EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000001545 (Gene tree)
Gene ID: 101078428
Gene Symbol: fip1l1b
Alias: fip1l1|wu:fd36f11|zgc:103421
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 6889 bases
Position: chrHE591990.1:626-7514
Accession: 101078428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000003546	Fip1	PF05182.13	1.5e-25	1	1
ENSTRUP00000003544	Fip1	PF05182.13	1.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000003566	-	2667	-	ENSTRUP00000003546	538 (aa)	-	H2RTS9
ENSTRUT00000003564	-	2721	XM_011617509	ENSTRUP00000003544	556 (aa)	XP_011615811	H2RTS7

Gene Model

Click here to download ENSTRUG00000001545's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000001545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000001545	fip1l1b	71	92.708	ENSACIG00000001454	fip1l1b	96	92.708	Amphilophus_citrinellus
ENSTRUG00000001545	fip1l1b	100	87.993	ENSAOCG00000021043	fip1l1b	100	87.634	Amphiprion_ocellaris
ENSTRUG00000001545	fip1l1b	100	87.993	ENSAPEG00000022229	fip1l1b	100	87.634	Amphiprion_percula
ENSTRUG00000001545	fip1l1b	100	87.246	ENSATEG00000021757	fip1l1b	100	86.876	Anabas_testudineus
ENSTRUG00000001545	fip1l1b	83	55.106	ENSAPLG00000003042	-	90	54.528	Anas_platyrhynchos
ENSTRUG00000001545	fip1l1b	69	67.532	ENSACAG00000010556	-	89	56.391	Anolis_carolinensis
ENSTRUG00000001545	fip1l1b	100	87.061	ENSACLG00000010418	fip1l1b	100	86.691	Astatotilapia_calliptera
ENSTRUG00000001545	fip1l1b	57	64.242	ENSAMXG00000011126	fip1l1b	89	68.182	Astyanax_mexicanus
ENSTRUG00000001545	fip1l1b	55	42.715	ENSAMXG00000031045	fip1l1a	59	47.368	Astyanax_mexicanus
ENSTRUG00000001545	fip1l1b	83	52.851	ENSCAPG00000009569	-	76	66.169	Cavia_aperea
ENSTRUG00000001545	fip1l1b	83	56.389	ENSCPOG00000010770	-	86	64.629	Cavia_porcellus
ENSTRUG00000001545	fip1l1b	99	58.943	ENSCPBG00000025019	-	99	57.913	Chrysemys_picta_bellii
ENSTRUG00000001545	fip1l1b	99	51.987	ENSCGRG00001018568	Fip1l1	99	58.664	Cricetulus_griseus_chok1gshd
ENSTRUG00000001545	fip1l1b	99	51.987	ENSCGRG00000000208	Fip1l1	99	58.664	Cricetulus_griseus_crigri
ENSTRUG00000001545	fip1l1b	100	83.210	ENSCSEG00000006583	fip1l1b	100	82.841	Cynoglossus_semilaevis
ENSTRUG00000001545	fip1l1b	100	82.904	ENSCVAG00000023435	fip1l1b	100	82.537	Cyprinodon_variegatus
ENSTRUG00000001545	fip1l1b	99	42.077	ENSDARG00000043328	fip1l1a	90	49.479	Danio_rerio
ENSTRUG00000001545	fip1l1b	100	65.278	ENSDARG00000070431	fip1l1b	100	64.533	Danio_rerio
ENSTRUG00000001545	fip1l1b	64	50.909	ENSETEG00000018271	-	76	63.636	Echinops_telfairi
ENSTRUG00000001545	fip1l1b	72	52.049	ENSEASG00005019566	-	91	62.032	Equus_asinus_asinus
ENSTRUG00000001545	fip1l1b	69	74.886	ENSELUG00000001280	fip1l1b	81	72.926	Esox_lucius
ENSTRUG00000001545	fip1l1b	99	52.747	ENSELUG00000004607	fip1l1a	73	56.198	Esox_lucius
ENSTRUG00000001545	fip1l1b	100	82.428	ENSFHEG00000003843	fip1l1b	100	82.065	Fundulus_heteroclitus
ENSTRUG00000001545	fip1l1b	100	67.250	ENSGMOG00000004913	fip1l1b	100	67.426	Gadus_morhua
ENSTRUG00000001545	fip1l1b	63	33.600	ENSGMOG00000012065	-	58	37.327	Gadus_morhua
ENSTRUG00000001545	fip1l1b	99	59.132	ENSGALG00000013943	-	99	59.132	Gallus_gallus
ENSTRUG00000001545	fip1l1b	100	82.734	ENSGAFG00000008253	fip1l1b	100	82.374	Gambusia_affinis
ENSTRUG00000001545	fip1l1b	100	70.000	ENSGACG00000015946	fip1l1b	100	69.449	Gasterosteus_aculeatus
ENSTRUG00000001545	fip1l1b	99	58.943	ENSGAGG00000009763	-	94	64.912	Gopherus_agassizii
ENSTRUG00000001545	fip1l1b	53	48.973	ENSGAGG00000017677	-	76	50.177	Gopherus_agassizii
ENSTRUG00000001545	fip1l1b	100	87.061	ENSHBUG00000013978	fip1l1b	100	86.691	Haplochromis_burtoni
ENSTRUG00000001545	fip1l1b	99	78.428	ENSHCOG00000015834	fip1l1b	99	79.596	Hippocampus_comes
ENSTRUG00000001545	fip1l1b	97	54.927	ENSIPUG00000022454	fip1l1b	61	64.078	Ictalurus_punctatus
ENSTRUG00000001545	fip1l1b	100	83.456	ENSKMAG00000021938	fip1l1b	100	83.088	Kryptolebias_marmoratus
ENSTRUG00000001545	fip1l1b	100	84.560	ENSLBEG00000028819	fip1l1b	100	84.381	Labrus_bergylta
ENSTRUG00000001545	fip1l1b	96	61.174	ENSLACG00000011991	fip1l1a	99	60.507	Latimeria_chalumnae
ENSTRUG00000001545	fip1l1b	99	63.889	ENSLOCG00000014127	fip1l1b	99	64.062	Lepisosteus_oculatus
ENSTRUG00000001545	fip1l1b	100	85.978	ENSMAMG00000004535	fip1l1b	100	85.609	Mastacembelus_armatus
ENSTRUG00000001545	fip1l1b	100	86.876	ENSMZEG00005023828	fip1l1b	100	86.506	Maylandia_zebra
ENSTRUG00000001545	fip1l1b	99	52.880	ENSMAUG00000010526	Fip1l1	99	55.594	Mesocricetus_auratus
ENSTRUG00000001545	fip1l1b	54	54.754	ENSMOCG00000008020	Fip1l1	99	55.178	Microtus_ochrogaster
ENSTRUG00000001545	fip1l1b	100	63.472	ENSMALG00000000838	fip1l1b	89	78.363	Monopterus_albus
ENSTRUG00000001545	fip1l1b	83	56.187	ENSNGAG00000008849	Fip1l1	99	59.239	Nannospalax_galili
ENSTRUG00000001545	fip1l1b	100	86.762	ENSNBRG00000017832	fip1l1b	100	86.404	Neolamprologus_brichardi
ENSTRUG00000001545	fip1l1b	100	86.047	ENSONIG00000008785	fip1l1b	100	85.689	Oreochromis_niloticus
ENSTRUG00000001545	fip1l1b	83	50.284	ENSOANG00000003384	-	80	51.838	Ornithorhynchus_anatinus
ENSTRUG00000001545	fip1l1b	100	84.346	ENSORLG00000004397	fip1l1b	100	83.978	Oryzias_latipes
ENSTRUG00000001545	fip1l1b	100	84.162	ENSORLG00020008716	fip1l1b	100	83.425	Oryzias_latipes_hni
ENSTRUG00000001545	fip1l1b	100	83.978	ENSORLG00015006736	fip1l1b	100	83.610	Oryzias_latipes_hsok
ENSTRUG00000001545	fip1l1b	100	58.481	ENSOMEG00000015730	fip1l1b	97	84.831	Oryzias_melastigma
ENSTRUG00000001545	fip1l1b	100	71.454	ENSPMGG00000017028	fip1l1b	53	69.508	Periophthalmus_magnuspinnatus
ENSTRUG00000001545	fip1l1b	54	54.870	ENSPEMG00000002025	Fip1l1	99	58.303	Peromyscus_maniculatus_bairdii
ENSTRUG00000001545	fip1l1b	100	82.310	ENSPFOG00000014745	fip1l1b	100	81.949	Poecilia_formosa
ENSTRUG00000001545	fip1l1b	100	79.279	ENSPLAG00000010954	fip1l1b	100	81.802	Poecilia_latipinna
ENSTRUG00000001545	fip1l1b	100	82.491	ENSPMEG00000019187	fip1l1b	100	82.130	Poecilia_mexicana
ENSTRUG00000001545	fip1l1b	83	66.071	ENSPREG00000012535	fip1l1b	83	92.308	Poecilia_reticulata
ENSTRUG00000001545	fip1l1b	57	85.047	ENSPNYG00000015976	fip1l1b	84	84.424	Pundamilia_nyererei
ENSTRUG00000001545	fip1l1b	59	65.089	ENSPNAG00000015341	fip1l1b	71	66.769	Pygocentrus_nattereri
ENSTRUG00000001545	fip1l1b	62	44.970	ENSPNAG00000009853	fip1l1a	60	51.887	Pygocentrus_nattereri
ENSTRUG00000001545	fip1l1b	56	46.894	ENSSFOG00015010948	-	56	54.884	Scleropages_formosus
ENSTRUG00000001545	fip1l1b	100	86.506	ENSSMAG00000013444	fip1l1b	100	85.952	Scophthalmus_maximus
ENSTRUG00000001545	fip1l1b	100	89.094	ENSSDUG00000004117	fip1l1b	100	88.725	Seriola_dumerili
ENSTRUG00000001545	fip1l1b	100	88.889	ENSSLDG00000024099	fip1l1b	100	88.333	Seriola_lalandi_dorsalis
ENSTRUG00000001545	fip1l1b	71	52.344	ENSSARG00000001973	-	88	62.032	Sorex_araneus
ENSTRUG00000001545	fip1l1b	52	52.982	ENSSPUG00000017328	-	92	55.088	Sphenodon_punctatus
ENSTRUG00000001545	fip1l1b	100	87.455	ENSSPAG00000017564	fip1l1b	100	87.097	Stegastes_partitus
ENSTRUG00000001545	fip1l1b	100	83.615	ENSTNIG00000004104	fip1l1b	92	93.443	Tetraodon_nigroviridis
ENSTRUG00000001545	fip1l1b	72	57.576	ENSUMAG00000002758	-	85	62.567	Ursus_maritimus
ENSTRUG00000001545	fip1l1b	71	52.734	ENSVPAG00000011574	-	75	62.032	Vicugna_pacos
ENSTRUG00000001545	fip1l1b	96	59.191	ENSXETG00000011679	fip1l1	93	53.214	Xenopus_tropicalis
ENSTRUG00000001545	fip1l1b	100	63.486	ENSXCOG00000013656	fip1l1b	63	76.325	Xiphophorus_couchianus
ENSTRUG00000001545	fip1l1b	100	82.130	ENSXMAG00000017620	fip1l1b	100	81.769	Xiphophorus_maculatus