EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000003041 (Gene tree)
Gene ID: 101065194
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3607 bases
Position: chr5:3922753-3926359
Accession: 101065194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007104	PseudoU_synth_2	PF00849.22	7.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000007149	-	2023	XM_011603766	ENSTRUP00000007104	311 (aa)	XP_011602068	H2S3Y2

Gene Model

Click here to download ENSTRUG00000003041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003041's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003041	rpusd1	98	55.844	ENSG00000007376	RPUSD1	99	66.467	Homo_sapiens
ENSTRUG00000003041	rpusd1	99	78.710	ENSAPOG00000022221	rpusd1	100	78.710	Acanthochromis_polyacanthus
ENSTRUG00000003041	rpusd1	98	57.190	ENSAMEG00000007461	RPUSD1	98	56.863	Ailuropoda_melanoleuca
ENSTRUG00000003041	rpusd1	99	80.645	ENSACIG00000015863	rpusd1	100	80.645	Amphilophus_citrinellus
ENSTRUG00000003041	rpusd1	99	80.000	ENSAOCG00000021975	rpusd1	97	80.000	Amphiprion_ocellaris
ENSTRUG00000003041	rpusd1	99	80.323	ENSAPEG00000001316	rpusd1	97	80.323	Amphiprion_percula
ENSTRUG00000003041	rpusd1	99	81.290	ENSATEG00000002984	rpusd1	100	81.290	Anabas_testudineus
ENSTRUG00000003041	rpusd1	77	58.091	ENSAPLG00000012316	RPUSD1	98	56.846	Anas_platyrhynchos
ENSTRUG00000003041	rpusd1	98	62.541	ENSACAG00000008953	RPUSD1	99	62.541	Anolis_carolinensis
ENSTRUG00000003041	rpusd1	98	55.556	ENSANAG00000024709	RPUSD1	98	55.987	Aotus_nancymaae
ENSTRUG00000003041	rpusd1	99	80.064	ENSACLG00000013692	rpusd1	100	80.064	Astatotilapia_calliptera
ENSTRUG00000003041	rpusd1	98	67.752	ENSAMXG00000019802	rpusd1	99	67.101	Astyanax_mexicanus
ENSTRUG00000003041	rpusd1	98	59.150	ENSBTAG00000000179	RPUSD1	98	59.477	Bos_taurus
ENSTRUG00000003041	rpusd1	98	55.987	ENSCJAG00000012253	RPUSD1	98	55.987	Callithrix_jacchus
ENSTRUG00000003041	rpusd1	98	57.190	ENSCAFG00000019614	RPUSD1	98	57.190	Canis_familiaris
ENSTRUG00000003041	rpusd1	98	57.190	ENSCAFG00020008891	RPUSD1	98	57.190	Canis_lupus_dingo
ENSTRUG00000003041	rpusd1	98	59.477	ENSCHIG00000012872	RPUSD1	98	59.804	Capra_hircus
ENSTRUG00000003041	rpusd1	98	55.882	ENSTSYG00000036934	RPUSD1	98	55.882	Carlito_syrichta
ENSTRUG00000003041	rpusd1	98	56.536	ENSCAPG00000014219	RPUSD1	98	56.536	Cavia_aperea
ENSTRUG00000003041	rpusd1	98	56.536	ENSCPOG00000034604	RPUSD1	98	56.536	Cavia_porcellus
ENSTRUG00000003041	rpusd1	98	55.556	ENSCCAG00000034385	RPUSD1	98	55.987	Cebus_capucinus
ENSTRUG00000003041	rpusd1	98	56.494	ENSCATG00000042983	RPUSD1	98	56.311	Cercocebus_atys
ENSTRUG00000003041	rpusd1	98	56.209	ENSCLAG00000013966	RPUSD1	98	56.209	Chinchilla_lanigera
ENSTRUG00000003041	rpusd1	98	56.494	ENSCSAG00000012121	RPUSD1	98	56.311	Chlorocebus_sabaeus
ENSTRUG00000003041	rpusd1	98	60.784	ENSCPBG00000021101	RPUSD1	99	60.458	Chrysemys_picta_bellii
ENSTRUG00000003041	rpusd1	83	62.452	ENSCANG00000028576	RPUSD1	78	75.490	Colobus_angolensis_palliatus
ENSTRUG00000003041	rpusd1	98	55.229	ENSCGRG00001014253	Rpusd1	98	55.229	Cricetulus_griseus_chok1gshd
ENSTRUG00000003041	rpusd1	98	55.229	ENSCGRG00000017995	Rpusd1	98	55.229	Cricetulus_griseus_crigri
ENSTRUG00000003041	rpusd1	97	79.934	ENSCSEG00000018512	rpusd1	98	79.934	Cynoglossus_semilaevis
ENSTRUG00000003041	rpusd1	99	77.023	ENSCVAG00000022746	rpusd1	100	74.434	Cyprinodon_variegatus
ENSTRUG00000003041	rpusd1	98	68.750	ENSDARG00000060192	rpusd1	99	68.421	Danio_rerio
ENSTRUG00000003041	rpusd1	98	54.248	ENSDNOG00000003721	RPUSD1	98	54.221	Dasypus_novemcinctus
ENSTRUG00000003041	rpusd1	98	55.882	ENSDORG00000026656	Rpusd1	98	57.190	Dipodomys_ordii
ENSTRUG00000003041	rpusd1	95	46.326	ENSEBUG00000008767	rpusd1	92	46.645	Eptatretus_burgeri
ENSTRUG00000003041	rpusd1	98	56.190	ENSEASG00005018421	RPUSD1	75	56.090	Equus_asinus_asinus
ENSTRUG00000003041	rpusd1	99	70.550	ENSELUG00000014307	rpusd1	90	71.521	Esox_lucius
ENSTRUG00000003041	rpusd1	98	56.209	ENSFCAG00000010359	RPUSD1	98	56.209	Felis_catus
ENSTRUG00000003041	rpusd1	98	63.816	ENSFALG00000003211	RPUSD1	99	62.171	Ficedula_albicollis
ENSTRUG00000003041	rpusd1	98	56.536	ENSFDAG00000013398	RPUSD1	98	56.536	Fukomys_damarensis
ENSTRUG00000003041	rpusd1	99	75.728	ENSFHEG00000004736	rpusd1	100	75.728	Fundulus_heteroclitus
ENSTRUG00000003041	rpusd1	99	70.455	ENSGMOG00000010756	rpusd1	99	71.753	Gadus_morhua
ENSTRUG00000003041	rpusd1	98	62.829	ENSGALG00000005315	RPUSD1	99	62.829	Gallus_gallus
ENSTRUG00000003041	rpusd1	99	76.375	ENSGAFG00000009886	rpusd1	100	74.757	Gambusia_affinis
ENSTRUG00000003041	rpusd1	99	80.259	ENSGACG00000014276	rpusd1	100	80.259	Gasterosteus_aculeatus
ENSTRUG00000003041	rpusd1	98	61.688	ENSGAGG00000004181	RPUSD1	99	61.688	Gopherus_agassizii
ENSTRUG00000003041	rpusd1	98	56.169	ENSGGOG00000013997	RPUSD1	98	55.987	Gorilla_gorilla
ENSTRUG00000003041	rpusd1	99	80.386	ENSHBUG00000023728	rpusd1	100	80.386	Haplochromis_burtoni
ENSTRUG00000003041	rpusd1	98	55.882	ENSHGLG00000002595	RPUSD1	98	55.882	Heterocephalus_glaber_female
ENSTRUG00000003041	rpusd1	98	55.882	ENSHGLG00100014303	RPUSD1	98	55.882	Heterocephalus_glaber_male
ENSTRUG00000003041	rpusd1	98	75.817	ENSHCOG00000002390	rpusd1	99	75.896	Hippocampus_comes
ENSTRUG00000003041	rpusd1	98	64.803	ENSIPUG00000001570	rpusd1	99	64.262	Ictalurus_punctatus
ENSTRUG00000003041	rpusd1	98	57.516	ENSSTOG00000004276	RPUSD1	98	57.516	Ictidomys_tridecemlineatus
ENSTRUG00000003041	rpusd1	98	55.882	ENSJJAG00000015696	Rpusd1	98	55.882	Jaculus_jaculus
ENSTRUG00000003041	rpusd1	99	75.806	ENSKMAG00000017287	rpusd1	100	74.194	Kryptolebias_marmoratus
ENSTRUG00000003041	rpusd1	99	80.000	ENSLBEG00000013354	RPUSD1	100	80.000	Labrus_bergylta
ENSTRUG00000003041	rpusd1	99	80.000	ENSLBEG00000022502	rpusd1	100	80.000	Labrus_bergylta
ENSTRUG00000003041	rpusd1	98	59.211	ENSLACG00000008869	RPUSD1	99	59.211	Latimeria_chalumnae
ENSTRUG00000003041	rpusd1	69	81.019	ENSLOCG00000005682	rpusd1	99	81.019	Lepisosteus_oculatus
ENSTRUG00000003041	rpusd1	98	55.229	ENSLAFG00000002115	RPUSD1	98	55.229	Loxodonta_africana
ENSTRUG00000003041	rpusd1	98	56.494	ENSMFAG00000003961	RPUSD1	98	56.311	Macaca_fascicularis
ENSTRUG00000003041	rpusd1	98	56.494	ENSMMUG00000000842	RPUSD1	98	56.311	Macaca_mulatta
ENSTRUG00000003041	rpusd1	98	56.494	ENSMNEG00000042712	RPUSD1	98	56.311	Macaca_nemestrina
ENSTRUG00000003041	rpusd1	98	56.494	ENSMLEG00000030591	RPUSD1	98	56.311	Mandrillus_leucophaeus
ENSTRUG00000003041	rpusd1	99	82.315	ENSMAMG00000004735	rpusd1	100	82.637	Mastacembelus_armatus
ENSTRUG00000003041	rpusd1	99	80.064	ENSMZEG00005003214	rpusd1	100	80.064	Maylandia_zebra
ENSTRUG00000003041	rpusd1	96	62.667	ENSMGAG00000005447	RPUSD1	99	62.667	Meleagris_gallopavo
ENSTRUG00000003041	rpusd1	81	55.336	ENSMAUG00000019998	Rpusd1	96	55.336	Mesocricetus_auratus
ENSTRUG00000003041	rpusd1	97	57.049	ENSMICG00000017561	RPUSD1	98	57.049	Microcebus_murinus
ENSTRUG00000003041	rpusd1	98	57.190	ENSMOCG00000014082	Rpusd1	98	56.863	Microtus_ochrogaster
ENSTRUG00000003041	rpusd1	98	79.479	ENSMMOG00000012569	rpusd1	99	78.502	Mola_mola
ENSTRUG00000003041	rpusd1	98	60.261	ENSMODG00000016882	RPUSD1	99	59.804	Monodelphis_domestica
ENSTRUG00000003041	rpusd1	99	81.029	ENSMALG00000017818	rpusd1	100	81.029	Monopterus_albus
ENSTRUG00000003041	rpusd1	98	57.516	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.516	Mus_caroli
ENSTRUG00000003041	rpusd1	98	57.190	ENSMUSG00000041199	Rpusd1	98	57.190	Mus_musculus
ENSTRUG00000003041	rpusd1	98	56.209	MGP_PahariEiJ_G0023562	Rpusd1	98	56.209	Mus_pahari
ENSTRUG00000003041	rpusd1	98	57.190	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.190	Mus_spretus
ENSTRUG00000003041	rpusd1	96	55.150	ENSMPUG00000015897	RPUSD1	96	55.150	Mustela_putorius_furo
ENSTRUG00000003041	rpusd1	98	56.863	ENSMLUG00000001089	RPUSD1	98	57.468	Myotis_lucifugus
ENSTRUG00000003041	rpusd1	98	56.209	ENSNGAG00000003595	Rpusd1	98	56.209	Nannospalax_galili
ENSTRUG00000003041	rpusd1	99	78.778	ENSNBRG00000006457	rpusd1	100	77.346	Neolamprologus_brichardi
ENSTRUG00000003041	rpusd1	54	45.882	ENSNLEG00000008424	-	97	45.882	Nomascus_leucogenys
ENSTRUG00000003041	rpusd1	98	60.197	ENSMEUG00000016049	RPUSD1	98	60.197	Notamacropus_eugenii
ENSTRUG00000003041	rpusd1	98	50.980	ENSOPRG00000008340	RPUSD1	98	50.980	Ochotona_princeps
ENSTRUG00000003041	rpusd1	98	56.209	ENSODEG00000016945	RPUSD1	98	56.209	Octodon_degus
ENSTRUG00000003041	rpusd1	98	80.844	ENSONIG00000015672	rpusd1	100	80.844	Oreochromis_niloticus
ENSTRUG00000003041	rpusd1	99	75.321	ENSORLG00000013009	rpusd1	100	75.321	Oryzias_latipes
ENSTRUG00000003041	rpusd1	99	74.760	ENSORLG00020010382	rpusd1	100	74.760	Oryzias_latipes_hni
ENSTRUG00000003041	rpusd1	99	74.359	ENSORLG00015021354	rpusd1	100	74.359	Oryzias_latipes_hsok
ENSTRUG00000003041	rpusd1	99	74.194	ENSOMEG00000021426	rpusd1	100	74.194	Oryzias_melastigma
ENSTRUG00000003041	rpusd1	98	56.311	ENSOGAG00000003795	RPUSD1	98	56.311	Otolemur_garnettii
ENSTRUG00000003041	rpusd1	98	59.477	ENSOARG00000014254	RPUSD1	98	59.804	Ovis_aries
ENSTRUG00000003041	rpusd1	98	55.844	ENSPPAG00000034797	RPUSD1	98	55.663	Pan_paniscus
ENSTRUG00000003041	rpusd1	98	56.536	ENSPPRG00000012389	RPUSD1	98	56.536	Panthera_pardus
ENSTRUG00000003041	rpusd1	98	56.169	ENSPTIG00000008545	RPUSD1	90	63.866	Panthera_tigris_altaica
ENSTRUG00000003041	rpusd1	98	55.844	ENSPTRG00000007565	RPUSD1	98	55.663	Pan_troglodytes
ENSTRUG00000003041	rpusd1	98	56.494	ENSPANG00000024401	RPUSD1	98	56.311	Papio_anubis
ENSTRUG00000003041	rpusd1	99	67.638	ENSPKIG00000018890	rpusd1	91	67.314	Paramormyrops_kingsleyae
ENSTRUG00000003041	rpusd1	98	62.215	ENSPSIG00000013945	RPUSD1	99	61.765	Pelodiscus_sinensis
ENSTRUG00000003041	rpusd1	99	73.786	ENSPMGG00000014950	rpusd1	99	73.139	Periophthalmus_magnuspinnatus
ENSTRUG00000003041	rpusd1	98	56.863	ENSPEMG00000000497	Rpusd1	98	56.536	Peromyscus_maniculatus_bairdii
ENSTRUG00000003041	rpusd1	98	54.369	ENSPMAG00000001563	rpusd1	99	54.870	Petromyzon_marinus
ENSTRUG00000003041	rpusd1	98	60.984	ENSPCIG00000021216	-	92	60.855	Phascolarctos_cinereus
ENSTRUG00000003041	rpusd1	99	77.023	ENSPFOG00000007946	rpusd1	100	74.757	Poecilia_formosa
ENSTRUG00000003041	rpusd1	99	77.023	ENSPLAG00000011925	rpusd1	100	74.757	Poecilia_latipinna
ENSTRUG00000003041	rpusd1	99	77.023	ENSPMEG00000002910	rpusd1	100	74.757	Poecilia_mexicana
ENSTRUG00000003041	rpusd1	99	77.023	ENSPREG00000019851	rpusd1	100	74.757	Poecilia_reticulata
ENSTRUG00000003041	rpusd1	98	43.791	ENSPCAG00000002258	RPUSD1	98	43.137	Procavia_capensis
ENSTRUG00000003041	rpusd1	98	55.340	ENSPCOG00000022582	RPUSD1	78	75.490	Propithecus_coquereli
ENSTRUG00000003041	rpusd1	98	52.751	ENSPVAG00000013104	RPUSD1	98	52.288	Pteropus_vampyrus
ENSTRUG00000003041	rpusd1	99	80.386	ENSPNYG00000024076	rpusd1	100	80.386	Pundamilia_nyererei
ENSTRUG00000003041	rpusd1	98	65.584	ENSPNAG00000013806	rpusd1	99	64.052	Pygocentrus_nattereri
ENSTRUG00000003041	rpusd1	98	57.190	ENSRNOG00000023639	Rpusd1	98	57.190	Rattus_norvegicus
ENSTRUG00000003041	rpusd1	98	57.143	ENSRBIG00000030238	RPUSD1	98	56.634	Rhinopithecus_bieti
ENSTRUG00000003041	rpusd1	98	57.143	ENSRROG00000036663	RPUSD1	98	56.634	Rhinopithecus_roxellana
ENSTRUG00000003041	rpusd1	98	56.863	ENSSBOG00000033063	RPUSD1	98	56.863	Saimiri_boliviensis_boliviensis
ENSTRUG00000003041	rpusd1	98	59.609	ENSSHAG00000013500	RPUSD1	98	59.283	Sarcophilus_harrisii
ENSTRUG00000003041	rpusd1	98	68.710	ENSSFOG00015014394	rpusd1	99	68.078	Scleropages_formosus
ENSTRUG00000003041	rpusd1	99	81.230	ENSSMAG00000008045	rpusd1	93	81.230	Scophthalmus_maximus
ENSTRUG00000003041	rpusd1	99	82.581	ENSSDUG00000001829	rpusd1	97	82.581	Seriola_dumerili
ENSTRUG00000003041	rpusd1	99	82.581	ENSSLDG00000020853	rpusd1	97	82.581	Seriola_lalandi_dorsalis
ENSTRUG00000003041	rpusd1	53	70.060	ENSSARG00000011187	-	100	70.060	Sorex_araneus
ENSTRUG00000003041	rpusd1	62	54.922	ENSSPUG00000005119	-	98	54.922	Sphenodon_punctatus
ENSTRUG00000003041	rpusd1	99	82.903	ENSSPAG00000012708	rpusd1	100	82.903	Stegastes_partitus
ENSTRUG00000003041	rpusd1	98	56.958	ENSSSCG00000008000	RPUSD1	98	64.567	Sus_scrofa
ENSTRUG00000003041	rpusd1	78	72.314	ENSTGUG00000015375	RPUSD1	99	69.721	Taeniopygia_guttata
ENSTRUG00000003041	rpusd1	98	75.817	ENSTNIG00000002660	rpusd1	99	75.817	Tetraodon_nigroviridis
ENSTRUG00000003041	rpusd1	98	57.929	ENSTTRG00000010167	RPUSD1	98	57.929	Tursiops_truncatus
ENSTRUG00000003041	rpusd1	98	56.536	ENSUAMG00000012736	RPUSD1	98	56.536	Ursus_americanus
ENSTRUG00000003041	rpusd1	98	56.536	ENSUMAG00000021174	RPUSD1	94	61.923	Ursus_maritimus
ENSTRUG00000003041	rpusd1	98	56.863	ENSVVUG00000012357	RPUSD1	98	56.863	Vulpes_vulpes
ENSTRUG00000003041	rpusd1	98	61.967	ENSXETG00000007184	rpusd1	98	60.855	Xenopus_tropicalis
ENSTRUG00000003041	rpusd1	99	75.405	ENSXCOG00000017930	rpusd1	100	74.516	Xiphophorus_couchianus
ENSTRUG00000003041	rpusd1	99	76.375	ENSXMAG00000024084	rpusd1	100	74.434	Xiphophorus_maculatus