EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000002818 (Gene tree)
Gene ID: 101072935
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 11170 bases
Position: chr14:4439330-4450499
Accession: 101072935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000006560	Exo_endo_phos	PF03372.23	2.3e-21	1	1
ENSTRUP00000057304	Exo_endo_phos	PF03372.23	2.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000006602	-	5648	XM_011610648	ENSTRUP00000006560	556 (aa)	XP_011608950	H2S2D9
ENSTRUT00000057099	-	5944	XM_003970367	ENSTRUP00000057304	556 (aa)	XP_003970416	UPI0005D22A6F

Gene Model

Click here to download ENSTRUG00000002818's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000002818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000002818	cnot6b	100	72.906	ENSTRUG00000004332	cnot6l	100	72.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000002818	cnot6b	100	84.022	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSTRUG00000002818	cnot6b	100	93.560	ENSAPOG00000009994	cnot6b	100	93.560	Acanthochromis_polyacanthus
ENSTRUG00000002818	cnot6b	100	84.079	ENSAMEG00000000949	CNOT6	99	84.079	Ailuropoda_melanoleuca
ENSTRUG00000002818	cnot6b	100	90.877	ENSACIG00000016566	cnot6b	100	90.877	Amphilophus_citrinellus
ENSTRUG00000002818	cnot6b	100	93.560	ENSAOCG00000006893	cnot6b	100	93.560	Amphiprion_ocellaris
ENSTRUG00000002818	cnot6b	100	93.560	ENSAPEG00000016949	cnot6b	100	93.560	Amphiprion_percula
ENSTRUG00000002818	cnot6b	100	90.698	ENSATEG00000007862	cnot6b	100	90.698	Anabas_testudineus
ENSTRUG00000002818	cnot6b	100	84.740	ENSAPLG00000012715	CNOT6	99	84.740	Anas_platyrhynchos
ENSTRUG00000002818	cnot6b	100	84.560	ENSACAG00000016548	CNOT6	100	84.560	Anolis_carolinensis
ENSTRUG00000002818	cnot6b	100	84.201	ENSANAG00000030436	CNOT6	96	84.201	Aotus_nancymaae
ENSTRUG00000002818	cnot6b	100	90.698	ENSACLG00000008279	cnot6b	100	91.234	Astatotilapia_calliptera
ENSTRUG00000002818	cnot6b	100	87.814	ENSAMXG00000019140	cnot6a	100	87.814	Astyanax_mexicanus
ENSTRUG00000002818	cnot6b	100	86.201	ENSAMXG00000034694	cnot6b	100	86.201	Astyanax_mexicanus
ENSTRUG00000002818	cnot6b	100	84.381	ENSBTAG00000017362	CNOT6	100	84.381	Bos_taurus
ENSTRUG00000002818	cnot6b	100	83.842	ENSCJAG00000009795	CNOT6	100	83.842	Callithrix_jacchus
ENSTRUG00000002818	cnot6b	100	84.381	ENSCAFG00000000464	CNOT6	100	84.381	Canis_familiaris
ENSTRUG00000002818	cnot6b	100	84.381	ENSCAFG00020002441	CNOT6	100	84.381	Canis_lupus_dingo
ENSTRUG00000002818	cnot6b	100	84.381	ENSCHIG00000019100	CNOT6	100	84.381	Capra_hircus
ENSTRUG00000002818	cnot6b	100	83.483	ENSTSYG00000003982	CNOT6	100	83.483	Carlito_syrichta
ENSTRUG00000002818	cnot6b	100	79.354	ENSCPOG00000035657	CNOT6	100	79.354	Cavia_porcellus
ENSTRUG00000002818	cnot6b	100	79.533	ENSCCAG00000033670	CNOT6	100	79.533	Cebus_capucinus
ENSTRUG00000002818	cnot6b	100	84.022	ENSCATG00000042014	CNOT6	100	84.022	Cercocebus_atys
ENSTRUG00000002818	cnot6b	100	82.944	ENSCLAG00000010489	CNOT6	100	82.944	Chinchilla_lanigera
ENSTRUG00000002818	cnot6b	100	84.022	ENSCSAG00000008165	CNOT6	100	84.022	Chlorocebus_sabaeus
ENSTRUG00000002818	cnot6b	100	83.662	ENSCHOG00000009680	CNOT6	100	83.662	Choloepus_hoffmanni
ENSTRUG00000002818	cnot6b	100	85.099	ENSCPBG00000008908	CNOT6	100	85.099	Chrysemys_picta_bellii
ENSTRUG00000002818	cnot6b	100	84.201	ENSCANG00000026756	CNOT6	100	84.201	Colobus_angolensis_palliatus
ENSTRUG00000002818	cnot6b	100	82.585	ENSCGRG00001011452	Cnot6	100	82.585	Cricetulus_griseus_chok1gshd
ENSTRUG00000002818	cnot6b	100	80.610	ENSCGRG00000010407	Cnot6	100	80.610	Cricetulus_griseus_crigri
ENSTRUG00000002818	cnot6b	100	93.023	ENSCSEG00000010939	cnot6b	100	93.023	Cynoglossus_semilaevis
ENSTRUG00000002818	cnot6b	100	93.011	ENSCVAG00000010538	cnot6b	100	93.011	Cyprinodon_variegatus
ENSTRUG00000002818	cnot6b	100	86.559	ENSDARG00000008255	cnot6a	100	86.559	Danio_rerio
ENSTRUG00000002818	cnot6b	100	86.201	ENSDARG00000101072	cnot6b	100	86.201	Danio_rerio
ENSTRUG00000002818	cnot6b	100	84.919	ENSDNOG00000041644	CNOT6	100	84.919	Dasypus_novemcinctus
ENSTRUG00000002818	cnot6b	100	75.763	ENSDORG00000001708	Cnot6	100	75.763	Dipodomys_ordii
ENSTRUG00000002818	cnot6b	100	67.084	ENSETEG00000006975	CNOT6	100	67.084	Echinops_telfairi
ENSTRUG00000002818	cnot6b	90	79.000	ENSEASG00005012957	-	99	79.000	Equus_asinus_asinus
ENSTRUG00000002818	cnot6b	100	84.201	ENSEASG00005012794	-	100	84.201	Equus_asinus_asinus
ENSTRUG00000002818	cnot6b	100	79.533	ENSECAG00000012704	-	99	79.533	Equus_caballus
ENSTRUG00000002818	cnot6b	100	84.740	ENSECAG00000019325	CNOT6	100	84.740	Equus_caballus
ENSTRUG00000002818	cnot6b	100	83.842	ENSEEUG00000015382	CNOT6	100	83.842	Erinaceus_europaeus
ENSTRUG00000002818	cnot6b	100	85.125	ENSELUG00000024580	cnot6a	100	85.125	Esox_lucius
ENSTRUG00000002818	cnot6b	100	85.362	ENSELUG00000015981	cnot6b	99	85.062	Esox_lucius
ENSTRUG00000002818	cnot6b	100	84.560	ENSFCAG00000001881	CNOT6	100	84.560	Felis_catus
ENSTRUG00000002818	cnot6b	100	84.919	ENSFALG00000007699	CNOT6	100	84.919	Ficedula_albicollis
ENSTRUG00000002818	cnot6b	100	82.585	ENSFDAG00000001999	CNOT6	100	82.585	Fukomys_damarensis
ENSTRUG00000002818	cnot6b	68	90.596	ENSFHEG00000013756	cnot6b	99	90.596	Fundulus_heteroclitus
ENSTRUG00000002818	cnot6b	95	90.170	ENSGMOG00000009767	cnot6b	99	90.170	Gadus_morhua
ENSTRUG00000002818	cnot6b	100	84.740	ENSGALG00000034316	CNOT6	100	84.740	Gallus_gallus
ENSTRUG00000002818	cnot6b	100	92.832	ENSGAFG00000008525	cnot6b	100	92.832	Gambusia_affinis
ENSTRUG00000002818	cnot6b	95	89.792	ENSGACG00000018046	cnot6b	99	89.792	Gasterosteus_aculeatus
ENSTRUG00000002818	cnot6b	100	70.072	ENSGAGG00000012176	CNOT6	100	70.072	Gopherus_agassizii
ENSTRUG00000002818	cnot6b	100	84.022	ENSGGOG00000003675	CNOT6	100	84.022	Gorilla_gorilla
ENSTRUG00000002818	cnot6b	100	90.877	ENSHBUG00000002819	cnot6b	100	91.413	Haplochromis_burtoni
ENSTRUG00000002818	cnot6b	100	82.944	ENSHGLG00000017756	CNOT6	100	82.944	Heterocephalus_glaber_female
ENSTRUG00000002818	cnot6b	100	82.944	ENSHGLG00100005747	CNOT6	100	82.944	Heterocephalus_glaber_male
ENSTRUG00000002818	cnot6b	100	90.340	ENSHCOG00000016176	cnot6b	100	90.877	Hippocampus_comes
ENSTRUG00000002818	cnot6b	100	87.276	ENSIPUG00000019831	cnot6a	100	87.276	Ictalurus_punctatus
ENSTRUG00000002818	cnot6b	100	86.738	ENSIPUG00000017482	cnot6b	100	86.738	Ictalurus_punctatus
ENSTRUG00000002818	cnot6b	100	84.022	ENSSTOG00000002803	CNOT6	100	84.022	Ictidomys_tridecemlineatus
ENSTRUG00000002818	cnot6b	100	83.124	ENSJJAG00000012296	Cnot6	100	83.124	Jaculus_jaculus
ENSTRUG00000002818	cnot6b	100	93.190	ENSKMAG00000004640	cnot6b	100	93.190	Kryptolebias_marmoratus
ENSTRUG00000002818	cnot6b	100	91.055	ENSLBEG00000027917	cnot6b	100	91.592	Labrus_bergylta
ENSTRUG00000002818	cnot6b	100	90.143	ENSLOCG00000010102	cnot6b	99	90.143	Lepisosteus_oculatus
ENSTRUG00000002818	cnot6b	100	84.740	ENSLAFG00000016742	CNOT6	100	84.740	Loxodonta_africana
ENSTRUG00000002818	cnot6b	100	84.022	ENSMFAG00000030867	CNOT6	100	84.022	Macaca_fascicularis
ENSTRUG00000002818	cnot6b	100	84.022	ENSMMUG00000018690	CNOT6	100	84.022	Macaca_mulatta
ENSTRUG00000002818	cnot6b	100	84.022	ENSMNEG00000038565	CNOT6	100	84.022	Macaca_nemestrina
ENSTRUG00000002818	cnot6b	100	84.022	ENSMLEG00000010555	CNOT6	100	84.022	Mandrillus_leucophaeus
ENSTRUG00000002818	cnot6b	100	93.918	ENSMAMG00000007515	cnot6b	100	93.918	Mastacembelus_armatus
ENSTRUG00000002818	cnot6b	100	90.698	ENSMZEG00005012899	cnot6b	100	91.234	Maylandia_zebra
ENSTRUG00000002818	cnot6b	100	83.303	ENSMAUG00000019798	Cnot6	100	83.303	Mesocricetus_auratus
ENSTRUG00000002818	cnot6b	100	82.226	ENSMICG00000013018	-	100	82.226	Microcebus_murinus
ENSTRUG00000002818	cnot6b	98	76.103	ENSMICG00000028378	-	99	76.103	Microcebus_murinus
ENSTRUG00000002818	cnot6b	100	83.303	ENSMOCG00000021662	Cnot6	100	83.303	Microtus_ochrogaster
ENSTRUG00000002818	cnot6b	100	91.398	ENSMMOG00000003227	cnot6b	100	91.398	Mola_mola
ENSTRUG00000002818	cnot6b	100	84.201	ENSMODG00000003979	CNOT6	100	84.201	Monodelphis_domestica
ENSTRUG00000002818	cnot6b	100	93.381	ENSMALG00000014251	cnot6b	100	93.381	Monopterus_albus
ENSTRUG00000002818	cnot6b	100	83.483	MGP_CAROLIEiJ_G0016277	Cnot6	100	83.483	Mus_caroli
ENSTRUG00000002818	cnot6b	100	83.483	ENSMUSG00000020362	Cnot6	100	83.483	Mus_musculus
ENSTRUG00000002818	cnot6b	100	83.483	MGP_PahariEiJ_G0017413	Cnot6	100	83.483	Mus_pahari
ENSTRUG00000002818	cnot6b	100	83.303	MGP_SPRETEiJ_G0017122	Cnot6	100	83.303	Mus_spretus
ENSTRUG00000002818	cnot6b	100	84.381	ENSMPUG00000000587	CNOT6	96	84.381	Mustela_putorius_furo
ENSTRUG00000002818	cnot6b	100	83.274	ENSMLUG00000010257	CNOT6	100	83.274	Myotis_lucifugus
ENSTRUG00000002818	cnot6b	100	82.944	ENSNGAG00000008269	Cnot6	100	82.944	Nannospalax_galili
ENSTRUG00000002818	cnot6b	100	90.877	ENSNBRG00000010798	cnot6b	100	91.413	Neolamprologus_brichardi
ENSTRUG00000002818	cnot6b	100	82.944	ENSNLEG00000002322	CNOT6	100	82.944	Nomascus_leucogenys
ENSTRUG00000002818	cnot6b	81	79.439	ENSMEUG00000000025	CNOT6	81	79.439	Notamacropus_eugenii
ENSTRUG00000002818	cnot6b	88	85.442	ENSOPRG00000008244	-	88	85.442	Ochotona_princeps
ENSTRUG00000002818	cnot6b	100	82.226	ENSODEG00000007041	CNOT6	100	82.226	Octodon_degus
ENSTRUG00000002818	cnot6b	75	91.253	ENSONIG00000013027	cnot6b	99	91.253	Oreochromis_niloticus
ENSTRUG00000002818	cnot6b	100	84.740	ENSOANG00000010226	CNOT6	100	84.740	Ornithorhynchus_anatinus
ENSTRUG00000002818	cnot6b	100	83.005	ENSOCUG00000011083	CNOT6	100	83.005	Oryctolagus_cuniculus
ENSTRUG00000002818	cnot6b	100	92.487	ENSORLG00000005059	cnot6b	100	92.487	Oryzias_latipes
ENSTRUG00000002818	cnot6b	100	92.487	ENSORLG00020012784	cnot6b	100	92.487	Oryzias_latipes_hni
ENSTRUG00000002818	cnot6b	94	91.778	ENSORLG00015022658	cnot6b	98	91.778	Oryzias_latipes_hsok
ENSTRUG00000002818	cnot6b	100	93.023	ENSOMEG00000005295	cnot6b	100	93.023	Oryzias_melastigma
ENSTRUG00000002818	cnot6b	94	83.015	ENSOGAG00000032470	CNOT6	100	83.015	Otolemur_garnettii
ENSTRUG00000002818	cnot6b	97	83.764	ENSOARG00000001003	CNOT6	100	83.764	Ovis_aries
ENSTRUG00000002818	cnot6b	100	84.022	ENSPPAG00000032253	CNOT6	100	84.022	Pan_paniscus
ENSTRUG00000002818	cnot6b	100	84.381	ENSPPRG00000011912	CNOT6	100	84.381	Panthera_pardus
ENSTRUG00000002818	cnot6b	100	84.381	ENSPTIG00000016794	CNOT6	100	84.381	Panthera_tigris_altaica
ENSTRUG00000002818	cnot6b	100	84.022	ENSPTRG00000017636	CNOT6	100	84.022	Pan_troglodytes
ENSTRUG00000002818	cnot6b	100	84.022	ENSPANG00000016191	CNOT6	100	84.022	Papio_anubis
ENSTRUG00000002818	cnot6b	100	88.710	ENSPKIG00000021368	cnot6b	100	88.710	Paramormyrops_kingsleyae
ENSTRUG00000002818	cnot6b	98	84.743	ENSPSIG00000017307	CNOT6	100	84.743	Pelodiscus_sinensis
ENSTRUG00000002818	cnot6b	100	91.950	ENSPMGG00000011238	cnot6b	100	91.950	Periophthalmus_magnuspinnatus
ENSTRUG00000002818	cnot6b	100	82.765	ENSPEMG00000000627	Cnot6	100	82.765	Peromyscus_maniculatus_bairdii
ENSTRUG00000002818	cnot6b	100	84.381	ENSPCIG00000020319	CNOT6	99	84.381	Phascolarctos_cinereus
ENSTRUG00000002818	cnot6b	100	93.190	ENSPFOG00000006291	cnot6b	100	93.190	Poecilia_formosa
ENSTRUG00000002818	cnot6b	100	89.427	ENSPLAG00000008266	cnot6b	100	89.427	Poecilia_latipinna
ENSTRUG00000002818	cnot6b	100	93.369	ENSPMEG00000009091	cnot6b	100	93.369	Poecilia_mexicana
ENSTRUG00000002818	cnot6b	100	91.756	ENSPREG00000003713	cnot6b	100	91.756	Poecilia_reticulata
ENSTRUG00000002818	cnot6b	100	84.022	ENSPPYG00000016137	CNOT6	100	84.022	Pongo_abelii
ENSTRUG00000002818	cnot6b	71	80.075	ENSPCAG00000005599	-	71	80.075	Procavia_capensis
ENSTRUG00000002818	cnot6b	100	78.276	ENSPCOG00000017359	CNOT6	100	78.995	Propithecus_coquereli
ENSTRUG00000002818	cnot6b	100	81.149	ENSPVAG00000003069	CNOT6	100	81.149	Pteropus_vampyrus
ENSTRUG00000002818	cnot6b	100	90.519	ENSPNYG00000000321	cnot6b	100	91.055	Pundamilia_nyererei
ENSTRUG00000002818	cnot6b	100	87.276	ENSPNAG00000028816	cnot6b	100	87.276	Pygocentrus_nattereri
ENSTRUG00000002818	cnot6b	100	87.993	ENSPNAG00000029586	cnot6a	100	87.993	Pygocentrus_nattereri
ENSTRUG00000002818	cnot6b	100	82.944	ENSRNOG00000054891	Cnot6	100	82.944	Rattus_norvegicus
ENSTRUG00000002818	cnot6b	100	83.842	ENSRBIG00000004309	CNOT6	100	83.842	Rhinopithecus_bieti
ENSTRUG00000002818	cnot6b	100	83.842	ENSRROG00000035378	CNOT6	100	83.842	Rhinopithecus_roxellana
ENSTRUG00000002818	cnot6b	100	84.201	ENSSBOG00000030494	CNOT6	100	84.201	Saimiri_boliviensis_boliviensis
ENSTRUG00000002818	cnot6b	100	84.201	ENSSHAG00000017436	CNOT6	100	84.201	Sarcophilus_harrisii
ENSTRUG00000002818	cnot6b	100	87.634	ENSSFOG00015022383	cnot6a	96	87.634	Scleropages_formosus
ENSTRUG00000002818	cnot6b	100	89.247	ENSSFOG00015015133	CNOT6	100	89.247	Scleropages_formosus
ENSTRUG00000002818	cnot6b	100	92.129	ENSSMAG00000003084	cnot6b	100	92.129	Scophthalmus_maximus
ENSTRUG00000002818	cnot6b	100	93.739	ENSSDUG00000004151	cnot6b	100	93.739	Seriola_dumerili
ENSTRUG00000002818	cnot6b	100	93.023	ENSSLDG00000004448	cnot6b	100	93.560	Seriola_lalandi_dorsalis
ENSTRUG00000002818	cnot6b	64	66.201	ENSSARG00000012650	-	100	66.201	Sorex_araneus
ENSTRUG00000002818	cnot6b	100	85.099	ENSSPUG00000007893	CNOT6	100	85.099	Sphenodon_punctatus
ENSTRUG00000002818	cnot6b	100	93.739	ENSSPAG00000000149	cnot6b	100	93.739	Stegastes_partitus
ENSTRUG00000002818	cnot6b	100	84.201	ENSSSCG00000014009	CNOT6	100	84.201	Sus_scrofa
ENSTRUG00000002818	cnot6b	100	84.560	ENSTGUG00000001119	CNOT6	100	84.560	Taeniopygia_guttata
ENSTRUG00000002818	cnot6b	100	98.381	ENSTNIG00000004443	cnot6b	99	98.381	Tetraodon_nigroviridis
ENSTRUG00000002818	cnot6b	76	76.119	ENSTBEG00000017094	-	87	76.119	Tupaia_belangeri
ENSTRUG00000002818	cnot6b	100	84.201	ENSTTRG00000009363	CNOT6	100	84.201	Tursiops_truncatus
ENSTRUG00000002818	cnot6b	90	73.307	ENSUAMG00000004579	CNOT6	99	73.307	Ursus_americanus
ENSTRUG00000002818	cnot6b	100	80.308	ENSUMAG00000024577	CNOT6	100	80.308	Ursus_maritimus
ENSTRUG00000002818	cnot6b	83	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSTRUG00000002818	cnot6b	100	84.381	ENSVVUG00000026940	CNOT6	100	84.381	Vulpes_vulpes
ENSTRUG00000002818	cnot6b	100	89.785	ENSXCOG00000003360	cnot6b	100	89.785	Xiphophorus_couchianus
ENSTRUG00000002818	cnot6b	100	93.369	ENSXMAG00000008730	cnot6b	100	93.369	Xiphophorus_maculatus