EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000001784 (Gene tree)
Gene ID: -
Gene Symbol: cnot1 (1 of many)
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex%2C subunit 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5330 bases
Position: chrHE592427.1:9157-14486
Accession: ZDB-GENE-040915-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000004116	Not1	PF04054.15	5.5e-154	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000004138	-	2475	-	ENSTRUP00000004116	824 (aa)	-	H2RVE8

Gene Model

Click here to download ENSTRUG00000001784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000001784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000001784	cnot1	100	96.117	ENSG00000125107	CNOT1	100	93.850	Homo_sapiens
ENSTRUG00000001784	cnot1	100	99.152	ENSAOCG00000002859	cnot1	100	99.152	Amphiprion_ocellaris
ENSTRUG00000001784	cnot1	99	40.664	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSTRUG00000001784	cnot1	100	96.117	ENSCJAG00000011318	CNOT1	100	92.545	Callithrix_jacchus
ENSTRUG00000001784	cnot1	97	73.875	ENSCAPG00000007848	-	99	73.875	Cavia_aperea
ENSTRUG00000001784	cnot1	100	96.984	ENSCSEG00000021493	cnot1	100	96.984	Cynoglossus_semilaevis
ENSTRUG00000001784	cnot1	100	96.117	ENSDORG00000002101	-	100	96.117	Dipodomys_ordii
ENSTRUG00000001784	cnot1	100	98.908	ENSGACG00000002606	cnot1	100	98.908	Gasterosteus_aculeatus
ENSTRUG00000001784	cnot1	100	96.117	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSTRUG00000001784	cnot1	99	95.838	ENSMAUG00000009731	-	99	95.838	Mesocricetus_auratus
ENSTRUG00000001784	cnot1	66	100.000	ENSPMGG00000002161	-	100	100.000	Periophthalmus_magnuspinnatus
ENSTRUG00000001784	cnot1	100	91.383	ENSPEMG00000014520	-	100	91.383	Peromyscus_maniculatus_bairdii