snrnp200	97	93.643	ENSHBUG00000011322	snrnp200	99	93.693	Haplochromis_burtoni
ENSTRUG00000001307	snrnp200	99	90.169	ENSHGLG00000006654	SNRNP200	99	90.277	Heterocephalus_glaber_female
ENSTRUG00000001307	snrnp200	99	90.169	ENSHGLG00100018594	SNRNP200	99	90.277	Heterocephalus_glaber_male
ENSTRUG00000001307	snrnp200	50	87.572	ENSIPUG00000007770	-	89	87.647	Ictalurus_punctatus
ENSTRUG00000001307	snrnp200	99	90.356	ENSSTOG00000016351	SNRNP200	99	90.465	Ictidomys_tridecemlineatus
ENSTRUG00000001307	snrnp200	99	90.075	ENSJJAG00000023659	Snrnp200	99	90.183	Jaculus_jaculus
ENSTRUG00000001307	snrnp200	100	93.654	ENSKMAG00000003665	snrnp200	100	93.654	Kryptolebias_marmoratus
ENSTRUG00000001307	snrnp200	100	96.536	ENSLBEG00000021585	snrnp200	100	96.536	Labrus_bergylta
ENSTRUG00000001307	snrnp200	82	91.920	ENSLACG00000000226	SNRNP200	99	92.051	Latimeria_chalumnae
ENSTRUG00000001307	snrnp200	100	93.639	ENSLOCG00000015198	snrnp200	99	93.659	Lepisosteus_oculatus
ENSTRUG00000001307	snrnp200	99	90.215	ENSLAFG00000015626	SNRNP200	99	90.324	Loxodonta_africana
ENSTRUG00000001307	snrnp200	99	90.262	ENSMFAG00000040174	SNRNP200	99	91.279	Macaca_fascicularis
ENSTRUG00000001307	snrnp200	99	90.262	ENSMMUG00000023261	SNRNP200	99	90.371	Macaca_mulatta
ENSTRUG00000001307	snrnp200	99	90.215	ENSMNEG00000032398	SNRNP200	99	90.324	Macaca_nemestrina
ENSTRUG00000001307	snrnp200	99	90.309	ENSMLEG00000019083	SNRNP200	99	91.279	Mandrillus_leucophaeus
ENSTRUG00000001307	snrnp200	100	96.397	ENSMAMG00000007851	snrnp200	100	96.397	Mastacembelus_armatus
ENSTRUG00000001307	snrnp200	97	93.643	ENSMZEG00005010787	snrnp200	99	93.693	Maylandia_zebra
ENSTRUG00000001307	snrnp200	97	90.131	ENSMGAG00000001831	SNRNP200	99	90.249	Meleagris_gallopavo
ENSTRUG00000001307	snrnp200	99	90.356	ENSMAUG00000011825	Snrnp200	99	90.465	Mesocricetus_auratus
ENSTRUG00000001307	snrnp200	99	90.356	ENSMICG00000004710	SNRNP200	99	90.465	Microcebus_murinus
ENSTRUG00000001307	snrnp200	99	88.530	ENSMOCG00000011814	Snrnp200	99	88.633	Microtus_ochrogaster
ENSTRUG00000001307	snrnp200	99	95.356	ENSMMOG00000014167	snrnp200	99	94.781	Mola_mola
ENSTRUG00000001307	snrnp200	99	90.262	ENSMODG00000008475	SNRNP200	99	90.324	Monodelphis_domestica
ENSTRUG00000001307	snrnp200	100	96.723	ENSMALG00000001973	snrnp200	100	96.723	Monopterus_albus
ENSTRUG00000001307	snrnp200	99	90.215	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.324	Mus_caroli
ENSTRUG00000001307	snrnp200	99	90.262	ENSMUSG00000003660	Snrnp200	99	90.371	Mus_musculus
ENSTRUG00000001307	snrnp200	99	90.262	MGP_PahariEiJ_G0025695	Snrnp200	99	90.371	Mus_pahari
ENSTRUG00000001307	snrnp200	99	90.262	MGP_SPRETEiJ_G0025170	Snrnp200	99	92.958	Mus_spretus
ENSTRUG00000001307	snrnp200	99	90.403	ENSMPUG00000008949	SNRNP200	99	90.512	Mustela_putorius_furo
ENSTRUG00000001307	snrnp200	99	89.855	ENSMLUG00000010493	SNRNP200	99	89.962	Myotis_lucifugus
ENSTRUG00000001307	snrnp200	99	87.125	ENSMLUG00000027511	-	99	87.224	Myotis_lucifugus
ENSTRUG00000001307	snrnp200	99	90.309	ENSNGAG00000021993	Snrnp200	99	90.418	Nannospalax_galili
ENSTRUG00000001307	snrnp200	90	96.111	ENSNBRG00000017960	snrnp200	98	96.167	Neolamprologus_brichardi
ENSTRUG00000001307	snrnp200	99	86.053	ENSNLEG00000000025	SNRNP200	99	86.194	Nomascus_leucogenys
ENSTRUG00000001307	snrnp200	99	93.814	ENSMEUG00000010532	SNRNP200	78	92.857	Notamacropus_eugenii
ENSTRUG00000001307	snrnp200	96	89.202	ENSOPRG00000015464	SNRNP200	99	87.130	Ochotona_princeps
ENSTRUG00000001307	snrnp200	99	90.169	ENSODEG00000008366	SNRNP200	99	90.277	Octodon_degus
ENSTRUG00000001307	snrnp200	100	96.489	ENSONIG00000010714	snrnp200	100	96.489	Oreochromis_niloticus
ENSTRUG00000001307	snrnp200	99	90.262	ENSOCUG00000009864	SNRNP200	99	90.371	Oryctolagus_cuniculus
ENSTRUG00000001307	snrnp200	99	95.314	ENSORLG00000012286	snrnp200	99	95.401	Oryzias_latipes
ENSTRUG00000001307	snrnp200	99	95.408	ENSORLG00020004648	snrnp200	99	95.440	Oryzias_latipes_hni
ENSTRUG00000001307	snrnp200	99	95.455	ENSORLG00015019114	snrnp200	99	95.487	Oryzias_latipes_hsok
ENSTRUG00000001307	snrnp200	99	95.581	ENSOMEG00000011834	snrnp200	99	95.581	Oryzias_melastigma
ENSTRUG00000001307	snrnp200	99	90.356	ENSOGAG00000006879	SNRNP200	99	90.465	Otolemur_garnettii
ENSTRUG00000001307	snrnp200	99	89.471	ENSOARG00000013949	SNRNP200	99	89.577	Ovis_aries
ENSTRUG00000001307	snrnp200	99	90.309	ENSPPAG00000041559	SNRNP200	99	90.418	Pan_paniscus
ENSTRUG00000001307	snrnp200	99	90.403	ENSPPRG00000004435	SNRNP200	99	90.512	Panthera_pardus
ENSTRUG00000001307	snrnp200	99	89.981	ENSPTIG00000006380	SNRNP200	99	90.089	Panthera_tigris_altaica
ENSTRUG00000001307	snrnp200	99	90.309	ENSPTRG00000012230	SNRNP200	99	90.418	Pan_troglodytes
ENSTRUG00000001307	snrnp200	99	90.262	ENSPANG00000006017	SNRNP200	99	90.371	Papio_anubis
ENSTRUG00000001307	snrnp200	100	94.806	ENSPKIG00000014762	snrnp200	99	94.914	Paramormyrops_kingsleyae
ENSTRUG00000001307	snrnp200	99	89.424	ENSPSIG00000008580	SNRNP200	99	89.484	Pelodiscus_sinensis
ENSTRUG00000001307	snrnp200	99	85.405	ENSPEMG00000020700	-	99	96.429	Peromyscus_maniculatus_bairdii
ENSTRUG00000001307	snrnp200	99	90.169	ENSPCIG00000023050	SNRNP200	99	90.230	Phascolarctos_cinereus
ENSTRUG00000001307	snrnp200	100	95.882	ENSPFOG00000015110	snrnp200	99	95.959	Poecilia_formosa
ENSTRUG00000001307	snrnp200	97	95.985	ENSPLAG00000006711	snrnp200	99	95.985	Poecilia_latipinna
ENSTRUG00000001307	snrnp200	97	95.875	ENSPMEG00000021166	snrnp200	99	95.875	Poecilia_mexicana
ENSTRUG00000001307	snrnp200	100	95.880	ENSPREG00000008875	snrnp200	99	95.957	Poecilia_reticulata
ENSTRUG00000001307	snrnp200	99	90.309	ENSPPYG00000012068	SNRNP200	99	90.418	Pongo_abelii
ENSTRUG00000001307	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	85	95.745	Procavia_capensis
ENSTRUG00000001307	snrnp200	99	90.309	ENSPCOG00000024608	SNRNP200	99	90.418	Propithecus_coquereli
ENSTRUG00000001307	snrnp200	96	90.993	ENSPVAG00000005860	SNRNP200	92	91.237	Pteropus_vampyrus
ENSTRUG00000001307	snrnp200	100	91.783	ENSPNYG00000017476	snrnp200	100	91.783	Pundamilia_nyererei
ENSTRUG00000001307	snrnp200	100	90.033	ENSPNAG00000010998	snrnp200	99	90.085	Pygocentrus_nattereri
ENSTRUG00000001307	snrnp200	99	90.356	ENSRNOG00000012157	Snrnp200	99	90.465	Rattus_norvegicus
ENSTRUG00000001307	snrnp200	99	90.309	ENSRBIG00000044690	-	99	90.418	Rhinopithecus_bieti
ENSTRUG00000001307	snrnp200	99	90.309	ENSRROG00000037952	-	99	90.418	Rhinopithecus_roxellana
ENSTRUG00000001307	snrnp200	99	90.262	ENSSBOG00000035471	SNRNP200	99	90.371	Saimiri_boliviensis_boliviensis
ENSTRUG00000001307	snrnp200	97	90.034	ENSSHAG00000000758	SNRNP200	99	90.102	Sarcophilus_harrisii
ENSTRUG00000001307	snrnp200	99	94.737	ENSSFOG00015018826	snrnp200	99	94.737	Scleropages_formosus
ENSTRUG00000001307	snrnp200	100	96.629	ENSSMAG00000005463	snrnp200	100	96.629	Scophthalmus_maximus
ENSTRUG00000001307	snrnp200	100	97.238	ENSSDUG00000021410	snrnp200	100	97.238	Seriola_dumerili
ENSTRUG00000001307	snrnp200	100	97.051	ENSSLDG00000010884	snrnp200	100	97.051	Seriola_lalandi_dorsalis
ENSTRUG00000001307	snrnp200	95	87.422	ENSSARG00000010728	SNRNP200	96	87.422	Sorex_araneus
ENSTRUG00000001307	snrnp200	99	90.777	ENSSPUG00000003726	-	99	90.841	Sphenodon_punctatus
ENSTRUG00000001307	snrnp200	100	97.238	ENSSPAG00000001842	snrnp200	100	97.238	Stegastes_partitus
ENSTRUG00000001307	snrnp200	99	90.403	ENSSSCG00000008127	SNRNP200	99	90.512	Sus_scrofa
ENSTRUG00000001307	snrnp200	98	82.147	ENSTGUG00000014475	-	100	82.147	Taeniopygia_guttata
ENSTRUG00000001307	snrnp200	99	86.769	ENSTNIG00000004320	snrnp200	100	86.489	Tetraodon_nigroviridis
ENSTRUG00000001307	snrnp200	82	92.958	ENSTBEG00000003329	-	67	92.958	Tupaia_belangeri
ENSTRUG00000001307	snrnp200	99	90.169	ENSTTRG00000004983	SNRNP200	99	90.277	Tursiops_truncatus
ENSTRUG00000001307	snrnp200	95	78.485	ENSUAMG00000008395	-	95	82.849	Ursus_americanus
ENSTRUG00000001307	snrnp200	99	90.403	ENSUMAG00000012385	SNRNP200	99	90.512	Ursus_maritimus
ENSTRUG00000001307	snrnp200	87	93.154	ENSVPAG00000006434	SNRNP200	66	93.154	Vicugna_pacos
ENSTRUG00000001307	snrnp200	99	90.191	ENSVVUG00000026247	SNRNP200	99	90.300	Vulpes_vulpes
ENSTRUG00000001307	snrnp200	99	90.037	ENSXETG00000001243	snrnp200	99	90.099	Xenopus_tropicalis
ENSTRUG00000001307	snrnp200	97	96.088	ENSXMAG00000002058	snrnp200	98	96.088	Xiphophorus_maculatus