EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000002920 (Gene tree)
Gene ID: 101065053
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 8303 bases
Position: chr3:8963934-8972236
Accession: 101065053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000006811	PRP1_N	PF06424.12	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000006856	-	3379	XM_003963337	ENSTRUP00000006811	969 (aa)	XP_003963386	H2S339

Gene Model

Click here to download ENSTRUG00000002920's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000002920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000002920	prpf6	96	91.286	ENSG00000101161	PRPF6	100	90.861	Homo_sapiens
ENSTRUG00000002920	prpf6	100	96.904	ENSAPOG00000010395	prpf6	100	96.904	Acanthochromis_polyacanthus
ENSTRUG00000002920	prpf6	96	90.870	ENSAMEG00000001916	PRPF6	99	90.446	Ailuropoda_melanoleuca
ENSTRUG00000002920	prpf6	100	96.801	ENSACIG00000019862	prpf6	100	96.801	Amphilophus_citrinellus
ENSTRUG00000002920	prpf6	100	97.007	ENSAOCG00000012988	prpf6	100	97.007	Amphiprion_ocellaris
ENSTRUG00000002920	prpf6	96	91.075	ENSAPEG00000008301	prpf6	100	91.290	Amphiprion_percula
ENSTRUG00000002920	prpf6	100	96.491	ENSATEG00000005581	prpf6	100	96.491	Anabas_testudineus
ENSTRUG00000002920	prpf6	96	91.817	ENSACAG00000006464	PRPF6	95	91.392	Anolis_carolinensis
ENSTRUG00000002920	prpf6	96	91.498	ENSANAG00000012661	PRPF6	100	91.991	Aotus_nancymaae
ENSTRUG00000002920	prpf6	100	96.801	ENSACLG00000025875	prpf6	100	96.801	Astatotilapia_calliptera
ENSTRUG00000002920	prpf6	97	93.750	ENSAMXG00000001929	prpf6	100	91.906	Astyanax_mexicanus
ENSTRUG00000002920	prpf6	96	92.136	ENSBTAG00000011656	PRPF6	100	91.711	Bos_taurus
ENSTRUG00000002920	prpf6	96	91.498	ENSCJAG00000010616	PRPF6	100	91.073	Callithrix_jacchus
ENSTRUG00000002920	prpf6	96	91.923	ENSCAFG00000013165	PRPF6	100	91.498	Canis_familiaris
ENSTRUG00000002920	prpf6	96	91.923	ENSCAFG00020002050	PRPF6	100	91.498	Canis_lupus_dingo
ENSTRUG00000002920	prpf6	96	92.136	ENSCHIG00000018187	PRPF6	100	91.711	Capra_hircus
ENSTRUG00000002920	prpf6	96	91.923	ENSTSYG00000007814	PRPF6	100	91.498	Carlito_syrichta
ENSTRUG00000002920	prpf6	93	90.840	ENSCAPG00000015077	PRPF6	100	89.967	Cavia_aperea
ENSTRUG00000002920	prpf6	96	92.136	ENSCPOG00000007518	PRPF6	100	91.711	Cavia_porcellus
ENSTRUG00000002920	prpf6	96	88.417	ENSCCAG00000024564	PRPF6	100	87.991	Cebus_capucinus
ENSTRUG00000002920	prpf6	96	91.392	ENSCATG00000037473	PRPF6	100	90.967	Cercocebus_atys
ENSTRUG00000002920	prpf6	96	88.417	ENSCLAG00000003854	PRPF6	100	87.991	Chinchilla_lanigera
ENSTRUG00000002920	prpf6	96	86.800	ENSCSAG00000016742	PRPF6	100	86.378	Chlorocebus_sabaeus
ENSTRUG00000002920	prpf6	81	77.398	ENSCHOG00000003315	-	98	77.190	Choloepus_hoffmanni
ENSTRUG00000002920	prpf6	98	91.051	ENSCPBG00000013964	PRPF6	96	92.021	Chrysemys_picta_bellii
ENSTRUG00000002920	prpf6	96	72.622	ENSCING00000008817	-	99	72.199	Ciona_intestinalis
ENSTRUG00000002920	prpf6	96	91.180	ENSCANG00000038230	PRPF6	100	90.755	Colobus_angolensis_palliatus
ENSTRUG00000002920	prpf6	96	92.136	ENSCGRG00001022666	Prpf6	100	91.711	Cricetulus_griseus_chok1gshd
ENSTRUG00000002920	prpf6	96	91.720	ENSCSEG00000018561	prpf6	100	91.720	Cynoglossus_semilaevis
ENSTRUG00000002920	prpf6	100	95.872	ENSCVAG00000010550	prpf6	100	95.872	Cyprinodon_variegatus
ENSTRUG00000002920	prpf6	100	92.316	ENSDARG00000091367	prpf6	100	93.856	Danio_rerio
ENSTRUG00000002920	prpf6	96	91.817	ENSDNOG00000040544	PRPF6	100	91.498	Dasypus_novemcinctus
ENSTRUG00000002920	prpf6	87	91.589	ENSDORG00000005406	Prpf6	100	91.589	Dipodomys_ordii
ENSTRUG00000002920	prpf6	96	71.613	FBgn0036828	CG6841	99	71.720	Drosophila_melanogaster
ENSTRUG00000002920	prpf6	83	91.374	ENSETEG00000004447	PRPF6	85	91.374	Echinops_telfairi
ENSTRUG00000002920	prpf6	96	85.503	ENSEBUG00000008835	prpf6	100	85.079	Eptatretus_burgeri
ENSTRUG00000002920	prpf6	98	90.635	ENSEASG00005023115	PRPF6	100	91.605	Equus_asinus_asinus
ENSTRUG00000002920	prpf6	96	87.779	ENSECAG00000013983	PRPF6	100	87.354	Equus_caballus
ENSTRUG00000002920	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSTRUG00000002920	prpf6	97	94.380	ENSELUG00000001945	prpf6	94	94.380	Esox_lucius
ENSTRUG00000002920	prpf6	96	92.242	ENSFCAG00000001183	PRPF6	100	91.817	Felis_catus
ENSTRUG00000002920	prpf6	96	91.852	ENSFALG00000010326	-	98	91.534	Ficedula_albicollis
ENSTRUG00000002920	prpf6	97	84.528	ENSFALG00000006046	-	97	86.064	Ficedula_albicollis
ENSTRUG00000002920	prpf6	96	90.648	ENSFDAG00000006451	PRPF6	100	90.223	Fukomys_damarensis
ENSTRUG00000002920	prpf6	100	96.285	ENSFHEG00000000560	prpf6	100	96.285	Fundulus_heteroclitus
ENSTRUG00000002920	prpf6	97	93.531	ENSGMOG00000015622	prpf6	99	93.001	Gadus_morhua
ENSTRUG00000002920	prpf6	96	91.923	ENSGALG00000006001	PRPF6	100	91.605	Gallus_gallus
ENSTRUG00000002920	prpf6	100	91.744	ENSGAFG00000021109	prpf6	100	91.744	Gambusia_affinis
ENSTRUG00000002920	prpf6	97	95.021	ENSGACG00000002576	prpf6	100	95.021	Gasterosteus_aculeatus
ENSTRUG00000002920	prpf6	98	91.146	ENSGAGG00000008653	PRPF6	96	92.128	Gopherus_agassizii
ENSTRUG00000002920	prpf6	96	91.286	ENSGGOG00000016876	PRPF6	100	90.861	Gorilla_gorilla
ENSTRUG00000002920	prpf6	100	96.801	ENSHBUG00000004496	prpf6	100	96.801	Haplochromis_burtoni
ENSTRUG00000002920	prpf6	96	92.030	ENSHGLG00000009222	PRPF6	100	91.605	Heterocephalus_glaber_female
ENSTRUG00000002920	prpf6	93	91.930	ENSHGLG00100016600	PRPF6	100	91.494	Heterocephalus_glaber_male
ENSTRUG00000002920	prpf6	100	95.356	ENSHCOG00000011513	prpf6	100	95.356	Hippocampus_comes
ENSTRUG00000002920	prpf6	100	92.402	ENSIPUG00000004912	prpf6	100	92.402	Ictalurus_punctatus
ENSTRUG00000002920	prpf6	96	89.597	ENSSTOG00000002922	PRPF6	100	88.747	Ictidomys_tridecemlineatus
ENSTRUG00000002920	prpf6	96	92.136	ENSJJAG00000000836	Prpf6	100	91.711	Jaculus_jaculus
ENSTRUG00000002920	prpf6	100	96.594	ENSKMAG00000017800	prpf6	100	96.594	Kryptolebias_marmoratus
ENSTRUG00000002920	prpf6	100	95.562	ENSLBEG00000012582	prpf6	100	95.562	Labrus_bergylta
ENSTRUG00000002920	prpf6	98	91.476	ENSLOCG00000004827	prpf6	96	91.277	Lepisosteus_oculatus
ENSTRUG00000002920	prpf6	96	91.817	ENSLAFG00000005272	PRPF6	100	91.392	Loxodonta_africana
ENSTRUG00000002920	prpf6	96	91.180	ENSMFAG00000037542	PRPF6	100	90.755	Macaca_fascicularis
ENSTRUG00000002920	prpf6	96	85.138	ENSMMUG00000015558	PRPF6	95	93.761	Macaca_mulatta
ENSTRUG00000002920	prpf6	96	78.814	ENSMNEG00000045555	PRPF6	100	78.390	Macaca_nemestrina
ENSTRUG00000002920	prpf6	100	96.594	ENSMAMG00000010718	prpf6	100	96.594	Mastacembelus_armatus
ENSTRUG00000002920	prpf6	97	97.228	ENSMZEG00005015261	-	100	97.228	Maylandia_zebra
ENSTRUG00000002920	prpf6	90	97.143	ENSMZEG00005026539	prpf6	100	97.143	Maylandia_zebra
ENSTRUG00000002920	prpf6	93	92.039	ENSMGAG00000006634	PRPF6	100	91.712	Meleagris_gallopavo
ENSTRUG00000002920	prpf6	96	92.136	ENSMAUG00000013969	Prpf6	100	91.711	Mesocricetus_auratus
ENSTRUG00000002920	prpf6	84	90.998	ENSMICG00000017793	PRPF6	98	90.999	Microcebus_murinus
ENSTRUG00000002920	prpf6	96	92.242	ENSMOCG00000001701	Prpf6	100	91.817	Microtus_ochrogaster
ENSTRUG00000002920	prpf6	96	97.849	ENSMMOG00000020419	prpf6	100	97.849	Mola_mola
ENSTRUG00000002920	prpf6	93	92.972	ENSMODG00000017051	PRPF6	99	92.478	Monodelphis_domestica
ENSTRUG00000002920	prpf6	95	96.848	ENSMALG00000000089	prpf6	100	96.848	Monopterus_albus
ENSTRUG00000002920	prpf6	96	85.760	MGP_CAROLIEiJ_G0024814	Prpf6	100	84.910	Mus_caroli
ENSTRUG00000002920	prpf6	96	92.136	ENSMUSG00000002455	Prpf6	100	91.711	Mus_musculus
ENSTRUG00000002920	prpf6	96	92.136	MGP_PahariEiJ_G0026262	Prpf6	100	91.711	Mus_pahari
ENSTRUG00000002920	prpf6	96	92.136	MGP_SPRETEiJ_G0025741	Prpf6	100	91.711	Mus_spretus
ENSTRUG00000002920	prpf6	87	92.491	ENSMPUG00000008673	PRPF6	99	92.014	Mustela_putorius_furo
ENSTRUG00000002920	prpf6	96	92.242	ENSNGAG00000003365	Prpf6	100	91.817	Nannospalax_galili
ENSTRUG00000002920	prpf6	100	96.904	ENSNBRG00000015025	prpf6	100	96.904	Neolamprologus_brichardi
ENSTRUG00000002920	prpf6	96	91.180	ENSNLEG00000010208	PRPF6	100	90.755	Nomascus_leucogenys
ENSTRUG00000002920	prpf6	96	83.133	ENSMEUG00000009824	-	90	83.399	Notamacropus_eugenii
ENSTRUG00000002920	prpf6	96	86.185	ENSODEG00000004841	PRPF6	100	85.760	Octodon_degus
ENSTRUG00000002920	prpf6	100	96.801	ENSONIG00000017406	prpf6	100	96.801	Oreochromis_niloticus
ENSTRUG00000002920	prpf6	96	92.349	ENSOANG00000004920	PRPF6	100	91.923	Ornithorhynchus_anatinus
ENSTRUG00000002920	prpf6	95	90.129	ENSOCUG00000014151	PRPF6	100	89.700	Oryctolagus_cuniculus
ENSTRUG00000002920	prpf6	100	94.221	ENSORLG00000009592	prpf6	100	94.221	Oryzias_latipes
ENSTRUG00000002920	prpf6	100	94.324	ENSORLG00020001458	prpf6	100	94.324	Oryzias_latipes_hni
ENSTRUG00000002920	prpf6	100	94.324	ENSORLG00015018762	prpf6	100	94.324	Oryzias_latipes_hsok
ENSTRUG00000002920	prpf6	100	94.943	ENSOMEG00000012174	prpf6	100	94.943	Oryzias_melastigma
ENSTRUG00000002920	prpf6	96	84.926	ENSOGAG00000007573	PRPF6	100	84.501	Otolemur_garnettii
ENSTRUG00000002920	prpf6	98	90.605	ENSOARG00000008776	PRPF6	99	91.286	Ovis_aries
ENSTRUG00000002920	prpf6	96	91.286	ENSPPAG00000008686	PRPF6	100	90.861	Pan_paniscus
ENSTRUG00000002920	prpf6	96	92.242	ENSPPRG00000008497	PRPF6	100	91.817	Panthera_pardus
ENSTRUG00000002920	prpf6	93	92.148	ENSPTIG00000011184	PRPF6	97	91.712	Panthera_tigris_altaica
ENSTRUG00000002920	prpf6	96	91.286	ENSPTRG00000013765	PRPF6	100	90.861	Pan_troglodytes
ENSTRUG00000002920	prpf6	96	91.180	ENSPANG00000024135	PRPF6	100	90.755	Papio_anubis
ENSTRUG00000002920	prpf6	98	92.412	ENSPKIG00000005627	prpf6	99	93.617	Paramormyrops_kingsleyae
ENSTRUG00000002920	prpf6	88	92.148	ENSPSIG00000007717	PRPF6	98	92.148	Pelodiscus_sinensis
ENSTRUG00000002920	prpf6	100	94.330	ENSPMGG00000008925	prpf6	100	93.608	Periophthalmus_magnuspinnatus
ENSTRUG00000002920	prpf6	96	92.136	ENSPEMG00000016036	Prpf6	100	91.711	Peromyscus_maniculatus_bairdii
ENSTRUG00000002920	prpf6	97	87.355	ENSPMAG00000006144	prpf6	100	87.355	Petromyzon_marinus
ENSTRUG00000002920	prpf6	96	92.349	ENSPCIG00000017909	PRPF6	100	91.923	Phascolarctos_cinereus
ENSTRUG00000002920	prpf6	100	95.297	ENSPFOG00000006431	prpf6	99	95.297	Poecilia_formosa
ENSTRUG00000002920	prpf6	100	96.078	ENSPLAG00000005974	prpf6	100	96.078	Poecilia_latipinna
ENSTRUG00000002920	prpf6	100	96.285	ENSPMEG00000009977	prpf6	100	96.285	Poecilia_mexicana
ENSTRUG00000002920	prpf6	100	95.975	ENSPREG00000017993	prpf6	95	95.975	Poecilia_reticulata
ENSTRUG00000002920	prpf6	96	90.755	ENSPPYG00000011256	PRPF6	100	90.329	Pongo_abelii
ENSTRUG00000002920	prpf6	91	94.281	ENSPCAG00000006536	PRPF6	88	93.627	Procavia_capensis
ENSTRUG00000002920	prpf6	96	91.498	ENSPCOG00000016881	PRPF6	100	91.073	Propithecus_coquereli
ENSTRUG00000002920	prpf6	96	86.185	ENSPVAG00000014316	PRPF6	100	85.760	Pteropus_vampyrus
ENSTRUG00000002920	prpf6	100	83.265	ENSPNYG00000001939	prpf6	100	83.265	Pundamilia_nyererei
ENSTRUG00000002920	prpf6	97	94.386	ENSPNAG00000015606	prpf6	100	92.520	Pygocentrus_nattereri
ENSTRUG00000002920	prpf6	96	92.030	ENSRNOG00000051498	Prpf6	100	91.605	Rattus_norvegicus
ENSTRUG00000002920	prpf6	96	91.180	ENSRBIG00000043613	PRPF6	100	90.755	Rhinopithecus_bieti
ENSTRUG00000002920	prpf6	96	88.148	ENSRROG00000040969	PRPF6	100	87.725	Rhinopithecus_roxellana
ENSTRUG00000002920	prpf6	86	89.071	ENSSBOG00000020632	PRPF6	90	87.544	Saimiri_boliviensis_boliviensis
ENSTRUG00000002920	prpf6	96	92.349	ENSSHAG00000016810	PRPF6	100	91.923	Sarcophilus_harrisii
ENSTRUG00000002920	prpf6	95	94.731	ENSSFOG00015020859	prpf6	100	94.301	Scleropages_formosus
ENSTRUG00000002920	prpf6	100	95.666	ENSSMAG00000008112	prpf6	100	95.666	Scophthalmus_maximus
ENSTRUG00000002920	prpf6	100	97.110	ENSSDUG00000016142	prpf6	100	97.110	Seriola_dumerili
ENSTRUG00000002920	prpf6	100	97.110	ENSSLDG00000025283	prpf6	99	97.110	Seriola_lalandi_dorsalis
ENSTRUG00000002920	prpf6	88	90.867	ENSSPUG00000018260	PRPF6	98	90.867	Sphenodon_punctatus
ENSTRUG00000002920	prpf6	100	96.904	ENSSPAG00000015850	prpf6	100	96.904	Stegastes_partitus
ENSTRUG00000002920	prpf6	97	90.785	ENSSSCG00000029119	PRPF6	100	90.930	Sus_scrofa
ENSTRUG00000002920	prpf6	96	91.949	ENSTGUG00000007221	PRPF6	100	91.631	Taeniopygia_guttata
ENSTRUG00000002920	prpf6	96	92.561	ENSTNIG00000017873	prpf6	100	92.561	Tetraodon_nigroviridis
ENSTRUG00000002920	prpf6	85	93.333	ENSTBEG00000005348	PRPF6	85	91.111	Tupaia_belangeri
ENSTRUG00000002920	prpf6	96	92.136	ENSTTRG00000013068	PRPF6	100	91.711	Tursiops_truncatus
ENSTRUG00000002920	prpf6	98	87.409	ENSUMAG00000021631	PRPF6	98	89.891	Ursus_maritimus
ENSTRUG00000002920	prpf6	96	91.923	ENSVVUG00000014948	PRPF6	100	91.498	Vulpes_vulpes
ENSTRUG00000002920	prpf6	98	90.447	ENSXETG00000012054	prpf6	97	91.489	Xenopus_tropicalis
ENSTRUG00000002920	prpf6	100	96.388	ENSXCOG00000008082	prpf6	100	96.388	Xiphophorus_couchianus
ENSTRUG00000002920	prpf6	100	96.388	ENSXMAG00000015581	prpf6	100	96.388	Xiphophorus_maculatus