EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003111 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5609 bases
Position: chrHE594943.1:1-5609
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007284	zf-C2H2	PF00096.26	1.5e-36	1	6
ENSTRUP00000007284	zf-C2H2	PF00096.26	1.5e-36	2	6
ENSTRUP00000007284	zf-C2H2	PF00096.26	1.5e-36	3	6
ENSTRUP00000007284	zf-C2H2	PF00096.26	1.5e-36	4	6
ENSTRUP00000007284	zf-C2H2	PF00096.26	1.5e-36	5	6
ENSTRUP00000007284	zf-C2H2	PF00096.26	1.5e-36	6	6
ENSTRUP00000007284	zf-met	PF12874.7	1.8e-09	1	2
ENSTRUP00000007284	zf-met	PF12874.7	1.8e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000007329	-	648	-	ENSTRUP00000007284	215 (aa)	-	H2S4G2

Gene Model

Click here to download ENSTRUG00000003111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003111	-	77	40.146	ENSTRUG00000025588	snai2	52	40.146
ENSTRUG00000003111	-	87	64.912	ENSTRUG00000000995	-	70	64.912
ENSTRUG00000003111	-	95	62.874	ENSTRUG00000007022	-	73	62.712
ENSTRUG00000003111	-	76	36.486	ENSTRUG00000000419	sna2	55	37.241
ENSTRUG00000003111	-	86	43.275	ENSTRUG00000012157	-	66	43.275
ENSTRUG00000003111	-	84	42.541	ENSTRUG00000023491	-	61	42.541
ENSTRUG00000003111	-	85	64.865	ENSTRUG00000022919	-	82	64.865
ENSTRUG00000003111	-	87	45.122	ENSTRUG00000022076	-	80	49.432
ENSTRUG00000003111	-	83	46.471	ENSTRUG00000024073	-	62	46.471
ENSTRUG00000003111	-	98	54.483	ENSTRUG00000006896	-	88	54.667
ENSTRUG00000003111	-	86	65.217	ENSTRUG00000013906	-	94	65.217
ENSTRUG00000003111	-	76	43.689	ENSTRUG00000022990	sna1	50	44.037
ENSTRUG00000003111	-	85	34.694	ENSTRUG00000024008	-	53	34.694
ENSTRUG00000003111	-	89	46.154	ENSTRUG00000022843	-	61	46.154
ENSTRUG00000003111	-	87	40.994	ENSTRUG00000003454	-	68	40.994
ENSTRUG00000003111	-	82	56.552	ENSTRUG00000012273	-	76	56.552
ENSTRUG00000003111	-	90	40.659	ENSTRUG00000025597	znf646	72	40.659
ENSTRUG00000003111	-	85	44.706	ENSTRUG00000013850	prdm5	75	47.059
ENSTRUG00000003111	-	94	42.105	ENSTRUG00000020495	si:dkey-89b17.4	59	35.075
ENSTRUG00000003111	-	97	64.979	ENSTRUG00000001268	-	89	75.439
ENSTRUG00000003111	-	94	46.552	ENSTRUG00000017456	znf236	57	46.552
ENSTRUG00000003111	-	85	31.351	ENSTRUG00000019941	-	54	31.351
ENSTRUG00000003111	-	80	49.708	ENSTRUG00000019940	-	51	49.708
ENSTRUG00000003111	-	82	59.884	ENSTRUG00000020208	-	64	52.047
ENSTRUG00000003111	-	83	43.478	ENSTRUG00000021675	-	80	44.444
ENSTRUG00000003111	-	80	44.118	ENSTRUG00000004525	gfi1b	50	44.118
ENSTRUG00000003111	-	95	69.663	ENSTRUG00000022206	-	56	69.663
ENSTRUG00000003111	-	83	36.000	ENSTRUG00000005241	gtf3ab	87	36.000
ENSTRUG00000003111	-	84	62.712	ENSTRUG00000022515	-	52	62.712
ENSTRUG00000003111	-	98	47.154	ENSTRUG00000005321	-	95	47.154
ENSTRUG00000003111	-	96	69.822	ENSTRUG00000021765	-	59	69.822
ENSTRUG00000003111	-	88	33.758	ENSTRUG00000006180	si:ch211-216l23.1	62	33.758
ENSTRUG00000003111	-	85	54.472	ENSTRUG00000020582	-	86	54.472
ENSTRUG00000003111	-	87	43.860	ENSTRUG00000019685	znf319b	85	43.860
ENSTRUG00000003111	-	90	57.895	ENSTRUG00000022969	-	98	57.895
ENSTRUG00000003111	-	98	62.791	ENSTRUG00000005180	-	82	62.791
ENSTRUG00000003111	-	86	39.252	ENSTRUG00000025881	-	63	40.244
ENSTRUG00000003111	-	93	45.283	ENSTRUG00000022066	-	88	44.000
ENSTRUG00000003111	-	86	66.364	ENSTRUG00000025189	-	61	65.766
ENSTRUG00000003111	-	83	40.984	ENSTRUG00000011385	znf341	50	40.984
ENSTRUG00000003111	-	80	46.154	ENSTRUG00000022666	-	52	46.154
ENSTRUG00000003111	-	95	52.299	ENSTRUG00000019483	-	100	52.778
ENSTRUG00000003111	-	89	38.650	ENSTRUG00000014476	-	84	38.650
ENSTRUG00000003111	-	82	47.967	ENSTRUG00000003277	zbtb17	93	47.967
ENSTRUG00000003111	-	94	33.758	ENSTRUG00000001452	PRDM15	56	33.758
ENSTRUG00000003111	-	93	45.333	ENSTRUG00000015687	-	89	50.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003111	-	79	54.369	ENSAPOG00000005767	-	100	54.369	Acanthochromis_polyacanthus
ENSTRUG00000003111	-	84	59.028	ENSAOCG00000000570	-	66	59.028	Amphiprion_ocellaris
ENSTRUG00000003111	-	80	50.427	ENSAPEG00000018796	-	74	50.427	Amphiprion_percula
ENSTRUG00000003111	-	87	43.511	ENSCVAG00000018507	-	72	43.511	Cyprinodon_variegatus
ENSTRUG00000003111	-	91	42.143	ENSFHEG00000022534	-	77	42.143	Fundulus_heteroclitus
ENSTRUG00000003111	-	80	52.817	ENSKMAG00000013745	-	59	52.817	Kryptolebias_marmoratus
ENSTRUG00000003111	-	83	56.693	ENSMAMG00000018114	-	78	56.693	Mastacembelus_armatus
ENSTRUG00000003111	-	85	44.186	ENSMAMG00000009817	-	88	46.479	Mastacembelus_armatus
ENSTRUG00000003111	-	86	58.228	ENSMZEG00005016808	-	86	58.228	Maylandia_zebra
ENSTRUG00000003111	-	97	58.480	ENSMALG00000001085	-	94	58.480	Monopterus_albus
ENSTRUG00000003111	-	80	60.993	ENSMALG00000012116	-	99	60.993	Monopterus_albus
ENSTRUG00000003111	-	80	59.783	ENSMALG00000012757	-	70	59.783	Monopterus_albus
ENSTRUG00000003111	-	96	64.384	ENSMALG00000004579	-	97	58.382	Monopterus_albus
ENSTRUG00000003111	-	82	51.908	ENSMALG00000008930	-	79	49.143	Monopterus_albus
ENSTRUG00000003111	-	84	50.898	ENSNBRG00000013501	-	84	50.898	Neolamprologus_brichardi
ENSTRUG00000003111	-	86	47.552	ENSOMEG00000021420	-	64	47.552	Oryzias_melastigma
ENSTRUG00000003111	-	85	37.821	ENSPREG00000014898	-	61	37.821	Poecilia_reticulata
ENSTRUG00000003111	-	84	47.771	ENSPNYG00000007756	-	73	48.175	Pundamilia_nyererei
ENSTRUG00000003111	-	84	54.762	ENSSDUG00000001263	-	80	54.762	Seriola_dumerili
ENSTRUG00000003111	-	93	53.125	ENSSLDG00000023661	-	84	53.125	Seriola_lalandi_dorsalis
ENSTRUG00000003111	-	82	56.552	ENSTNIG00000005856	-	98	56.552	Tetraodon_nigroviridis
ENSTRUG00000003111	-	85	52.740	ENSXCOG00000019492	-	94	52.740	Xiphophorus_couchianus
ENSTRUG00000003111	-	82	55.172	ENSXMAG00000022297	-	99	55.172	Xiphophorus_maculatus