EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000002727 (Gene tree)
Gene ID: 101073349
Gene Symbol: wdr3
Alias: sb:cb42|wu:fb92b07
Full Name: WD repeat domain 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7045 bases
Position: chr1:21440684-21447728
Accession: 101073349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000006345	Utp12	PF04003.12	3.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000006385	-	3423	XM_003962169	ENSTRUP00000006345	942 (aa)	XP_003962218	H2S1S4

Gene Model

Click here to download ENSTRUG00000002727's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000002727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000002727	wdr3	53	31.034	ENSTRUG00000007010	tbl3	60	31.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000002727	wdr3	100	68.360	ENSG00000065183	WDR3	99	68.114	Homo_sapiens
ENSTRUG00000002727	wdr3	100	80.892	ENSAPOG00000005975	wdr3	99	84.736	Acanthochromis_polyacanthus
ENSTRUG00000002727	wdr3	99	68.187	ENSAMEG00000004339	WDR3	98	68.182	Ailuropoda_melanoleuca
ENSTRUG00000002727	wdr3	100	63.810	ENSACIG00000006993	wdr3	100	72.804	Amphilophus_citrinellus
ENSTRUG00000002727	wdr3	100	83.015	ENSAOCG00000023966	wdr3	99	84.624	Amphiprion_ocellaris
ENSTRUG00000002727	wdr3	100	84.395	ENSAPEG00000018223	wdr3	100	84.395	Amphiprion_percula
ENSTRUG00000002727	wdr3	100	85.669	ENSATEG00000000703	wdr3	100	85.669	Anabas_testudineus
ENSTRUG00000002727	wdr3	99	63.492	ENSACAG00000008210	WDR3	98	64.147	Anolis_carolinensis
ENSTRUG00000002727	wdr3	100	68.148	ENSANAG00000033348	WDR3	100	67.302	Aotus_nancymaae
ENSTRUG00000002727	wdr3	100	85.669	ENSACLG00000016975	wdr3	100	85.563	Astatotilapia_calliptera
ENSTRUG00000002727	wdr3	99	78.579	ENSAMXG00000005755	wdr3	99	78.556	Astyanax_mexicanus
ENSTRUG00000002727	wdr3	100	67.831	ENSBTAG00000019937	WDR3	99	67.585	Bos_taurus
ENSTRUG00000002727	wdr3	100	35.276	WBGene00017435	F13H8.2	98	35.501	Caenorhabditis_elegans
ENSTRUG00000002727	wdr3	100	67.937	ENSCJAG00000005749	WDR3	100	67.619	Callithrix_jacchus
ENSTRUG00000002727	wdr3	99	68.717	ENSCAFG00000009916	WDR3	98	68.831	Canis_familiaris
ENSTRUG00000002727	wdr3	92	68.241	ENSCAFG00020020610	WDR3	94	69.336	Canis_lupus_dingo
ENSTRUG00000002727	wdr3	99	68.114	ENSCHIG00000010490	WDR3	99	67.797	Capra_hircus
ENSTRUG00000002727	wdr3	100	67.265	ENSTSYG00000002158	WDR3	99	67.019	Carlito_syrichta
ENSTRUG00000002727	wdr3	100	55.532	ENSCAPG00000015805	WDR3	100	54.968	Cavia_aperea
ENSTRUG00000002727	wdr3	100	68.571	ENSCPOG00000011305	WDR3	99	68.008	Cavia_porcellus
ENSTRUG00000002727	wdr3	100	68.008	ENSCCAG00000037237	WDR3	98	68.364	Cebus_capucinus
ENSTRUG00000002727	wdr3	100	68.148	ENSCATG00000037200	WDR3	99	67.903	Cercocebus_atys
ENSTRUG00000002727	wdr3	99	68.432	ENSCLAG00000010657	WDR3	99	68.114	Chinchilla_lanigera
ENSTRUG00000002727	wdr3	100	67.937	ENSCSAG00000001705	WDR3	99	67.691	Chlorocebus_sabaeus
ENSTRUG00000002727	wdr3	81	67.143	ENSCHOG00000006428	WDR3	83	67.143	Choloepus_hoffmanni
ENSTRUG00000002727	wdr3	98	68.359	ENSCPBG00000001426	WDR3	98	68.256	Chrysemys_picta_bellii
ENSTRUG00000002727	wdr3	99	66.737	ENSCGRG00001019544	Wdr3	99	66.350	Cricetulus_griseus_chok1gshd
ENSTRUG00000002727	wdr3	100	64.286	ENSCGRG00000001027	Wdr3	88	65.714	Cricetulus_griseus_crigri
ENSTRUG00000002727	wdr3	100	83.333	ENSCSEG00000009381	wdr3	100	83.439	Cynoglossus_semilaevis
ENSTRUG00000002727	wdr3	100	79.639	ENSCVAG00000014846	wdr3	100	79.533	Cyprinodon_variegatus
ENSTRUG00000002727	wdr3	99	78.662	ENSDARG00000011079	wdr3	99	79.193	Danio_rerio
ENSTRUG00000002727	wdr3	100	68.042	ENSDNOG00000018114	WDR3	99	67.797	Dasypus_novemcinctus
ENSTRUG00000002727	wdr3	100	66.420	ENSDORG00000011031	Wdr3	99	66.387	Dipodomys_ordii
ENSTRUG00000002727	wdr3	98	42.888	FBgn0038597	CG8064	98	42.569	Drosophila_melanogaster
ENSTRUG00000002727	wdr3	99	67.691	ENSEASG00005006393	WDR3	99	67.373	Equus_asinus_asinus
ENSTRUG00000002727	wdr3	99	67.691	ENSECAG00000006575	WDR3	99	67.373	Equus_caballus
ENSTRUG00000002727	wdr3	95	68.645	ENSEEUG00000002218	WDR3	100	68.498	Erinaceus_europaeus
ENSTRUG00000002727	wdr3	99	78.981	ENSELUG00000005997	wdr3	99	79.193	Esox_lucius
ENSTRUG00000002727	wdr3	99	68.717	ENSFCAG00000003469	WDR3	98	68.831	Felis_catus
ENSTRUG00000002727	wdr3	98	66.991	ENSFALG00000005089	WDR3	98	66.883	Ficedula_albicollis
ENSTRUG00000002727	wdr3	99	68.114	ENSFDAG00000016284	WDR3	99	67.797	Fukomys_damarensis
ENSTRUG00000002727	wdr3	100	83.581	ENSFHEG00000012138	wdr3	100	78.769	Fundulus_heteroclitus
ENSTRUG00000002727	wdr3	95	71.375	ENSGMOG00000002962	wdr3	100	70.818	Gadus_morhua
ENSTRUG00000002727	wdr3	98	66.847	ENSGALG00000014791	WDR3	98	66.956	Gallus_gallus
ENSTRUG00000002727	wdr3	100	82.715	ENSGAFG00000013102	wdr3	100	82.927	Gambusia_affinis
ENSTRUG00000002727	wdr3	95	76.937	ENSGACG00000008251	wdr3	100	75.993	Gasterosteus_aculeatus
ENSTRUG00000002727	wdr3	95	68.533	ENSGAGG00000009171	WDR3	96	68.085	Gopherus_agassizii
ENSTRUG00000002727	wdr3	100	68.254	ENSGGOG00000009982	WDR3	99	68.008	Gorilla_gorilla
ENSTRUG00000002727	wdr3	100	85.775	ENSHBUG00000004367	wdr3	100	85.669	Haplochromis_burtoni
ENSTRUG00000002727	wdr3	100	67.513	ENSHGLG00000017936	WDR3	99	67.267	Heterocephalus_glaber_female
ENSTRUG00000002727	wdr3	100	67.513	ENSHGLG00100008292	WDR3	99	67.267	Heterocephalus_glaber_male
ENSTRUG00000002727	wdr3	100	74.101	ENSHCOG00000017501	wdr3	98	80.952	Hippocampus_comes
ENSTRUG00000002727	wdr3	99	77.176	ENSIPUG00000003396	wdr3	99	77.282	Ictalurus_punctatus
ENSTRUG00000002727	wdr3	100	68.571	ENSSTOG00000003504	WDR3	98	68.723	Ictidomys_tridecemlineatus
ENSTRUG00000002727	wdr3	100	67.545	ENSJJAG00000013861	Wdr3	99	67.619	Jaculus_jaculus
ENSTRUG00000002727	wdr3	100	81.626	ENSKMAG00000016004	wdr3	99	83.705	Kryptolebias_marmoratus
ENSTRUG00000002727	wdr3	100	80.255	ENSLBEG00000013757	wdr3	100	80.042	Labrus_bergylta
ENSTRUG00000002727	wdr3	98	64.056	ENSLACG00000014259	WDR3	98	64.056	Latimeria_chalumnae
ENSTRUG00000002727	wdr3	100	72.747	ENSLOCG00000011052	wdr3	100	72.641	Lepisosteus_oculatus
ENSTRUG00000002727	wdr3	99	68.008	ENSLAFG00000012108	WDR3	99	67.903	Loxodonta_africana
ENSTRUG00000002727	wdr3	100	68.148	ENSMFAG00000034570	WDR3	99	67.903	Macaca_fascicularis
ENSTRUG00000002727	wdr3	100	68.042	ENSMMUG00000008513	WDR3	99	67.797	Macaca_mulatta
ENSTRUG00000002727	wdr3	100	68.148	ENSMNEG00000039555	WDR3	99	67.903	Macaca_nemestrina
ENSTRUG00000002727	wdr3	100	68.042	ENSMLEG00000035516	WDR3	99	67.797	Mandrillus_leucophaeus
ENSTRUG00000002727	wdr3	100	79.724	ENSMAMG00000020737	wdr3	100	79.427	Mastacembelus_armatus
ENSTRUG00000002727	wdr3	100	80.741	ENSMZEG00005019253	wdr3	100	80.000	Maylandia_zebra
ENSTRUG00000002727	wdr3	98	66.567	ENSMGAG00000014241	WDR3	97	62.882	Meleagris_gallopavo
ENSTRUG00000002727	wdr3	99	67.373	ENSMAUG00000002574	Wdr3	99	67.338	Mesocricetus_auratus
ENSTRUG00000002727	wdr3	100	68.288	ENSMICG00000001783	WDR3	100	68.076	Microcebus_murinus
ENSTRUG00000002727	wdr3	99	68.148	ENSMOCG00000014361	Wdr3	99	67.797	Microtus_ochrogaster
ENSTRUG00000002727	wdr3	100	80.485	ENSMMOG00000019419	wdr3	100	80.485	Mola_mola
ENSTRUG00000002727	wdr3	100	66.984	ENSMODG00000005243	WDR3	100	66.561	Monodelphis_domestica
ENSTRUG00000002727	wdr3	99	75.345	ENSMALG00000016265	wdr3	99	74.497	Monopterus_albus
ENSTRUG00000002727	wdr3	99	68.042	MGP_CAROLIEiJ_G0025421	Wdr3	99	68.008	Mus_caroli
ENSTRUG00000002727	wdr3	99	68.042	ENSMUSG00000033285	Wdr3	99	67.513	Mus_musculus
ENSTRUG00000002727	wdr3	99	68.042	MGP_PahariEiJ_G0026865	Wdr3	99	67.513	Mus_pahari
ENSTRUG00000002727	wdr3	99	67.831	MGP_SPRETEiJ_G0026371	Wdr3	99	67.302	Mus_spretus
ENSTRUG00000002727	wdr3	99	68.153	ENSMPUG00000001565	WDR3	98	68.364	Mustela_putorius_furo
ENSTRUG00000002727	wdr3	99	67.903	ENSMLUG00000003500	WDR3	99	67.585	Myotis_lucifugus
ENSTRUG00000002727	wdr3	100	67.479	ENSNGAG00000021117	Wdr3	99	67.232	Nannospalax_galili
ENSTRUG00000002727	wdr3	100	75.928	ENSNBRG00000015140	wdr3	100	75.716	Neolamprologus_brichardi
ENSTRUG00000002727	wdr3	100	67.831	ENSNLEG00000005304	WDR3	99	67.585	Nomascus_leucogenys
ENSTRUG00000002727	wdr3	95	81.034	ENSMEUG00000009673	WDR3	80	81.034	Notamacropus_eugenii
ENSTRUG00000002727	wdr3	99	61.522	ENSOPRG00000001857	WDR3	99	61.099	Ochotona_princeps
ENSTRUG00000002727	wdr3	93	69.600	ENSODEG00000000136	WDR3	100	69.486	Octodon_degus
ENSTRUG00000002727	wdr3	100	85.244	ENSONIG00000015678	wdr3	100	85.244	Oreochromis_niloticus
ENSTRUG00000002727	wdr3	98	67.749	ENSOANG00000003070	WDR3	98	67.861	Ornithorhynchus_anatinus
ENSTRUG00000002727	wdr3	100	68.466	ENSOCUG00000007572	WDR3	99	68.326	Oryctolagus_cuniculus
ENSTRUG00000002727	wdr3	100	81.847	ENSORLG00020022391	wdr3	100	82.166	Oryzias_latipes_hni
ENSTRUG00000002727	wdr3	100	82.484	ENSORLG00015023208	wdr3	100	82.484	Oryzias_latipes_hsok
ENSTRUG00000002727	wdr3	100	83.015	ENSOMEG00000017592	wdr3	100	83.015	Oryzias_melastigma
ENSTRUG00000002727	wdr3	100	68.571	ENSOGAG00000007399	WDR3	99	68.432	Otolemur_garnettii
ENSTRUG00000002727	wdr3	100	68.110	ENSOARG00000020325	WDR3	99	67.865	Ovis_aries
ENSTRUG00000002727	wdr3	100	68.148	ENSPPAG00000029068	WDR3	99	67.903	Pan_paniscus
ENSTRUG00000002727	wdr3	99	68.611	ENSPPRG00000022972	WDR3	98	68.723	Panthera_pardus
ENSTRUG00000002727	wdr3	99	68.399	ENSPTIG00000016747	WDR3	98	68.506	Panthera_tigris_altaica
ENSTRUG00000002727	wdr3	100	68.148	ENSPTRG00000001168	WDR3	99	67.903	Pan_troglodytes
ENSTRUG00000002727	wdr3	100	68.148	ENSPANG00000020680	WDR3	99	67.903	Papio_anubis
ENSTRUG00000002727	wdr3	100	76.377	ENSPKIG00000024900	wdr3	100	76.483	Paramormyrops_kingsleyae
ENSTRUG00000002727	wdr3	99	67.869	ENSPSIG00000017455	WDR3	99	67.762	Pelodiscus_sinensis
ENSTRUG00000002727	wdr3	98	80.456	ENSPMGG00000022686	wdr3	99	79.176	Periophthalmus_magnuspinnatus
ENSTRUG00000002727	wdr3	99	67.479	ENSPEMG00000011928	Wdr3	99	67.550	Peromyscus_maniculatus_bairdii
ENSTRUG00000002727	wdr3	95	67.746	ENSPCIG00000000938	WDR3	99	67.562	Phascolarctos_cinereus
ENSTRUG00000002727	wdr3	100	83.157	ENSPFOG00000017900	wdr3	100	83.263	Poecilia_formosa
ENSTRUG00000002727	wdr3	100	83.245	ENSPLAG00000014362	wdr3	100	83.351	Poecilia_latipinna
ENSTRUG00000002727	wdr3	100	68.008	ENSPPYG00000000970	WDR3	99	67.975	Pongo_abelii
ENSTRUG00000002727	wdr3	92	55.658	ENSPCAG00000001265	WDR3	99	55.312	Procavia_capensis
ENSTRUG00000002727	wdr3	100	79.958	ENSPNYG00000006217	wdr3	100	79.215	Pundamilia_nyererei
ENSTRUG00000002727	wdr3	100	77.542	ENSPNAG00000006843	wdr3	99	77.282	Pygocentrus_nattereri
ENSTRUG00000002727	wdr3	99	67.196	ENSRNOG00000019670	Wdr3	99	66.667	Rattus_norvegicus
ENSTRUG00000002727	wdr3	99	67.987	ENSRBIG00000039149	WDR3	97	67.243	Rhinopithecus_bieti
ENSTRUG00000002727	wdr3	100	67.725	ENSRROG00000028066	WDR3	99	68.121	Rhinopithecus_roxellana
ENSTRUG00000002727	wdr3	99	36.546	YLR129W	DIP2	98	36.708	Saccharomyces_cerevisiae
ENSTRUG00000002727	wdr3	100	67.937	ENSSBOG00000015569	WDR3	100	67.619	Saimiri_boliviensis_boliviensis
ENSTRUG00000002727	wdr3	99	66.280	ENSSHAG00000005169	WDR3	98	66.738	Sarcophilus_harrisii
ENSTRUG00000002727	wdr3	100	75.610	ENSSFOG00015000595	wdr3	100	75.822	Scleropages_formosus
ENSTRUG00000002727	wdr3	100	82.857	ENSSMAG00000008334	wdr3	100	83.598	Scophthalmus_maximus
ENSTRUG00000002727	wdr3	100	84.926	ENSSDUG00000014276	wdr3	100	84.926	Seriola_dumerili
ENSTRUG00000002727	wdr3	100	82.397	ENSSLDG00000012837	wdr3	100	82.291	Seriola_lalandi_dorsalis
ENSTRUG00000002727	wdr3	98	61.851	ENSSARG00000002347	WDR3	99	61.738	Sorex_araneus
ENSTRUG00000002727	wdr3	98	63.568	ENSSPUG00000005582	WDR3	98	63.449	Sphenodon_punctatus
ENSTRUG00000002727	wdr3	100	67.937	ENSSSCG00000006727	WDR3	98	67.965	Sus_scrofa
ENSTRUG00000002727	wdr3	98	66.883	ENSTGUG00000013357	WDR3	98	66.775	Taeniopygia_guttata
ENSTRUG00000002727	wdr3	98	85.590	ENSTNIG00000005299	wdr3	98	85.606	Tetraodon_nigroviridis
ENSTRUG00000002727	wdr3	80	73.438	ENSTBEG00000002549	WDR3	66	73.438	Tupaia_belangeri
ENSTRUG00000002727	wdr3	99	60.911	ENSTTRG00000003817	WDR3	99	60.593	Tursiops_truncatus
ENSTRUG00000002727	wdr3	99	64.687	ENSUAMG00000023139	WDR3	98	64.610	Ursus_americanus
ENSTRUG00000002727	wdr3	90	66.374	ENSVPAG00000000073	WDR3	89	66.082	Vicugna_pacos
ENSTRUG00000002727	wdr3	99	68.717	ENSVVUG00000010629	WDR3	98	68.723	Vulpes_vulpes
ENSTRUG00000002727	wdr3	98	67.927	ENSXETG00000009920	wdr3	98	67.927	Xenopus_tropicalis
ENSTRUG00000002727	wdr3	100	82.927	ENSXMAG00000009827	wdr3	100	83.139	Xiphophorus_maculatus