EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000002960 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5673 bases
Position: chrHE591774.1:16458-22130
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000006901	RRM_1	PF00076.22	6.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000006946	-	534	-	ENSTRUP00000006901	177 (aa)	-	H2S3C9

Gene Model

Click here to download ENSTRUG00000002960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000002960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000002960	srek1	94	76.836	ENSG00000153914	SREK1	73	90.909	Homo_sapiens
ENSTRUG00000002960	srek1	98	80.978	ENSACIG00000015041	srek1	98	80.978	Amphilophus_citrinellus
ENSTRUG00000002960	srek1	95	76.966	ENSANAG00000031358	SREK1	91	76.966	Aotus_nancymaae
ENSTRUG00000002960	srek1	98	82.778	ENSACLG00000026754	srek1	62	82.778	Astatotilapia_calliptera
ENSTRUG00000002960	srek1	95	76.966	ENSCJAG00000015950	SREK1	91	76.966	Callithrix_jacchus
ENSTRUG00000002960	srek1	75	90.152	ENSCAFG00020019448	-	67	90.152	Canis_lupus_dingo
ENSTRUG00000002960	srek1	94	77.966	ENSTSYG00000036957	SREK1	91	76.796	Carlito_syrichta
ENSTRUG00000002960	srek1	95	76.966	ENSCATG00000031482	SREK1	91	76.966	Cercocebus_atys
ENSTRUG00000002960	srek1	74	89.313	ENSCPBG00000026866	SREK1	53	75.141	Chrysemys_picta_bellii
ENSTRUG00000002960	srek1	95	76.966	ENSCANG00000030421	SREK1	91	76.966	Colobus_angolensis_palliatus
ENSTRUG00000002960	srek1	96	86.628	ENSCVAG00000002411	srek1	86	86.628	Cyprinodon_variegatus
ENSTRUG00000002960	srek1	95	76.966	ENSDORG00000023425	-	91	76.966	Dipodomys_ordii
ENSTRUG00000002960	srek1	95	75.691	ENSEASG00005006829	-	91	75.691	Equus_asinus_asinus
ENSTRUG00000002960	srek1	95	75.691	ENSECAG00000036994	-	91	75.691	Equus_caballus
ENSTRUG00000002960	srek1	50	88.636	ENSGALG00000043541	SREK1	53	70.149	Gallus_gallus
ENSTRUG00000002960	srek1	95	76.966	ENSGGOG00000004737	SREK1	91	76.966	Gorilla_gorilla
ENSTRUG00000002960	srek1	98	82.778	ENSHBUG00000007057	srek1	98	82.778	Haplochromis_burtoni
ENSTRUG00000002960	srek1	99	79.444	ENSHCOG00000017240	SREK1	55	79.444	Hippocampus_comes
ENSTRUG00000002960	srek1	95	77.528	ENSJJAG00000000214	-	91	77.528	Jaculus_jaculus
ENSTRUG00000002960	srek1	100	83.051	ENSLBEG00000022980	srek1	94	83.051	Labrus_bergylta
ENSTRUG00000002960	srek1	95	76.966	ENSMFAG00000039823	SREK1	91	76.966	Macaca_fascicularis
ENSTRUG00000002960	srek1	95	76.966	ENSMNEG00000030723	SREK1	91	76.966	Macaca_nemestrina
ENSTRUG00000002960	srek1	95	76.966	ENSMLEG00000039078	SREK1	91	76.966	Mandrillus_leucophaeus
ENSTRUG00000002960	srek1	98	82.778	ENSMZEG00005005719	srek1	98	82.778	Maylandia_zebra
ENSTRUG00000002960	srek1	72	77.344	ENSMGAG00000002047	SREK1	68	68.786	Meleagris_gallopavo
ENSTRUG00000002960	srek1	94	74.444	ENSMAUG00000010066	-	57	76.111	Mesocricetus_auratus
ENSTRUG00000002960	srek1	98	74.863	ENSMICG00000034959	SREK1	91	76.966	Microcebus_murinus
ENSTRUG00000002960	srek1	94	72.778	ENSMOCG00000001536	-	56	75.556	Microtus_ochrogaster
ENSTRUG00000002960	srek1	96	84.971	ENSMMOG00000008409	srek1	91	84.971	Mola_mola
ENSTRUG00000002960	srek1	95	74.586	ENSNGAG00000017527	-	91	74.586	Nannospalax_galili
ENSTRUG00000002960	srek1	98	81.868	ENSNBRG00000010718	srek1	98	81.868	Neolamprologus_brichardi
ENSTRUG00000002960	srek1	97	84.000	ENSONIG00000011080	srek1	50	82.682	Oreochromis_niloticus
ENSTRUG00000002960	srek1	97	81.522	ENSORLG00015020471	srek1	95	81.522	Oryzias_latipes_hsok
ENSTRUG00000002960	srek1	95	76.966	ENSPPAG00000031605	SREK1	91	76.966	Pan_paniscus
ENSTRUG00000002960	srek1	95	76.966	ENSPTRG00000016936	SREK1	91	76.966	Pan_troglodytes
ENSTRUG00000002960	srek1	95	76.966	ENSPANG00000008953	SREK1	91	76.966	Papio_anubis
ENSTRUG00000002960	srek1	98	83.815	ENSPMGG00000017031	srek1	100	83.815	Periophthalmus_magnuspinnatus
ENSTRUG00000002960	srek1	94	72.778	ENSPEMG00000024051	-	58	75.556	Peromyscus_maniculatus_bairdii
ENSTRUG00000002960	srek1	95	77.654	ENSPCIG00000017750	-	91	77.654	Phascolarctos_cinereus
ENSTRUG00000002960	srek1	96	85.057	ENSPLAG00000008827	srek1	99	85.057	Poecilia_latipinna
ENSTRUG00000002960	srek1	93	83.929	ENSPREG00000019912	srek1	98	83.929	Poecilia_reticulata
ENSTRUG00000002960	srek1	98	74.863	ENSPCOG00000026230	SREK1	91	76.966	Propithecus_coquereli
ENSTRUG00000002960	srek1	94	76.836	ENSRBIG00000033818	SREK1	92	73.404	Rhinopithecus_bieti
ENSTRUG00000002960	srek1	95	76.966	ENSRROG00000017210	SREK1	91	76.966	Rhinopithecus_roxellana
ENSTRUG00000002960	srek1	95	76.966	ENSSBOG00000031230	SREK1	91	76.966	Saimiri_boliviensis_boliviensis
ENSTRUG00000002960	srek1	95	74.719	ENSSPUG00000016553	SREK1	57	74.719	Sphenodon_punctatus
ENSTRUG00000002960	srek1	97	84.971	ENSSPAG00000022298	srek1	99	84.971	Stegastes_partitus
ENSTRUG00000002960	srek1	95	76.966	ENSUAMG00000022661	-	91	76.966	Ursus_americanus
ENSTRUG00000002960	srek1	75	90.152	ENSVVUG00000005890	-	67	90.152	Vulpes_vulpes
ENSTRUG00000002960	srek1	98	80.663	ENSXCOG00000017793	srek1	99	80.663	Xiphophorus_couchianus