EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000002893 (Gene tree)
Gene ID: 101075125
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9021 bases
Position: chrHE592852.1:1507-10527
Accession: 101075125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000006758	Tudor-knot	PF11717.8	9.2e-11	1	1
ENSTRUP00000006756	Tudor-knot	PF11717.8	9.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000006805	-	4403	-	ENSTRUP00000006760	854 (aa)	-	H2S2Y8
ENSTRUT00000006804	-	4379	-	ENSTRUP00000006759	846 (aa)	-	H2S2Y7
ENSTRUT00000006803	-	4514	XM_011620575	ENSTRUP00000006758	891 (aa)	XP_011618877	H2S2Y6
ENSTRUT00000006801	-	4586	-	ENSTRUP00000006756	915 (aa)	-	H2S2Y4

Gene Model

Click here to download ENSTRUG00000002893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000002893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000002893	tomm20a	85	45.253	ENSG00000054267	ARID4B	98	38.571	Homo_sapiens
ENSTRUG00000002893	tomm20a	100	76.264	ENSAPOG00000010823	tomm20a	69	76.180	Acanthochromis_polyacanthus
ENSTRUG00000002893	tomm20a	85	44.647	ENSAMEG00000008801	ARID4B	56	45.891	Ailuropoda_melanoleuca
ENSTRUG00000002893	tomm20a	90	69.004	ENSACIG00000006313	tomm20a	65	72.325	Amphilophus_citrinellus
ENSTRUG00000002893	tomm20a	100	75.495	ENSAOCG00000003330	tomm20a	69	75.714	Amphiprion_ocellaris
ENSTRUG00000002893	tomm20a	100	75.275	ENSAPEG00000024018	tomm20a	69	75.495	Amphiprion_percula
ENSTRUG00000002893	tomm20a	100	74.370	ENSATEG00000014930	tomm20a	69	74.561	Anabas_testudineus
ENSTRUG00000002893	tomm20a	86	45.864	ENSAPLG00000004422	ARID4B	55	45.932	Anas_platyrhynchos
ENSTRUG00000002893	tomm20a	86	44.623	ENSACAG00000001289	ARID4B	56	46.193	Anolis_carolinensis
ENSTRUG00000002893	tomm20a	85	43.873	ENSANAG00000038088	ARID4B	56	45.802	Aotus_nancymaae
ENSTRUG00000002893	tomm20a	87	73.018	ENSACLG00000023521	tomm20a	67	74.041	Astatotilapia_calliptera
ENSTRUG00000002893	tomm20a	65	83.178	ENSAMXG00000003657	tomm20a	61	54.646	Astyanax_mexicanus
ENSTRUG00000002893	tomm20a	85	45.309	ENSBTAG00000000222	ARID4B	56	45.987	Bos_taurus
ENSTRUG00000002893	tomm20a	85	43.888	ENSCJAG00000018055	ARID4B	56	45.802	Callithrix_jacchus
ENSTRUG00000002893	tomm20a	85	44.836	ENSCAFG00000011439	ARID4B	56	46.465	Canis_familiaris
ENSTRUG00000002893	tomm20a	85	45.993	ENSCAFG00020027130	ARID4B	56	46.591	Canis_lupus_dingo
ENSTRUG00000002893	tomm20a	85	46.848	ENSCHIG00000020742	ARID4B	57	46.397	Capra_hircus
ENSTRUG00000002893	tomm20a	85	43.797	ENSCPOG00000034766	ARID4B	55	44.911	Cavia_porcellus
ENSTRUG00000002893	tomm20a	85	43.995	ENSCCAG00000021520	ARID4B	56	45.929	Cebus_capucinus
ENSTRUG00000002893	tomm20a	85	44.608	ENSCATG00000042166	ARID4B	56	45.949	Cercocebus_atys
ENSTRUG00000002893	tomm20a	85	45.205	ENSCLAG00000003255	ARID4B	56	46.360	Chinchilla_lanigera
ENSTRUG00000002893	tomm20a	85	44.485	ENSCSAG00000010069	ARID4B	56	45.949	Chlorocebus_sabaeus
ENSTRUG00000002893	tomm20a	85	44.593	ENSCPBG00000004501	ARID4B	60	46.221	Chrysemys_picta_bellii
ENSTRUG00000002893	tomm20a	85	44.663	ENSCANG00000027498	ARID4B	58	46.203	Colobus_angolensis_palliatus
ENSTRUG00000002893	tomm20a	85	45.421	ENSCGRG00001014397	Arid4b	56	46.515	Cricetulus_griseus_chok1gshd
ENSTRUG00000002893	tomm20a	85	45.421	ENSCGRG00000004910	Arid4b	56	46.515	Cricetulus_griseus_crigri
ENSTRUG00000002893	tomm20a	93	68.618	ENSCSEG00000012928	tomm20a	69	68.268	Cynoglossus_semilaevis
ENSTRUG00000002893	tomm20a	100	66.887	ENSCVAG00000003244	tomm20a	69	68.207	Cyprinodon_variegatus
ENSTRUG00000002893	tomm20a	100	50.491	ENSDARG00000090656	tomm20a	66	51.848	Danio_rerio
ENSTRUG00000002893	tomm20a	85	45.353	ENSDNOG00000005711	ARID4B	98	46.203	Dasypus_novemcinctus
ENSTRUG00000002893	tomm20a	85	45.983	ENSDORG00000006422	Arid4b	56	46.058	Dipodomys_ordii
ENSTRUG00000002893	tomm20a	86	45.567	ENSETEG00000005596	ARID4B	57	45.743	Echinops_telfairi
ENSTRUG00000002893	tomm20a	85	43.851	ENSEASG00005000677	ARID4B	56	46.018	Equus_asinus_asinus
ENSTRUG00000002893	tomm20a	85	43.896	ENSECAG00000017836	ARID4B	55	46.018	Equus_caballus
ENSTRUG00000002893	tomm20a	70	52.288	ENSELUG00000018441	tomm20a	71	53.595	Esox_lucius
ENSTRUG00000002893	tomm20a	86	43.473	ENSFCAG00000030096	ARID4B	56	46.144	Felis_catus
ENSTRUG00000002893	tomm20a	85	44.294	ENSFALG00000013548	ARID4B	54	44.760	Ficedula_albicollis
ENSTRUG00000002893	tomm20a	85	45.241	ENSFDAG00000014194	ARID4B	56	46.056	Fukomys_damarensis
ENSTRUG00000002893	tomm20a	100	69.508	ENSFHEG00000003798	tomm20a	69	69.793	Fundulus_heteroclitus
ENSTRUG00000002893	tomm20a	78	66.667	ENSGMOG00000018747	tomm20a	59	72.941	Gadus_morhua
ENSTRUG00000002893	tomm20a	100	64.757	ENSGACG00000004298	tomm20a	68	66.811	Gasterosteus_aculeatus
ENSTRUG00000002893	tomm20a	86	45.189	ENSGAGG00000020544	ARID4B	57	46.020	Gopherus_agassizii
ENSTRUG00000002893	tomm20a	85	45.353	ENSGGOG00000022080	ARID4B	56	46.379	Gorilla_gorilla
ENSTRUG00000002893	tomm20a	100	72.558	ENSHBUG00000020369	tomm20a	69	73.216	Haplochromis_burtoni
ENSTRUG00000002893	tomm20a	85	45.926	ENSHGLG00000012546	ARID4B	56	45.881	Heterocephalus_glaber_female
ENSTRUG00000002893	tomm20a	85	45.926	ENSHGLG00100015436	ARID4B	56	45.881	Heterocephalus_glaber_male
ENSTRUG00000002893	tomm20a	100	65.835	ENSHCOG00000010376	tomm20a	80	65.124	Hippocampus_comes
ENSTRUG00000002893	tomm20a	92	53.699	ENSIPUG00000014234	arid4b	61	53.593	Ictalurus_punctatus
ENSTRUG00000002893	tomm20a	85	44.945	ENSSTOG00000002810	ARID4B	61	43.146	Ictidomys_tridecemlineatus
ENSTRUG00000002893	tomm20a	86	45.849	ENSJJAG00000021368	Arid4b	56	45.802	Jaculus_jaculus
ENSTRUG00000002893	tomm20a	85	68.846	ENSKMAG00000010987	tomm20a	65	70.155	Kryptolebias_marmoratus
ENSTRUG00000002893	tomm20a	85	45.129	ENSLAFG00000014295	ARID4B	56	46.193	Loxodonta_africana
ENSTRUG00000002893	tomm20a	85	44.676	ENSMFAG00000044016	ARID4B	56	45.949	Macaca_fascicularis
ENSTRUG00000002893	tomm20a	85	44.676	ENSMMUG00000007141	ARID4B	56	45.949	Macaca_mulatta
ENSTRUG00000002893	tomm20a	85	44.785	ENSMNEG00000014840	ARID4B	56	45.949	Macaca_nemestrina
ENSTRUG00000002893	tomm20a	85	44.676	ENSMLEG00000033583	ARID4B	56	45.949	Mandrillus_leucophaeus
ENSTRUG00000002893	tomm20a	90	71.585	ENSMAMG00000017134	tomm20a	66	71.498	Mastacembelus_armatus
ENSTRUG00000002893	tomm20a	100	72.448	ENSMZEG00005009879	tomm20a	69	73.106	Maylandia_zebra
ENSTRUG00000002893	tomm20a	86	45.668	ENSMICG00000016358	ARID4B	58	46.144	Microcebus_murinus
ENSTRUG00000002893	tomm20a	98	69.109	ENSMMOG00000000561	tomm20a	68	69.144	Mola_mola
ENSTRUG00000002893	tomm20a	86	45.012	ENSMODG00000008417	ARID4B	56	45.771	Monodelphis_domestica
ENSTRUG00000002893	tomm20a	100	74.336	ENSMALG00000005205	tomm20a	69	74.447	Monopterus_albus
ENSTRUG00000002893	tomm20a	85	45.074	MGP_CAROLIEiJ_G0018236	Arid4b	56	45.902	Mus_caroli
ENSTRUG00000002893	tomm20a	85	44.828	ENSMUSG00000039219	Arid4b	56	45.833	Mus_musculus
ENSTRUG00000002893	tomm20a	85	45.859	MGP_PahariEiJ_G0019286	Arid4b	56	46.709	Mus_pahari
ENSTRUG00000002893	tomm20a	85	44.704	MGP_SPRETEiJ_G0019094	Arid4b	63	42.244	Mus_spretus
ENSTRUG00000002893	tomm20a	85	46.059	ENSMPUG00000002906	ARID4B	56	46.338	Mustela_putorius_furo
ENSTRUG00000002893	tomm20a	86	44.645	ENSMLUG00000016232	ARID4B	56	46.827	Myotis_lucifugus
ENSTRUG00000002893	tomm20a	85	48.212	ENSNGAG00000014629	Arid4b	56	47.348	Nannospalax_galili
ENSTRUG00000002893	tomm20a	90	71.182	ENSNBRG00000019684	tomm20a	65	72.167	Neolamprologus_brichardi
ENSTRUG00000002893	tomm20a	86	43.976	ENSNLEG00000002665	ARID4B	56	46.506	Nomascus_leucogenys
ENSTRUG00000002893	tomm20a	85	45.556	ENSODEG00000005373	ARID4B	56	46.203	Octodon_degus
ENSTRUG00000002893	tomm20a	86	44.093	ENSOCUG00000006605	ARID4B	56	45.190	Oryctolagus_cuniculus
ENSTRUG00000002893	tomm20a	100	66.923	ENSORLG00000012510	tomm20a	69	66.630	Oryzias_latipes
ENSTRUG00000002893	tomm20a	87	65.605	ENSORLG00020013988	tomm20a	64	66.667	Oryzias_latipes_hni
ENSTRUG00000002893	tomm20a	87	64.841	ENSORLG00015022835	tomm20a	64	65.649	Oryzias_latipes_hsok
ENSTRUG00000002893	tomm20a	100	67.947	ENSOMEG00000000521	tomm20a	68	67.728	Oryzias_melastigma
ENSTRUG00000002893	tomm20a	86	39.490	ENSOGAG00000012476	ARID4B	53	41.923	Otolemur_garnettii
ENSTRUG00000002893	tomm20a	83	46.366	ENSOARG00000003481	ARID4B	59	44.614	Ovis_aries
ENSTRUG00000002893	tomm20a	85	45.409	ENSPPAG00000031651	ARID4B	56	46.760	Pan_paniscus
ENSTRUG00000002893	tomm20a	85	44.908	ENSPPRG00000013739	ARID4B	56	46.203	Panthera_pardus
ENSTRUG00000002893	tomm20a	85	45.912	ENSPTIG00000012520	ARID4B	55	47.021	Panthera_tigris_altaica
ENSTRUG00000002893	tomm20a	85	45.229	ENSPTRG00000002129	ARID4B	56	46.252	Pan_troglodytes
ENSTRUG00000002893	tomm20a	85	44.118	ENSPTRG00000048786	-	62	46.252	Pan_troglodytes
ENSTRUG00000002893	tomm20a	85	44.853	ENSPANG00000013611	ARID4B	56	45.949	Papio_anubis
ENSTRUG00000002893	tomm20a	86	45.422	ENSPSIG00000011632	ARID4B	60	45.601	Pelodiscus_sinensis
ENSTRUG00000002893	tomm20a	77	81.366	ENSPMGG00000001596	tomm20a	89	83.851	Periophthalmus_magnuspinnatus
ENSTRUG00000002893	tomm20a	86	44.734	ENSPCIG00000029756	ARID4B	59	45.823	Phascolarctos_cinereus
ENSTRUG00000002893	tomm20a	100	69.029	ENSPFOG00000019430	tomm20a	69	69.357	Poecilia_formosa
ENSTRUG00000002893	tomm20a	100	69.466	ENSPLAG00000010554	tomm20a	69	69.684	Poecilia_latipinna
ENSTRUG00000002893	tomm20a	100	68.627	ENSPMEG00000003093	tomm20a	67	68.954	Poecilia_mexicana
ENSTRUG00000002893	tomm20a	100	67.325	ENSPREG00000007996	tomm20a	69	69.147	Poecilia_reticulata
ENSTRUG00000002893	tomm20a	85	44.377	ENSPPYG00000000098	ARID4B	56	46.125	Pongo_abelii
ENSTRUG00000002893	tomm20a	85	45.117	ENSPCOG00000024328	ARID4B	56	46.329	Propithecus_coquereli
ENSTRUG00000002893	tomm20a	100	68.137	ENSPNYG00000013988	tomm20a	69	68.771	Pundamilia_nyererei
ENSTRUG00000002893	tomm20a	87	59.316	ENSPNAG00000000523	tomm20a	54	59.558	Pygocentrus_nattereri
ENSTRUG00000002893	tomm20a	85	44.828	ENSRNOG00000016391	LOC100912163	62	46.415	Rattus_norvegicus
ENSTRUG00000002893	tomm20a	85	39.509	ENSRBIG00000042029	ARID4B	52	40.590	Rhinopithecus_bieti
ENSTRUG00000002893	tomm20a	85	44.730	ENSRROG00000045203	ARID4B	56	46.018	Rhinopithecus_roxellana
ENSTRUG00000002893	tomm20a	85	44.049	ENSSBOG00000020196	ARID4B	67	46.056	Saimiri_boliviensis_boliviensis
ENSTRUG00000002893	tomm20a	86	44.118	ENSSHAG00000015214	ARID4B	56	45.823	Sarcophilus_harrisii
ENSTRUG00000002893	tomm20a	86	48.219	ENSSFOG00015008923	tomm20a	76	50.792	Scleropages_formosus
ENSTRUG00000002893	tomm20a	85	54.453	ENSSFOG00015000132	arid4b	57	54.628	Scleropages_formosus
ENSTRUG00000002893	tomm20a	100	70.085	ENSSMAG00000010430	tomm20a	70	71.261	Scophthalmus_maximus
ENSTRUG00000002893	tomm20a	100	76.101	ENSSDUG00000003019	tomm20a	69	76.101	Seriola_dumerili
ENSTRUG00000002893	tomm20a	85	46.716	ENSSPUG00000015466	ARID4B	55	46.447	Sphenodon_punctatus
ENSTRUG00000002893	tomm20a	100	74.945	ENSSPAG00000007358	tomm20a	69	74.587	Stegastes_partitus
ENSTRUG00000002893	tomm20a	85	45.043	ENSTGUG00000010246	ARID4B	56	45.129	Taeniopygia_guttata
ENSTRUG00000002893	tomm20a	86	47.912	ENSTTRG00000002228	ARID4B	56	46.591	Tursiops_truncatus
ENSTRUG00000002893	tomm20a	85	44.769	ENSUMAG00000006905	ARID4B	57	46.591	Ursus_maritimus
ENSTRUG00000002893	tomm20a	85	44.957	ENSVVUG00000008154	ARID4B	63	46.465	Vulpes_vulpes
ENSTRUG00000002893	tomm20a	87	43.674	ENSXETG00000024651	arid4b	55	43.147	Xenopus_tropicalis
ENSTRUG00000002893	tomm20a	100	67.991	ENSXMAG00000006538	tomm20a	69	69.604	Xiphophorus_maculatus