EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003148 (Gene tree)
Gene ID: 101073586
Gene Symbol: -
Alias: -
Full Name: family with sequence similarity 98 member A
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4406 bases
Position: chr4:1214694-1219099
Accession: 101073586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007367	DUF2465	PF10239.9	2.5e-129	1	1
ENSTRUP00000007368	DUF2465	PF10239.9	1.8e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000007413	-	918	-	ENSTRUP00000007368	305 (aa)	-	H2S4P6
ENSTRUT00000007412	-	1455	XM_003963612	ENSTRUP00000007367	484 (aa)	XP_003963661	H2S4P5

Gene Model

Click here to download ENSTRUG00000003148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003148	-	58	31.922	ENSTRUG00000015519	im:7138535	78	31.488
ENSTRUG00000003148	-	97	42.230	ENSTRUG00000013778	fam98b	89	44.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003148	-	97	82.432	ENSAPOG00000008610	-	100	71.654	Acanthochromis_polyacanthus
ENSTRUG00000003148	-	96	83.959	ENSACIG00000010408	-	64	85.759	Amphilophus_citrinellus
ENSTRUG00000003148	-	97	82.770	ENSAPEG00000008140	-	100	70.334	Amphiprion_percula
ENSTRUG00000003148	-	97	83.446	ENSATEG00000005828	-	100	70.565	Anabas_testudineus
ENSTRUG00000003148	-	97	83.108	ENSACLG00000013245	-	66	85.759	Astatotilapia_calliptera
ENSTRUG00000003148	-	96	73.220	ENSCSAG00000011860	-	68	75.617	Chlorocebus_sabaeus
ENSTRUG00000003148	-	95	81.443	ENSCSEG00000016455	-	57	80.068	Cynoglossus_semilaevis
ENSTRUG00000003148	-	73	80.717	ENSFHEG00000010992	-	58	84.800	Fundulus_heteroclitus
ENSTRUG00000003148	-	97	83.108	ENSMZEG00005018771	-	66	85.759	Maylandia_zebra
ENSTRUG00000003148	-	92	48.571	ENSMGAG00000012247	-	70	48.057	Meleagris_gallopavo
ENSTRUG00000003148	-	97	72.054	ENSNGAG00000000323	-	63	75.000	Nannospalax_galili
ENSTRUG00000003148	-	97	83.108	ENSNBRG00000021034	-	65	85.759	Neolamprologus_brichardi
ENSTRUG00000003148	-	79	58.921	ENSODEG00000008619	-	65	55.625	Octodon_degus
ENSTRUG00000003148	-	97	79.054	ENSORLG00000028435	-	66	82.353	Oryzias_latipes
ENSTRUG00000003148	-	97	83.108	ENSPNYG00000002709	-	65	85.759	Pundamilia_nyererei
ENSTRUG00000003148	-	97	72.054	ENSSHAG00000014263	-	63	75.000	Sarcophilus_harrisii
ENSTRUG00000003148	-	95	81.787	ENSSMAG00000017550	-	57	80.405	Scophthalmus_maximus
ENSTRUG00000003148	-	97	85.135	ENSSDUG00000022080	-	62	87.616	Seriola_dumerili
ENSTRUG00000003148	-	97	83.721	ENSSLDG00000011581	-	64	86.280	Seriola_lalandi_dorsalis
ENSTRUG00000003148	-	97	82.432	ENSSPAG00000014058	-	100	71.881	Stegastes_partitus