EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000001982 (Gene tree)
Gene ID: 101071024
Gene Symbol: a1cf
Alias: acf
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 8341 bases
Position: chr1:2436346-2444686
Accession: 101071024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000004572	DND1_DSRM	PF14709.7	6.6e-27	1	1
ENSTRUP00000004572	RRM_1	PF00076.22	1.6e-40	1	3
ENSTRUP00000004572	RRM_1	PF00076.22	1.6e-40	2	3
ENSTRUP00000004572	RRM_1	PF00076.22	1.6e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000004597	-	4177	XM_003961202	ENSTRUP00000004572	613 (aa)	XP_003961251	H2RWQ2

Gene Model

Click here to download ENSTRUG00000001982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000001982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000001982	a1cf	88	51.193	ENSTRUG00000014050	rbm47	81	50.640
ENSTRUG00000001982	a1cf	67	61.438	ENSTRUG00000004237	rbm46	81	63.636
ENSTRUG00000001982	a1cf	54	50.000	ENSTRUG00000005365	syncripl	56	52.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000001982	a1cf	100	74.878	ENSG00000148584	A1CF	100	84.653	Homo_sapiens
ENSTRUG00000001982	a1cf	100	80.702	ENSAPOG00000008259	a1cf	100	81.717	Acanthochromis_polyacanthus
ENSTRUG00000001982	a1cf	100	73.246	ENSAMEG00000000523	A1CF	100	74.225	Ailuropoda_melanoleuca
ENSTRUG00000001982	a1cf	100	84.253	ENSACIG00000008632	a1cf	100	85.552	Amphilophus_citrinellus
ENSTRUG00000001982	a1cf	100	82.114	ENSAOCG00000023744	a1cf	96	88.473	Amphiprion_ocellaris
ENSTRUG00000001982	a1cf	100	83.252	ENSAPEG00000009537	a1cf	100	84.878	Amphiprion_percula
ENSTRUG00000001982	a1cf	100	87.805	ENSATEG00000013720	a1cf	100	87.154	Anabas_testudineus
ENSTRUG00000001982	a1cf	100	75.693	ENSAPLG00000002964	A1CF	100	75.693	Anas_platyrhynchos
ENSTRUG00000001982	a1cf	100	71.941	ENSACAG00000015269	A1CF	100	71.941	Anolis_carolinensis
ENSTRUG00000001982	a1cf	100	73.899	ENSANAG00000019974	A1CF	100	73.573	Aotus_nancymaae
ENSTRUG00000001982	a1cf	100	81.656	ENSACLG00000017428	a1cf	100	83.442	Astatotilapia_calliptera
ENSTRUG00000001982	a1cf	100	73.625	ENSAMXG00000018180	a1cf	100	73.786	Astyanax_mexicanus
ENSTRUG00000001982	a1cf	100	73.899	ENSBTAG00000021195	A1CF	100	75.311	Bos_taurus
ENSTRUG00000001982	a1cf	100	74.878	ENSCJAG00000005045	A1CF	100	74.551	Callithrix_jacchus
ENSTRUG00000001982	a1cf	100	73.573	ENSCAFG00000015581	A1CF	100	73.899	Canis_familiaris
ENSTRUG00000001982	a1cf	100	73.573	ENSCAFG00020026421	A1CF	98	81.544	Canis_lupus_dingo
ENSTRUG00000001982	a1cf	100	75.204	ENSCHIG00000020411	A1CF	100	75.367	Capra_hircus
ENSTRUG00000001982	a1cf	94	74.957	ENSTSYG00000001755	A1CF	100	73.921	Carlito_syrichta
ENSTRUG00000001982	a1cf	100	73.231	ENSCAPG00000017386	A1CF	100	73.163	Cavia_aperea
ENSTRUG00000001982	a1cf	100	74.388	ENSCPOG00000009807	A1CF	100	74.388	Cavia_porcellus
ENSTRUG00000001982	a1cf	100	75.041	ENSCCAG00000018168	A1CF	100	74.878	Cebus_capucinus
ENSTRUG00000001982	a1cf	100	73.083	ENSCATG00000043715	A1CF	100	73.083	Cercocebus_atys
ENSTRUG00000001982	a1cf	100	74.225	ENSCLAG00000010424	A1CF	100	74.225	Chinchilla_lanigera
ENSTRUG00000001982	a1cf	100	74.225	ENSCSAG00000007032	A1CF	100	74.225	Chlorocebus_sabaeus
ENSTRUG00000001982	a1cf	98	70.772	ENSCHOG00000009089	A1CF	99	71.264	Choloepus_hoffmanni
ENSTRUG00000001982	a1cf	100	75.530	ENSCPBG00000026464	A1CF	100	75.367	Chrysemys_picta_bellii
ENSTRUG00000001982	a1cf	100	74.388	ENSCANG00000038032	A1CF	100	74.388	Colobus_angolensis_palliatus
ENSTRUG00000001982	a1cf	100	74.062	ENSCGRG00001017413	A1cf	100	73.899	Cricetulus_griseus_chok1gshd
ENSTRUG00000001982	a1cf	100	73.409	ENSCGRG00000017332	A1cf	100	73.573	Cricetulus_griseus_crigri
ENSTRUG00000001982	a1cf	100	85.203	ENSCSEG00000002361	a1cf	100	85.161	Cynoglossus_semilaevis
ENSTRUG00000001982	a1cf	100	86.829	ENSCVAG00000010520	a1cf	100	86.179	Cyprinodon_variegatus
ENSTRUG00000001982	a1cf	100	78.827	ENSDARG00000002968	a1cf	100	78.827	Danio_rerio
ENSTRUG00000001982	a1cf	100	73.899	ENSDNOG00000002829	A1CF	100	74.062	Dasypus_novemcinctus
ENSTRUG00000001982	a1cf	81	83.333	ENSETEG00000012527	A1CF	81	83.333	Echinops_telfairi
ENSTRUG00000001982	a1cf	100	74.104	ENSEASG00005012924	A1CF	100	74.593	Equus_asinus_asinus
ENSTRUG00000001982	a1cf	100	73.779	ENSECAG00000010424	A1CF	100	74.267	Equus_caballus
ENSTRUG00000001982	a1cf	79	64.803	ENSEEUG00000000013	A1CF	100	64.803	Erinaceus_europaeus
ENSTRUG00000001982	a1cf	100	79.350	ENSELUG00000003159	a1cf	100	79.350	Esox_lucius
ENSTRUG00000001982	a1cf	100	72.313	ENSFCAG00000011179	A1CF	100	73.083	Felis_catus
ENSTRUG00000001982	a1cf	100	74.062	ENSFALG00000013183	A1CF	100	74.062	Ficedula_albicollis
ENSTRUG00000001982	a1cf	100	73.246	ENSFDAG00000019371	A1CF	100	73.246	Fukomys_damarensis
ENSTRUG00000001982	a1cf	100	79.483	ENSFHEG00000019652	a1cf	96	88.281	Fundulus_heteroclitus
ENSTRUG00000001982	a1cf	100	76.672	ENSGMOG00000018943	a1cf	100	76.384	Gadus_morhua
ENSTRUG00000001982	a1cf	95	75.345	ENSGALG00000003765	A1CF	96	75.345	Gallus_gallus
ENSTRUG00000001982	a1cf	100	79.187	ENSGAFG00000014868	a1cf	100	78.862	Gambusia_affinis
ENSTRUG00000001982	a1cf	100	84.365	ENSGACG00000010241	a1cf	100	83.740	Gasterosteus_aculeatus
ENSTRUG00000001982	a1cf	96	74.660	ENSGAGG00000016508	A1CF	98	74.660	Gopherus_agassizii
ENSTRUG00000001982	a1cf	100	74.878	ENSGGOG00000009670	A1CF	100	74.878	Gorilla_gorilla
ENSTRUG00000001982	a1cf	100	84.740	ENSHBUG00000021959	a1cf	100	86.039	Haplochromis_burtoni
ENSTRUG00000001982	a1cf	100	73.736	ENSHGLG00000008955	A1CF	100	74.225	Heterocephalus_glaber_female
ENSTRUG00000001982	a1cf	100	73.083	ENSHGLG00100000518	A1CF	100	73.573	Heterocephalus_glaber_male
ENSTRUG00000001982	a1cf	100	72.830	ENSHCOG00000017669	a1cf	100	74.598	Hippocampus_comes
ENSTRUG00000001982	a1cf	89	82.537	ENSIPUG00000010367	a1cf	99	80.668	Ictalurus_punctatus
ENSTRUG00000001982	a1cf	100	86.570	ENSKMAG00000006568	a1cf	100	85.922	Kryptolebias_marmoratus
ENSTRUG00000001982	a1cf	99	86.482	ENSLBEG00000020994	a1cf	99	87.948	Labrus_bergylta
ENSTRUG00000001982	a1cf	100	76.672	ENSLACG00000008061	A1CF	100	76.672	Latimeria_chalumnae
ENSTRUG00000001982	a1cf	100	78.956	ENSLOCG00000006302	a1cf	100	79.119	Lepisosteus_oculatus
ENSTRUG00000001982	a1cf	100	75.530	ENSLAFG00000015462	A1CF	100	75.693	Loxodonta_africana
ENSTRUG00000001982	a1cf	100	73.246	ENSMFAG00000035948	A1CF	100	73.246	Macaca_fascicularis
ENSTRUG00000001982	a1cf	100	73.246	ENSMMUG00000007077	A1CF	100	73.246	Macaca_mulatta
ENSTRUG00000001982	a1cf	100	73.083	ENSMNEG00000031454	A1CF	98	75.220	Macaca_nemestrina
ENSTRUG00000001982	a1cf	100	74.225	ENSMLEG00000037223	A1CF	100	74.225	Mandrillus_leucophaeus
ENSTRUG00000001982	a1cf	100	85.528	ENSMAMG00000010402	a1cf	100	85.366	Mastacembelus_armatus
ENSTRUG00000001982	a1cf	100	84.691	ENSMZEG00005013245	a1cf	100	84.202	Maylandia_zebra
ENSTRUG00000001982	a1cf	100	74.430	ENSMGAG00000001507	A1CF	100	74.430	Meleagris_gallopavo
ENSTRUG00000001982	a1cf	100	73.246	ENSMAUG00000007422	A1cf	100	73.409	Mesocricetus_auratus
ENSTRUG00000001982	a1cf	100	73.008	ENSMICG00000003377	A1CF	100	73.539	Microcebus_murinus
ENSTRUG00000001982	a1cf	100	73.736	ENSMOCG00000021536	A1cf	100	74.225	Microtus_ochrogaster
ENSTRUG00000001982	a1cf	100	75.081	ENSMMOG00000009422	a1cf	100	75.407	Mola_mola
ENSTRUG00000001982	a1cf	92	74.468	ENSMODG00000016478	A1CF	99	74.468	Monodelphis_domestica
ENSTRUG00000001982	a1cf	100	77.687	ENSMALG00000012992	a1cf	100	77.524	Monopterus_albus
ENSTRUG00000001982	a1cf	100	73.736	MGP_CAROLIEiJ_G0022873	A1cf	100	73.736	Mus_caroli
ENSTRUG00000001982	a1cf	100	73.736	ENSMUSG00000052595	A1cf	99	81.208	Mus_musculus
ENSTRUG00000001982	a1cf	100	72.920	MGP_PahariEiJ_G0014366	A1cf	100	72.920	Mus_pahari
ENSTRUG00000001982	a1cf	100	73.736	MGP_SPRETEiJ_G0023792	A1cf	100	73.736	Mus_spretus
ENSTRUG00000001982	a1cf	100	69.005	ENSMPUG00000016971	A1CF	100	69.331	Mustela_putorius_furo
ENSTRUG00000001982	a1cf	100	74.388	ENSMLUG00000016071	A1CF	100	74.878	Myotis_lucifugus
ENSTRUG00000001982	a1cf	100	74.388	ENSNGAG00000015136	A1cf	100	74.388	Nannospalax_galili
ENSTRUG00000001982	a1cf	100	84.903	ENSNBRG00000001712	a1cf	100	86.201	Neolamprologus_brichardi
ENSTRUG00000001982	a1cf	100	75.041	ENSNLEG00000012028	A1CF	100	75.041	Nomascus_leucogenys
ENSTRUG00000001982	a1cf	94	73.575	ENSMEUG00000015909	A1CF	100	73.575	Notamacropus_eugenii
ENSTRUG00000001982	a1cf	88	67.593	ENSOPRG00000010667	A1CF	100	66.014	Ochotona_princeps
ENSTRUG00000001982	a1cf	100	85.390	ENSONIG00000019105	a1cf	100	86.201	Oreochromis_niloticus
ENSTRUG00000001982	a1cf	78	73.859	ENSOANG00000007360	A1CF	93	77.111	Ornithorhynchus_anatinus
ENSTRUG00000001982	a1cf	100	72.431	ENSOCUG00000011587	A1CF	100	73.127	Oryctolagus_cuniculus
ENSTRUG00000001982	a1cf	100	82.276	ENSORLG00000013342	a1cf	100	81.463	Oryzias_latipes
ENSTRUG00000001982	a1cf	100	84.091	ENSORLG00020000586	a1cf	100	83.929	Oryzias_latipes_hni
ENSTRUG00000001982	a1cf	100	84.091	ENSORLG00015018569	a1cf	100	83.929	Oryzias_latipes_hsok
ENSTRUG00000001982	a1cf	100	83.415	ENSOMEG00000013531	a1cf	100	82.927	Oryzias_melastigma
ENSTRUG00000001982	a1cf	100	74.551	ENSOGAG00000012884	A1CF	100	74.715	Otolemur_garnettii
ENSTRUG00000001982	a1cf	100	75.204	ENSOARG00000013695	A1CF	100	75.367	Ovis_aries
ENSTRUG00000001982	a1cf	95	75.086	ENSPPAG00000028115	A1CF	99	78.585	Pan_paniscus
ENSTRUG00000001982	a1cf	100	73.453	ENSPPRG00000012180	A1CF	100	74.225	Panthera_pardus
ENSTRUG00000001982	a1cf	100	73.453	ENSPTIG00000021223	A1CF	100	74.225	Panthera_tigris_altaica
ENSTRUG00000001982	a1cf	100	74.878	ENSPTRG00000002508	A1CF	100	74.878	Pan_troglodytes
ENSTRUG00000001982	a1cf	100	73.246	ENSPANG00000021988	A1CF	100	73.246	Papio_anubis
ENSTRUG00000001982	a1cf	100	77.977	ENSPKIG00000025176	a1cf	100	78.303	Paramormyrops_kingsleyae
ENSTRUG00000001982	a1cf	100	73.899	ENSPSIG00000010318	A1CF	100	73.736	Pelodiscus_sinensis
ENSTRUG00000001982	a1cf	98	69.154	ENSPMGG00000013359	a1cf	99	69.687	Periophthalmus_magnuspinnatus
ENSTRUG00000001982	a1cf	100	74.062	ENSPEMG00000015021	A1cf	100	74.062	Peromyscus_maniculatus_bairdii
ENSTRUG00000001982	a1cf	100	73.409	ENSPCIG00000002175	A1CF	100	73.409	Phascolarctos_cinereus
ENSTRUG00000001982	a1cf	100	88.130	ENSPFOG00000006683	a1cf	100	87.642	Poecilia_formosa
ENSTRUG00000001982	a1cf	100	87.967	ENSPFOG00000007437	-	100	87.480	Poecilia_formosa
ENSTRUG00000001982	a1cf	100	86.504	ENSPLAG00000000026	a1cf	100	86.016	Poecilia_latipinna
ENSTRUG00000001982	a1cf	100	86.504	ENSPLAG00000001210	-	100	86.016	Poecilia_latipinna
ENSTRUG00000001982	a1cf	100	78.374	ENSPMEG00000000921	a1cf	100	78.374	Poecilia_mexicana
ENSTRUG00000001982	a1cf	100	79.675	ENSPMEG00000015529	-	100	79.675	Poecilia_mexicana
ENSTRUG00000001982	a1cf	100	87.805	ENSPREG00000016298	a1cf	100	87.317	Poecilia_reticulata
ENSTRUG00000001982	a1cf	100	73.899	ENSPPYG00000002819	A1CF	100	73.899	Pongo_abelii
ENSTRUG00000001982	a1cf	80	58.163	ENSPCAG00000006463	A1CF	79	58.163	Procavia_capensis
ENSTRUG00000001982	a1cf	100	73.899	ENSPCOG00000024172	A1CF	100	74.430	Propithecus_coquereli
ENSTRUG00000001982	a1cf	100	86.364	ENSPNYG00000017944	a1cf	100	87.662	Pundamilia_nyererei
ENSTRUG00000001982	a1cf	100	79.545	ENSPNAG00000007704	a1cf	100	79.870	Pygocentrus_nattereri
ENSTRUG00000001982	a1cf	100	72.920	ENSRNOG00000033195	A1cf	100	72.920	Rattus_norvegicus
ENSTRUG00000001982	a1cf	100	69.106	ENSRBIG00000042892	A1CF	100	71.591	Rhinopithecus_bieti
ENSTRUG00000001982	a1cf	100	74.388	ENSRROG00000041398	A1CF	100	74.388	Rhinopithecus_roxellana
ENSTRUG00000001982	a1cf	100	74.878	ENSSBOG00000021930	A1CF	100	74.878	Saimiri_boliviensis_boliviensis
ENSTRUG00000001982	a1cf	100	73.736	ENSSHAG00000005096	A1CF	100	73.736	Sarcophilus_harrisii
ENSTRUG00000001982	a1cf	100	78.768	ENSSFOG00015011774	a1cf	100	78.930	Scleropages_formosus
ENSTRUG00000001982	a1cf	100	86.224	ENSSMAG00000013271	a1cf	100	85.900	Scophthalmus_maximus
ENSTRUG00000001982	a1cf	100	86.319	ENSSDUG00000013930	a1cf	100	85.668	Seriola_dumerili
ENSTRUG00000001982	a1cf	100	78.339	ENSSLDG00000004290	a1cf	100	78.339	Seriola_lalandi_dorsalis
ENSTRUG00000001982	a1cf	95	65.979	ENSSARG00000005940	A1CF	95	65.292	Sorex_araneus
ENSTRUG00000001982	a1cf	97	72.910	ENSSPUG00000006797	A1CF	97	72.910	Sphenodon_punctatus
ENSTRUG00000001982	a1cf	100	75.204	ENSSSCG00000010431	A1CF	100	75.367	Sus_scrofa
ENSTRUG00000001982	a1cf	100	75.244	ENSTGUG00000005090	A1CF	100	75.244	Taeniopygia_guttata
ENSTRUG00000001982	a1cf	100	94.156	ENSTNIG00000003580	a1cf	100	93.344	Tetraodon_nigroviridis
ENSTRUG00000001982	a1cf	95	69.759	ENSTTRG00000013190	A1CF	94	70.103	Tursiops_truncatus
ENSTRUG00000001982	a1cf	100	72.920	ENSUAMG00000020065	A1CF	100	72.920	Ursus_americanus
ENSTRUG00000001982	a1cf	100	73.573	ENSUMAG00000011162	A1CF	100	74.062	Ursus_maritimus
ENSTRUG00000001982	a1cf	87	71.322	ENSVPAG00000006130	A1CF	86	71.322	Vicugna_pacos
ENSTRUG00000001982	a1cf	100	72.920	ENSVVUG00000002504	A1CF	100	72.920	Vulpes_vulpes
ENSTRUG00000001982	a1cf	100	69.984	ENSXETG00000006611	a1cf	100	69.821	Xenopus_tropicalis
ENSTRUG00000001982	a1cf	100	86.829	ENSXCOG00000003302	a1cf	100	86.179	Xiphophorus_couchianus
ENSTRUG00000001982	a1cf	100	88.130	ENSXMAG00000016703	a1cf	100	87.480	Xiphophorus_maculatus