EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000001529 (Gene tree)
Gene ID
101062056
Gene Symbol
LSM14B (1 of many)
Alias
C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name
LSM family member 14B
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Plus strand
Length
2491 bases
Position
chrHE592366.1:7526-10016
Accession
101062056
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000003520FDFPF09532.101.2e-1111
ENSTRUP00000056598FDFPF09532.101.2e-1111
ENSTRUP00000003520LSM14PF12701.75.1e-2811
ENSTRUP00000056598LSM14PF12701.75.1e-2811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000003540LSM14B (1 of many)-2011444XM_011618336ENSTRUP00000003520381 (aa)XP_011616638H2RTQ3
ENSTRUT00000058643LSM14B (1 of many)-2021614XM_011618335ENSTRUP00000056598381 (aa)XP_011616637UPI0005D17501
Gene Model
Click here to download ENSTRUG00000001529's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000001529's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000001529LSM14B9138.750ENSTRUG00000004046lsm14aa8941.985
ENSTRUG00000001529LSM14B9450.964ENSTRUG00000011354lsm14b9148.619
ENSTRUG00000001529LSM14B9036.314ENSTRUG00000015798lsm14ab8536.957
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000001529LSM14B9251.771ENSG00000149657LSM14B9949.346Homo_sapiens
ENSTRUG00000001529LSM14B9054.467ENSAPOG00000001780lsm14b9151.507Acanthochromis_polyacanthus
ENSTRUG00000001529LSM14B9244.691ENSAMEG00000013430LSM14B9345.343Ailuropoda_melanoleuca
ENSTRUG00000001529LSM14B9150.000ENSACIG00000012266lsm14b9546.923Amphilophus_citrinellus
ENSTRUG00000001529LSM14B6250.813ENSACIG00000003147LSM14B9048.374Amphilophus_citrinellus
ENSTRUG00000001529LSM14B9053.890ENSAOCG00000012380lsm14b9154.520Amphiprion_ocellaris
ENSTRUG00000001529LSM14B10067.352ENSAOCG00000006667LSM14B10067.352Amphiprion_ocellaris
ENSTRUG00000001529LSM14B9048.459ENSAPEG00000023633lsm14b9048.611Amphiprion_percula
ENSTRUG00000001529LSM14B9051.445ENSATEG00000016603lsm14b9152.125Anabas_testudineus
ENSTRUG00000001529LSM14B7156.187ENSATEG00000015895LSM14B8957.193Anabas_testudineus
ENSTRUG00000001529LSM14B8342.049ENSAPLG00000013203LSM14B9342.781Anas_platyrhynchos
ENSTRUG00000001529LSM14B9249.322ENSACAG00000016195LSM14B9249.731Anolis_carolinensis
ENSTRUG00000001529LSM14B9250.959ENSANAG00000037915LSM14B9251.087Aotus_nancymaae
ENSTRUG00000001529LSM14B9051.003ENSACLG00000019663lsm14b9151.685Astatotilapia_calliptera
ENSTRUG00000001529LSM14B5346.569ENSACLG00000008384-6647.236Astatotilapia_calliptera
ENSTRUG00000001529LSM14B5357.843ENSACLG00000019624-6956.281Astatotilapia_calliptera
ENSTRUG00000001529LSM14B5355.392ENSACLG00000011955-6853.769Astatotilapia_calliptera
ENSTRUG00000001529LSM14B9154.670ENSAMXG00000002865lsm14b9354.987Astyanax_mexicanus
ENSTRUG00000001529LSM14B9244.390ENSBTAG00000021558LSM14B9245.036Bos_taurus
ENSTRUG00000001529LSM14B9250.685ENSCJAG00000014434LSM14B9250.815Callithrix_jacchus
ENSTRUG00000001529LSM14B8241.803ENSCAFG00000012518LSM14B9142.162Canis_familiaris
ENSTRUG00000001529LSM14B9250.000ENSCAFG00020022150LSM14B9250.272Canis_lupus_dingo
ENSTRUG00000001529LSM14B9640.256ENSCHIG00000022681-9140.701Capra_hircus
ENSTRUG00000001529LSM14B9249.319ENSCHIG00000010284-9250.000Capra_hircus
ENSTRUG00000001529LSM14B8147.385ENSTSYG00000031914LSM14B8147.866Carlito_syrichta
ENSTRUG00000001529LSM14B8146.933ENSCAPG00000013059LSM14B9247.112Cavia_aperea
ENSTRUG00000001529LSM14B8147.077ENSCPOG00000038080LSM14B9247.256Cavia_porcellus
ENSTRUG00000001529LSM14B9237.736ENSCCAG00000024900-7736.364Cebus_capucinus
ENSTRUG00000001529LSM14B9250.685ENSCCAG00000021267LSM14B9250.815Cebus_capucinus
ENSTRUG00000001529LSM14B9251.499ENSCATG00000036006LSM14B9251.622Cercocebus_atys
ENSTRUG00000001529LSM14B8147.385ENSCLAG00000003186LSM14B9247.256Chinchilla_lanigera
ENSTRUG00000001529LSM14B9246.040ENSCSAG00000015729LSM14B9246.192Chlorocebus_sabaeus
ENSTRUG00000001529LSM14B9246.020ENSCPBG00000027065LSM14B9346.667Chrysemys_picta_bellii
ENSTRUG00000001529LSM14B8147.077ENSCANG00000036986LSM14B9247.561Colobus_angolensis_palliatus
ENSTRUG00000001529LSM14B9250.689ENSCGRG00001018399Lsm14b9250.820Cricetulus_griseus_chok1gshd
ENSTRUG00000001529LSM14B6137.809ENSCGRG00000006111-9338.112Cricetulus_griseus_crigri
ENSTRUG00000001529LSM14B5536.364ENSCGRG00000002484-8735.426Cricetulus_griseus_crigri
ENSTRUG00000001529LSM14B8951.003ENSCSEG00000004722lsm14b9151.977Cynoglossus_semilaevis
ENSTRUG00000001529LSM14B9759.686ENSCSEG00000020669LSM14B9360.274Cynoglossus_semilaevis
ENSTRUG00000001529LSM14B6445.850ENSCVAG00000012433-8844.351Cyprinodon_variegatus
ENSTRUG00000001529LSM14B9251.630ENSDARG00000025386lsm14b9252.561Danio_rerio
ENSTRUG00000001529LSM14B6138.112ENSDNOG00000025246LSM14B9038.408Dasypus_novemcinctus
ENSTRUG00000001529LSM14B8246.951ENSDORG00000016683Lsm14b9037.847Dipodomys_ordii
ENSTRUG00000001529LSM14B9341.370ENSETEG00000001869-9240.437Echinops_telfairi
ENSTRUG00000001529LSM14B5641.410ENSETEG00000011188-9341.410Echinops_telfairi
ENSTRUG00000001529LSM14B6141.152ENSEASG00005023218LSM14B9038.144Equus_asinus_asinus
ENSTRUG00000001529LSM14B9249.589ENSECAG00000010659LSM14B9249.731Equus_caballus
ENSTRUG00000001529LSM14B5557.426ENSEEUG00000007331LSM14B7659.406Erinaceus_europaeus
ENSTRUG00000001529LSM14B9155.271ENSELUG00000016299LSM14B9356.145Esox_lucius
ENSTRUG00000001529LSM14B9556.085ENSELUG00000005780lsm14b9355.707Esox_lucius
ENSTRUG00000001529LSM14B9250.136ENSFCAG00000003248LSM14B9250.806Felis_catus
ENSTRUG00000001529LSM14B8242.005ENSFALG00000010618LSM14B9342.742Ficedula_albicollis
ENSTRUG00000001529LSM14B8147.077ENSFDAG00000002214LSM14B9247.256Fukomys_damarensis
ENSTRUG00000001529LSM14B8262.579ENSFHEG00000003362LSM14B8262.037Fundulus_heteroclitus
ENSTRUG00000001529LSM14B9149.575ENSFHEG00000006237lsm14b9147.922Fundulus_heteroclitus
ENSTRUG00000001529LSM14B9650.681ENSGMOG00000017115lsm14b8949.858Gadus_morhua
ENSTRUG00000001529LSM14B9249.864ENSGALG00000005125LSM14B9350.270Gallus_gallus
ENSTRUG00000001529LSM14B9044.986ENSGAFG00000020318lsm14b9144.199Gambusia_affinis
ENSTRUG00000001529LSM14B6648.810ENSGAFG00000013723LSM14B8946.835Gambusia_affinis
ENSTRUG00000001529LSM14B9152.557ENSGACG00000009973lsm14b9252.125Gasterosteus_aculeatus
ENSTRUG00000001529LSM14B5541.176ENSGAGG00000004106LSM14B8341.518Gopherus_agassizii
ENSTRUG00000001529LSM14B8348.048ENSGGOG00000005630LSM14B8748.214Gorilla_gorilla
ENSTRUG00000001529LSM14B9249.459ENSHGLG00000015055LSM14B9249.600Heterocephalus_glaber_female
ENSTRUG00000001529LSM14B8145.289ENSHGLG00100015273LSM14B9145.808Heterocephalus_glaber_male
ENSTRUG00000001529LSM14B6039.827ENSHCOG00000004867lsm14b8739.749Hippocampus_comes
ENSTRUG00000001529LSM14B10064.599ENSHCOG00000018747LSM14B9465.181Hippocampus_comes
ENSTRUG00000001529LSM14B9154.444ENSIPUG00000014946lsm14b8755.041Ictalurus_punctatus
ENSTRUG00000001529LSM14B8146.769ENSSTOG00000020482LSM14B9247.273Ictidomys_tridecemlineatus
ENSTRUG00000001529LSM14B9151.811ENSJJAG00000012728Lsm14b9151.934Jaculus_jaculus
ENSTRUG00000001529LSM14B9051.143ENSKMAG00000017524lsm14b9251.966Kryptolebias_marmoratus
ENSTRUG00000001529LSM14B5254.187ENSKMAG00000012834-8954.634Kryptolebias_marmoratus
ENSTRUG00000001529LSM14B6751.562ENSLBEG00000007951LSM14B8848.523Labrus_bergylta
ENSTRUG00000001529LSM14B9146.135ENSLACG00000003849LSM14B9344.743Latimeria_chalumnae
ENSTRUG00000001529LSM14B9152.989ENSLOCG00000003746lsm14b9353.600Lepisosteus_oculatus
ENSTRUG00000001529LSM14B8246.201ENSLAFG00000007492LSM14B9246.988Loxodonta_africana
ENSTRUG00000001529LSM14B9251.771ENSMFAG00000041479LSM14B9251.892Macaca_fascicularis
ENSTRUG00000001529LSM14B9251.771ENSMMUG00000014084LSM14B9251.892Macaca_mulatta
ENSTRUG00000001529LSM14B9251.771ENSMNEG00000045573LSM14B9251.892Macaca_nemestrina
ENSTRUG00000001529LSM14B8148.318ENSMLEG00000040895LSM14B9248.485Mandrillus_leucophaeus
ENSTRUG00000001529LSM14B10067.700ENSMAMG00000024124LSM14B9368.524Mastacembelus_armatus
ENSTRUG00000001529LSM14B9049.573ENSMAMG00000020539lsm14b9446.329Mastacembelus_armatus
ENSTRUG00000001529LSM14B5347.549ENSMZEG00005026087-6746.231Maylandia_zebra
ENSTRUG00000001529LSM14B9264.641ENSMZEG00005026001LSM14B9565.470Maylandia_zebra
ENSTRUG00000001529LSM14B5348.039ENSMZEG00005002688-6746.734Maylandia_zebra
ENSTRUG00000001529LSM14B9050.838ENSMZEG00005000987lsm14b9151.507Maylandia_zebra
ENSTRUG00000001529LSM14B8345.748ENSMGAG00000005300LSM14B9246.221Meleagris_gallopavo
ENSTRUG00000001529LSM14B9249.189ENSMAUG00000020700Lsm14b9250.546Mesocricetus_auratus
ENSTRUG00000001529LSM14B9250.685ENSMICG00000014675LSM14B9250.815Microcebus_murinus
ENSTRUG00000001529LSM14B9250.689ENSMOCG00000020600Lsm14b9250.820Microtus_ochrogaster
ENSTRUG00000001529LSM14B6135.036ENSMOCG00000005119-9335.401Microtus_ochrogaster
ENSTRUG00000001529LSM14B9247.074ENSMMOG00000020042lsm14b9645.623Mola_mola
ENSTRUG00000001529LSM14B10065.570ENSMMOG00000017321LSM14B10064.921Mola_mola
ENSTRUG00000001529LSM14B6138.380ENSMODG00000016690LSM14B9038.676Monodelphis_domestica
ENSTRUG00000001529LSM14B9551.081ENSMALG00000004783lsm14b9248.883Monopterus_albus
ENSTRUG00000001529LSM14B10068.653ENSMALG00000022251LSM14B10068.653Monopterus_albus
ENSTRUG00000001529LSM14B9250.273MGP_CAROLIEiJ_G0024770Lsm14b9250.407Mus_caroli
ENSTRUG00000001529LSM14B9250.273ENSMUSG00000039108Lsm14b9250.407Mus_musculus
ENSTRUG00000001529LSM14B9250.273MGP_PahariEiJ_G0026214Lsm14b9250.407Mus_pahari
ENSTRUG00000001529LSM14B9250.273MGP_SPRETEiJ_G0025693Lsm14b9250.407Mus_spretus
ENSTRUG00000001529LSM14B8742.051ENSMPUG00000007584LSM14B9342.239Mustela_putorius_furo
ENSTRUG00000001529LSM14B9050.420ENSMLUG00000000304LSM14B9250.959Myotis_lucifugus
ENSTRUG00000001529LSM14B5339.640ENSNGAG00000016550Lsm14b6347.945Nannospalax_galili
ENSTRUG00000001529LSM14B8148.624ENSNLEG00000015757LSM14B9248.788Nomascus_leucogenys
ENSTRUG00000001529LSM14B6565.248ENSMEUG00000008267-6666.667Notamacropus_eugenii
ENSTRUG00000001529LSM14B9249.459ENSODEG00000004099LSM14B9249.867Octodon_degus
ENSTRUG00000001529LSM14B9051.289ENSONIG00000020318lsm14b9150.276Oreochromis_niloticus
ENSTRUG00000001529LSM14B7547.387ENSOANG00000003370LSM14B9846.528Ornithorhynchus_anatinus
ENSTRUG00000001529LSM14B8246.483ENSOCUG00000006279LSM14B9246.667Oryctolagus_cuniculus
ENSTRUG00000001529LSM14B9360.784ENSORLG00000028353LSM14B9360.000Oryzias_latipes
ENSTRUG00000001529LSM14B9051.156ENSORLG00000013525lsm14b9150.992Oryzias_latipes
ENSTRUG00000001529LSM14B6144.574ENSORLG00020018191-8643.359Oryzias_latipes_hni
ENSTRUG00000001529LSM14B9051.156ENSORLG00020020553lsm14b9148.611Oryzias_latipes_hni
ENSTRUG00000001529LSM14B9361.345ENSORLG00015013157LSM14B9360.335Oryzias_latipes_hsok
ENSTRUG00000001529LSM14B9051.156ENSORLG00015016862lsm14b9148.611Oryzias_latipes_hsok
ENSTRUG00000001529LSM14B9050.578ENSOMEG00000023917lsm14b9148.056Oryzias_melastigma
ENSTRUG00000001529LSM14B6447.755ENSOMEG00000000171-8646.186Oryzias_melastigma
ENSTRUG00000001529LSM14B9245.792ENSOGAG00000003915LSM14B9245.946Otolemur_garnettii
ENSTRUG00000001529LSM14B8340.909ENSOARG00000014706LSM14B9241.645Ovis_aries
ENSTRUG00000001529LSM14B8348.048ENSPPAG00000035799LSM14B8748.214Pan_paniscus
ENSTRUG00000001529LSM14B9250.136ENSPPRG00000009197LSM14B9250.806Panthera_pardus
ENSTRUG00000001529LSM14B6141.564ENSPTIG00000021518LSM14B9338.567Panthera_tigris_altaica
ENSTRUG00000001529LSM14B9251.771ENSPTRG00000013696LSM14B9251.892Pan_troglodytes
ENSTRUG00000001529LSM14B9251.771ENSPANG00000011747LSM14B9251.892Papio_anubis
ENSTRUG00000001529LSM14B9254.444ENSPKIG00000003275lsm14b8973.958Paramormyrops_kingsleyae
ENSTRUG00000001529LSM14B8247.077ENSPSIG00000014762LSM14B9247.561Pelodiscus_sinensis
ENSTRUG00000001529LSM14B9150.829ENSPEMG00000017688Lsm14b9250.959Peromyscus_maniculatus_bairdii
ENSTRUG00000001529LSM14B9250.689ENSPCIG00000013405LSM14B9251.366Phascolarctos_cinereus
ENSTRUG00000001529LSM14B9947.781ENSPFOG00000005631lsm14b9148.199Poecilia_formosa
ENSTRUG00000001529LSM14B9160.519ENSPLAG00000005793LSM14B9259.437Poecilia_latipinna
ENSTRUG00000001529LSM14B9947.520ENSPLAG00000002449lsm14b9147.922Poecilia_latipinna
ENSTRUG00000001529LSM14B9060.870ENSPMEG00000022953LSM14B9260.000Poecilia_mexicana
ENSTRUG00000001529LSM14B9149.432ENSPMEG00000000745lsm14b9148.199Poecilia_mexicana
ENSTRUG00000001529LSM14B6245.276ENSPREG00000007828LSM14B8946.063Poecilia_reticulata
ENSTRUG00000001529LSM14B9246.774ENSPPYG00000011194LSM14B9244.180Pongo_abelii
ENSTRUG00000001529LSM14B9250.685ENSPCOG00000013625LSM14B9250.815Propithecus_coquereli
ENSTRUG00000001529LSM14B7140.351ENSPVAG00000017918LSM14B9039.465Pteropus_vampyrus
ENSTRUG00000001529LSM14B9154.366ENSPNAG00000012777lsm14b9254.972Pygocentrus_nattereri
ENSTRUG00000001529LSM14B9245.185ENSRNOG00000054557Lsm14b9245.343Rattus_norvegicus
ENSTRUG00000001529LSM14B8146.933ENSRBIG00000033461LSM14B9147.112Rhinopithecus_bieti
ENSTRUG00000001529LSM14B8347.892ENSRROG00000042949LSM14B8348.060Rhinopithecus_roxellana
ENSTRUG00000001529LSM14B8147.385ENSSBOG00000032820LSM14B9247.561Saimiri_boliviensis_boliviensis
ENSTRUG00000001529LSM14B8346.547ENSSHAG00000015528LSM14B8947.321Sarcophilus_harrisii
ENSTRUG00000001529LSM14B9151.695ENSSFOG00015004627lsm14b9352.893Scleropages_formosus
ENSTRUG00000001529LSM14B10069.054ENSSMAG00000000135LSM14B9969.054Scophthalmus_maximus
ENSTRUG00000001529LSM14B9051.705ENSSMAG00000012725lsm14b9252.368Scophthalmus_maximus
ENSTRUG00000001529LSM14B9053.541ENSSDUG00000020977lsm14b9253.611Seriola_dumerili
ENSTRUG00000001529LSM14B10073.643ENSSDUG00000022770LSM14B10073.643Seriola_dumerili
ENSTRUG00000001529LSM14B6958.246ENSSLDG00000011354-10060.702Seriola_lalandi_dorsalis
ENSTRUG00000001529LSM14B5336.986ENSSARG00000007749-9936.986Sorex_araneus
ENSTRUG00000001529LSM14B9245.906ENSSPUG00000014360LSM14B9350.000Sphenodon_punctatus
ENSTRUG00000001529LSM14B6947.535ENSSPAG00000018854-10047.535Stegastes_partitus
ENSTRUG00000001529LSM14B9050.838ENSSPAG00000020915lsm14b9349.347Stegastes_partitus
ENSTRUG00000001529LSM14B9250.409ENSSSCG00000026052LSM14B9039.175Sus_scrofa
ENSTRUG00000001529LSM14B8246.970ENSTGUG00000007884LSM14B9247.198Taeniopygia_guttata
ENSTRUG00000001529LSM14B9148.148ENSTNIG00000002445lsm14b9148.294Tetraodon_nigroviridis
ENSTRUG00000001529LSM14B9144.628ENSUAMG00000025298LSM14B9145.355Ursus_americanus
ENSTRUG00000001529LSM14B9144.628ENSUMAG00000000480LSM14B9145.355Ursus_maritimus
ENSTRUG00000001529LSM14B8247.385ENSVVUG00000015920LSM14B9047.561Vulpes_vulpes
ENSTRUG00000001529LSM14B8649.709ENSXETG00000001997lsm14b10049.709Xenopus_tropicalis
ENSTRUG00000001529LSM14B9049.280ENSXMAG00000010013lsm14b9147.645Xiphophorus_maculatus

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