EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003247 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC101062517
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2983 bases
Position: chrHE592670.1:9200-12182
Accession: 101062517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007613	Sua5_yciO_yrdC	PF01300.18	4.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000007660	-	2418	XM_011620599	ENSTRUP00000007613	806 (aa)	XP_011618901	H2S5E1

Gene Model

Click here to download ENSTRUG00000003247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003247	si:ch211-153b23.4	64	33.270	ENSTRUG00000020530	si:ch211-153b23.3	57	33.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003247	si:ch211-153b23.4	95	82.490	ENSAPOG00000006178	si:ch211-153b23.4	89	82.490	Acanthochromis_polyacanthus
ENSTRUG00000003247	si:ch211-153b23.4	97	81.737	ENSAPOG00000006144	si:ch211-153b23.4	90	82.660	Acanthochromis_polyacanthus
ENSTRUG00000003247	si:ch211-153b23.4	98	82.412	ENSACIG00000006997	si:ch211-153b23.4	93	82.412	Amphilophus_citrinellus
ENSTRUG00000003247	si:ch211-153b23.4	97	77.354	ENSAOCG00000010999	si:ch211-153b23.4	95	77.354	Amphiprion_ocellaris
ENSTRUG00000003247	si:ch211-153b23.4	99	78.829	ENSAPEG00000014665	si:ch211-153b23.4	94	78.829	Amphiprion_percula
ENSTRUG00000003247	si:ch211-153b23.4	99	81.436	ENSATEG00000004948	si:ch211-153b23.4	92	81.436	Anabas_testudineus
ENSTRUG00000003247	si:ch211-153b23.4	99	59.305	ENSAPLG00000013596	-	97	59.305	Anas_platyrhynchos
ENSTRUG00000003247	si:ch211-153b23.4	100	78.863	ENSACLG00000005471	si:ch211-153b23.4	92	78.863	Astatotilapia_calliptera
ENSTRUG00000003247	si:ch211-153b23.4	100	71.375	ENSAMXG00000013879	si:ch211-153b23.4	95	71.375	Astyanax_mexicanus
ENSTRUG00000003247	si:ch211-153b23.4	80	30.000	ENSAMXG00000038564	si:ch211-153b23.3	74	30.000	Astyanax_mexicanus
ENSTRUG00000003247	si:ch211-153b23.4	100	77.009	ENSCSEG00000014838	si:ch211-153b23.4	96	77.009	Cynoglossus_semilaevis
ENSTRUG00000003247	si:ch211-153b23.4	63	32.375	ENSCSEG00000014853	si:ch211-153b23.3	57	32.375	Cynoglossus_semilaevis
ENSTRUG00000003247	si:ch211-153b23.4	100	79.404	ENSCVAG00000021145	si:ch211-153b23.4	99	79.404	Cyprinodon_variegatus
ENSTRUG00000003247	si:ch211-153b23.4	100	69.420	ENSDARG00000077169	si:ch211-153b23.4	92	69.420	Danio_rerio
ENSTRUG00000003247	si:ch211-153b23.4	99	69.051	ENSELUG00000004961	si:ch211-153b23.4	91	69.051	Esox_lucius
ENSTRUG00000003247	si:ch211-153b23.4	99	57.534	ENSFALG00000011343	-	92	57.534	Ficedula_albicollis
ENSTRUG00000003247	si:ch211-153b23.4	84	86.802	ENSFHEG00000009888	si:ch211-153b23.4	76	86.802	Fundulus_heteroclitus
ENSTRUG00000003247	si:ch211-153b23.4	99	79.099	ENSFHEG00000010001	si:ch211-153b23.4	100	79.099	Fundulus_heteroclitus
ENSTRUG00000003247	si:ch211-153b23.4	93	78.533	ENSGAFG00000007442	si:ch211-153b23.4	90	78.675	Gambusia_affinis
ENSTRUG00000003247	si:ch211-153b23.4	100	79.604	ENSGACG00000018253	si:ch211-153b23.4	95	79.604	Gasterosteus_aculeatus
ENSTRUG00000003247	si:ch211-153b23.4	86	62.767	ENSGAGG00000024601	-	93	62.767	Gopherus_agassizii
ENSTRUG00000003247	si:ch211-153b23.4	83	78.190	ENSHBUG00000000013	si:ch211-153b23.4	89	78.190	Haplochromis_burtoni
ENSTRUG00000003247	si:ch211-153b23.4	99	69.592	ENSIPUG00000015205	si:ch211-153b23.4	96	69.592	Ictalurus_punctatus
ENSTRUG00000003247	si:ch211-153b23.4	100	80.346	ENSKMAG00000006919	-	92	80.346	Kryptolebias_marmoratus
ENSTRUG00000003247	si:ch211-153b23.4	98	80.706	ENSKMAG00000006829	si:ch211-153b23.4	98	80.706	Kryptolebias_marmoratus
ENSTRUG00000003247	si:ch211-153b23.4	78	30.215	ENSKMAG00000006792	si:ch211-153b23.3	72	30.061	Kryptolebias_marmoratus
ENSTRUG00000003247	si:ch211-153b23.4	100	82.447	ENSLBEG00000026309	si:ch211-153b23.4	92	82.447	Labrus_bergylta
ENSTRUG00000003247	si:ch211-153b23.4	99	63.445	ENSLACG00000017592	si:ch211-153b23.4	96	63.445	Latimeria_chalumnae
ENSTRUG00000003247	si:ch211-153b23.4	62	31.579	ENSMAMG00000009328	si:ch211-153b23.3	57	31.579	Mastacembelus_armatus
ENSTRUG00000003247	si:ch211-153b23.4	100	83.623	ENSMAMG00000009358	si:ch211-153b23.4	99	83.623	Mastacembelus_armatus
ENSTRUG00000003247	si:ch211-153b23.4	99	83.396	ENSMAMG00000009277	si:ch211-153b23.4	96	83.521	Mastacembelus_armatus
ENSTRUG00000003247	si:ch211-153b23.4	100	79.032	ENSMZEG00005011433	si:ch211-153b23.4	98	79.032	Maylandia_zebra
ENSTRUG00000003247	si:ch211-153b23.4	99	59.553	ENSMGAG00000005478	-	97	59.553	Meleagris_gallopavo
ENSTRUG00000003247	si:ch211-153b23.4	100	83.127	ENSMMOG00000004425	si:ch211-153b23.4	99	83.127	Mola_mola
ENSTRUG00000003247	si:ch211-153b23.4	99	78.868	ENSNBRG00000013392	si:ch211-153b23.4	100	78.868	Neolamprologus_brichardi
ENSTRUG00000003247	si:ch211-153b23.4	100	78.863	ENSONIG00000017875	si:ch211-153b23.4	92	78.863	Oreochromis_niloticus
ENSTRUG00000003247	si:ch211-153b23.4	99	78.218	ENSORLG00000006169	si:ch211-153b23.4	92	78.218	Oryzias_latipes
ENSTRUG00000003247	si:ch211-153b23.4	99	78.589	ENSORLG00020009905	si:ch211-153b23.4	92	78.713	Oryzias_latipes_hni
ENSTRUG00000003247	si:ch211-153b23.4	99	78.465	ENSORLG00015003709	si:ch211-153b23.4	92	78.465	Oryzias_latipes_hsok
ENSTRUG00000003247	si:ch211-153b23.4	99	78.713	ENSOMEG00000007682	si:ch211-153b23.4	92	78.713	Oryzias_melastigma
ENSTRUG00000003247	si:ch211-153b23.4	99	67.367	ENSPKIG00000014429	si:ch211-153b23.4	95	67.205	Paramormyrops_kingsleyae
ENSTRUG00000003247	si:ch211-153b23.4	100	68.395	ENSPKIG00000025681	si:ch211-153b23.4	94	68.395	Paramormyrops_kingsleyae
ENSTRUG00000003247	si:ch211-153b23.4	98	64.051	ENSPMGG00000001313	si:ch211-153b23.4	85	64.332	Periophthalmus_magnuspinnatus
ENSTRUG00000003247	si:ch211-153b23.4	84	79.823	ENSPFOG00000012164	si:ch211-153b23.4	95	79.823	Poecilia_formosa
ENSTRUG00000003247	si:ch211-153b23.4	99	78.207	ENSPLAG00000016295	si:ch211-153b23.4	99	78.207	Poecilia_latipinna
ENSTRUG00000003247	si:ch211-153b23.4	97	77.209	ENSPMEG00000007538	si:ch211-153b23.4	95	77.209	Poecilia_mexicana
ENSTRUG00000003247	si:ch211-153b23.4	100	78.784	ENSPNYG00000000250	si:ch211-153b23.4	98	78.784	Pundamilia_nyererei
ENSTRUG00000003247	si:ch211-153b23.4	99	72.559	ENSPNAG00000019554	si:ch211-153b23.4	91	72.559	Pygocentrus_nattereri
ENSTRUG00000003247	si:ch211-153b23.4	100	72.188	ENSSFOG00015010891	si:ch211-153b23.4	93	72.188	Scleropages_formosus
ENSTRUG00000003247	si:ch211-153b23.4	99	68.171	ENSSFOG00015003920	-	93	68.171	Scleropages_formosus
ENSTRUG00000003247	si:ch211-153b23.4	51	37.709	ENSSFOG00015009030	-	65	37.709	Scleropages_formosus
ENSTRUG00000003247	si:ch211-153b23.4	100	82.695	ENSSMAG00000010067	si:ch211-153b23.4	93	82.695	Scophthalmus_maximus
ENSTRUG00000003247	si:ch211-153b23.4	99	59.108	ENSSDUG00000006842	si:ch211-153b23.4	94	59.232	Seriola_dumerili
ENSTRUG00000003247	si:ch211-153b23.4	100	82.506	ENSSDUG00000006671	si:ch211-153b23.4	99	82.506	Seriola_dumerili
ENSTRUG00000003247	si:ch211-153b23.4	83	81.073	ENSSDUG00000006931	si:ch211-153b23.4	92	81.222	Seriola_dumerili
ENSTRUG00000003247	si:ch211-153b23.4	54	33.987	ENSSLDG00000008629	si:ch211-153b23.3	51	33.987	Seriola_lalandi_dorsalis
ENSTRUG00000003247	si:ch211-153b23.4	99	59.553	ENSTGUG00000005499	-	98	59.553	Taeniopygia_guttata
ENSTRUG00000003247	si:ch211-153b23.4	100	86.296	ENSTNIG00000008958	si:ch211-153b23.4	97	86.420	Tetraodon_nigroviridis
ENSTRUG00000003247	si:ch211-153b23.4	100	55.556	ENSXETG00000004489	-	91	55.556	Xenopus_tropicalis
ENSTRUG00000003247	si:ch211-153b23.4	99	78.829	ENSXMAG00000021388	si:ch211-153b23.4	97	78.960	Xiphophorus_maculatus
ENSTRUG00000003247	si:ch211-153b23.4	99	78.856	ENSXMAG00000009416	-	94	78.856	Xiphophorus_maculatus