EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003352 (Gene tree)
Gene ID: 101075859
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4413 bases
Position: chrHE592393.1:5650-10062
Accession: 101075859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007841	RRM_1	PF00076.22	7.1e-27	1	2
ENSTRUP00000007841	RRM_1	PF00076.22	7.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000007888	-	2272	XM_003977246	ENSTRUP00000007841	304 (aa)	XP_003977295	H2S619

Gene Model

Click here to download ENSTRUG00000003352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003352's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003352	trnau1apa	60	31.217	ENSTRUG00000015136	-	61	31.217
ENSTRUG00000003352	trnau1apa	92	40.179	ENSTRUG00000008608	trnau1apb	94	41.369
ENSTRUG00000003352	trnau1apa	64	31.447	ENSTRUG00000003767	-	60	31.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003352	trnau1apa	98	58.472	ENSG00000180098	TRNAU1AP	98	59.136	Homo_sapiens
ENSTRUG00000003352	trnau1apa	100	82.581	ENSAPOG00000007148	TRNAU1AP	100	83.226	Acanthochromis_polyacanthus
ENSTRUG00000003352	trnau1apa	98	58.804	ENSAMEG00000011367	TRNAU1AP	98	59.468	Ailuropoda_melanoleuca
ENSTRUG00000003352	trnau1apa	91	95.506	ENSACIG00000004161	trnau1apa	93	95.506	Amphilophus_citrinellus
ENSTRUG00000003352	trnau1apa	100	82.736	ENSAOCG00000008056	trnau1apa	100	83.388	Amphiprion_ocellaris
ENSTRUG00000003352	trnau1apa	100	82.736	ENSAPEG00000008868	trnau1apa	100	83.388	Amphiprion_percula
ENSTRUG00000003352	trnau1apa	100	81.270	ENSATEG00000012140	trnau1apa	100	81.587	Anabas_testudineus
ENSTRUG00000003352	trnau1apa	92	57.544	ENSAPLG00000002606	TRNAU1AP	98	58.865	Anas_platyrhynchos
ENSTRUG00000003352	trnau1apa	75	35.622	ENSACAG00000004205	-	86	35.223	Anolis_carolinensis
ENSTRUG00000003352	trnau1apa	92	46.503	ENSACAG00000003995	-	94	49.653	Anolis_carolinensis
ENSTRUG00000003352	trnau1apa	98	58.472	ENSANAG00000018976	TRNAU1AP	98	59.136	Aotus_nancymaae
ENSTRUG00000003352	trnau1apa	100	81.433	ENSACLG00000018515	trnau1apa	100	83.388	Astatotilapia_calliptera
ENSTRUG00000003352	trnau1apa	99	53.226	ENSAMXG00000013750	trnau1apa	97	53.226	Astyanax_mexicanus
ENSTRUG00000003352	trnau1apa	93	72.727	ENSAMXG00000029240	-	97	72.727	Astyanax_mexicanus
ENSTRUG00000003352	trnau1apa	98	58.140	ENSBTAG00000010393	TRNAU1AP	98	58.804	Bos_taurus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSCJAG00000009717	TRNAU1AP	98	59.136	Callithrix_jacchus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSCAFG00000011735	TRNAU1AP	98	59.136	Canis_familiaris
ENSTRUG00000003352	trnau1apa	98	58.472	ENSCAFG00020023584	TRNAU1AP	98	59.136	Canis_lupus_dingo
ENSTRUG00000003352	trnau1apa	99	57.895	ENSCHIG00000023215	TRNAU1AP	99	58.553	Capra_hircus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSTSYG00000003506	TRNAU1AP	98	59.136	Carlito_syrichta
ENSTRUG00000003352	trnau1apa	98	71.852	ENSCPOG00000001925	TRNAU1AP	98	58.804	Cavia_porcellus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSCCAG00000037506	TRNAU1AP	98	59.136	Cebus_capucinus
ENSTRUG00000003352	trnau1apa	98	58.140	ENSCATG00000044617	TRNAU1AP	87	69.863	Cercocebus_atys
ENSTRUG00000003352	trnau1apa	98	58.140	ENSCLAG00000008223	TRNAU1AP	98	58.804	Chinchilla_lanigera
ENSTRUG00000003352	trnau1apa	98	58.140	ENSCSAG00000001014	TRNAU1AP	98	58.804	Chlorocebus_sabaeus
ENSTRUG00000003352	trnau1apa	94	56.552	ENSCPBG00000000121	TRNAU1AP	99	57.241	Chrysemys_picta_bellii
ENSTRUG00000003352	trnau1apa	52	50.000	ENSCSAVG00000011781	-	84	50.000	Ciona_savignyi
ENSTRUG00000003352	trnau1apa	98	50.498	ENSCANG00000041949	TRNAU1AP	98	52.850	Colobus_angolensis_palliatus
ENSTRUG00000003352	trnau1apa	98	71.852	ENSCGRG00001004713	Trnau1ap	98	58.804	Cricetulus_griseus_chok1gshd
ENSTRUG00000003352	trnau1apa	98	71.852	ENSCGRG00000014532	Trnau1ap	98	58.804	Cricetulus_griseus_crigri
ENSTRUG00000003352	trnau1apa	100	73.548	ENSCSEG00000006663	trnau1apa	100	75.806	Cynoglossus_semilaevis
ENSTRUG00000003352	trnau1apa	99	76.221	ENSCVAG00000018069	trnau1apa	99	78.176	Cyprinodon_variegatus
ENSTRUG00000003352	trnau1apa	99	51.438	ENSDARG00000101323	trnau1apa	95	51.438	Danio_rerio
ENSTRUG00000003352	trnau1apa	57	61.494	ENSDNOG00000047959	-	90	61.494	Dasypus_novemcinctus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSDNOG00000033009	TRNAU1AP	98	59.136	Dasypus_novemcinctus
ENSTRUG00000003352	trnau1apa	97	55.892	ENSDORG00000006349	Trnau1ap	97	62.025	Dipodomys_ordii
ENSTRUG00000003352	trnau1apa	93	34.877	FBgn0031607	CG15440	95	35.000	Drosophila_melanogaster
ENSTRUG00000003352	trnau1apa	84	55.039	ENSETEG00000012594	TRNAU1AP	98	55.814	Echinops_telfairi
ENSTRUG00000003352	trnau1apa	56	46.591	ENSEBUG00000006349	-	56	46.591	Eptatretus_burgeri
ENSTRUG00000003352	trnau1apa	98	58.472	ENSEASG00005010062	TRNAU1AP	90	69.863	Equus_asinus_asinus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSECAG00000012980	TRNAU1AP	90	69.863	Equus_caballus
ENSTRUG00000003352	trnau1apa	93	80.682	ENSELUG00000022790	-	95	80.682	Esox_lucius
ENSTRUG00000003352	trnau1apa	100	71.383	ENSELUG00000017686	trnau1apa	100	72.524	Esox_lucius
ENSTRUG00000003352	trnau1apa	98	58.472	ENSFCAG00000013401	TRNAU1AP	98	59.136	Felis_catus
ENSTRUG00000003352	trnau1apa	94	55.862	ENSFALG00000001371	TRNAU1AP	99	57.388	Ficedula_albicollis
ENSTRUG00000003352	trnau1apa	99	58.224	ENSFDAG00000018599	TRNAU1AP	99	58.882	Fukomys_damarensis
ENSTRUG00000003352	trnau1apa	78	82.857	ENSFHEG00000018232	trnau1apa	91	77.455	Fundulus_heteroclitus
ENSTRUG00000003352	trnau1apa	100	62.136	ENSGMOG00000016508	trnau1apa	99	63.226	Gadus_morhua
ENSTRUG00000003352	trnau1apa	69	37.727	ENSGALG00000012721	C2H6orf52	90	37.165	Gallus_gallus
ENSTRUG00000003352	trnau1apa	98	55.814	ENSGALG00000001310	-	98	57.143	Gallus_gallus
ENSTRUG00000003352	trnau1apa	80	82.520	ENSGAFG00000004928	trnau1apa	95	84.921	Gambusia_affinis
ENSTRUG00000003352	trnau1apa	100	82.680	ENSGACG00000001443	trnau1apa	100	84.641	Gasterosteus_aculeatus
ENSTRUG00000003352	trnau1apa	94	56.552	ENSGAGG00000004940	TRNAU1AP	99	57.241	Gopherus_agassizii
ENSTRUG00000003352	trnau1apa	98	58.472	ENSGGOG00000003511	TRNAU1AP	98	59.136	Gorilla_gorilla
ENSTRUG00000003352	trnau1apa	100	95.556	ENSHBUG00000002510	trnau1apa	100	81.731	Haplochromis_burtoni
ENSTRUG00000003352	trnau1apa	98	58.472	ENSHGLG00000010380	TRNAU1AP	98	59.136	Heterocephalus_glaber_female
ENSTRUG00000003352	trnau1apa	98	56.478	ENSHGLG00100012699	TRNAU1AP	98	57.143	Heterocephalus_glaber_male
ENSTRUG00000003352	trnau1apa	99	75.405	ENSHCOG00000014770	trnau1apa	99	75.405	Hippocampus_comes
ENSTRUG00000003352	trnau1apa	98	58.472	ENSSTOG00000000079	TRNAU1AP	98	59.136	Ictidomys_tridecemlineatus
ENSTRUG00000003352	trnau1apa	98	71.852	ENSJJAG00000010128	Trnau1ap	98	58.804	Jaculus_jaculus
ENSTRUG00000003352	trnau1apa	100	79.935	ENSKMAG00000001230	trnau1apa	100	80.906	Kryptolebias_marmoratus
ENSTRUG00000003352	trnau1apa	100	78.165	ENSLBEG00000011683	trnau1apa	100	79.114	Labrus_bergylta
ENSTRUG00000003352	trnau1apa	99	50.000	ENSLACG00000005541	TRNAU1AP	99	50.968	Latimeria_chalumnae
ENSTRUG00000003352	trnau1apa	98	57.285	ENSLOCG00000004041	trnau1apa	99	57.285	Lepisosteus_oculatus
ENSTRUG00000003352	trnau1apa	98	58.804	ENSLAFG00000007628	TRNAU1AP	98	59.468	Loxodonta_africana
ENSTRUG00000003352	trnau1apa	98	71.852	ENSMFAG00000043751	TRNAU1AP	87	69.863	Macaca_fascicularis
ENSTRUG00000003352	trnau1apa	98	58.140	ENSMMUG00000006561	TRNAU1AP	98	58.804	Macaca_mulatta
ENSTRUG00000003352	trnau1apa	98	71.852	ENSMNEG00000044201	TRNAU1AP	87	69.863	Macaca_nemestrina
ENSTRUG00000003352	trnau1apa	98	71.852	ENSMLEG00000015649	TRNAU1AP	87	69.863	Mandrillus_leucophaeus
ENSTRUG00000003352	trnau1apa	99	82.315	ENSMAMG00000001247	trnau1apa	100	82.637	Mastacembelus_armatus
ENSTRUG00000003352	trnau1apa	100	81.433	ENSMZEG00005017722	trnau1apa	100	83.388	Maylandia_zebra
ENSTRUG00000003352	trnau1apa	96	56.463	ENSMGAG00000002105	TRNAU1AP	99	57.483	Meleagris_gallopavo
ENSTRUG00000003352	trnau1apa	98	58.472	ENSMICG00000008386	TRNAU1AP	98	59.136	Microcebus_murinus
ENSTRUG00000003352	trnau1apa	98	71.852	ENSMOCG00000011189	Trnau1ap	98	58.804	Microtus_ochrogaster
ENSTRUG00000003352	trnau1apa	100	75.000	ENSMMOG00000012107	trnau1apa	99	75.000	Mola_mola
ENSTRUG00000003352	trnau1apa	98	57.475	ENSMODG00000010927	TRNAU1AP	98	57.475	Monodelphis_domestica
ENSTRUG00000003352	trnau1apa	100	80.645	ENSMALG00000016778	trnau1apa	100	82.581	Monopterus_albus
ENSTRUG00000003352	trnau1apa	98	57.807	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	65.823	Mus_caroli
ENSTRUG00000003352	trnau1apa	98	57.807	ENSMUSG00000028898	Trnau1ap	92	65.823	Mus_musculus
ENSTRUG00000003352	trnau1apa	98	71.852	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSTRUG00000003352	trnau1apa	98	57.807	MGP_SPRETEiJ_G0027544	Trnau1ap	92	65.823	Mus_spretus
ENSTRUG00000003352	trnau1apa	99	58.553	ENSMPUG00000015511	TRNAU1AP	99	59.211	Mustela_putorius_furo
ENSTRUG00000003352	trnau1apa	98	58.472	ENSMLUG00000012586	TRNAU1AP	98	59.136	Myotis_lucifugus
ENSTRUG00000003352	trnau1apa	98	58.140	ENSNGAG00000015881	Trnau1ap	98	58.804	Nannospalax_galili
ENSTRUG00000003352	trnau1apa	100	69.032	ENSNBRG00000001758	trnau1apa	99	70.968	Neolamprologus_brichardi
ENSTRUG00000003352	trnau1apa	98	71.852	ENSNLEG00000009822	TRNAU1AP	98	59.136	Nomascus_leucogenys
ENSTRUG00000003352	trnau1apa	96	57.143	ENSMEUG00000006117	TRNAU1AP	99	56.463	Notamacropus_eugenii
ENSTRUG00000003352	trnau1apa	57	64.368	ENSOPRG00000007084	-	61	64.368	Ochotona_princeps
ENSTRUG00000003352	trnau1apa	98	71.852	ENSODEG00000002970	TRNAU1AP	98	58.804	Octodon_degus
ENSTRUG00000003352	trnau1apa	80	82.927	ENSONIG00000004715	trnau1apa	97	85.366	Oreochromis_niloticus
ENSTRUG00000003352	trnau1apa	92	45.423	ENSOANG00000005325	-	94	46.127	Ornithorhynchus_anatinus
ENSTRUG00000003352	trnau1apa	85	47.126	ENSOCUG00000006834	-	97	47.126	Oryctolagus_cuniculus
ENSTRUG00000003352	trnau1apa	98	50.167	ENSOCUG00000002353	-	98	50.167	Oryctolagus_cuniculus
ENSTRUG00000003352	trnau1apa	98	57.143	ENSOCUG00000011704	-	98	57.807	Oryctolagus_cuniculus
ENSTRUG00000003352	trnau1apa	100	77.273	ENSORLG00000010428	trnau1apa	100	78.247	Oryzias_latipes
ENSTRUG00000003352	trnau1apa	100	77.273	ENSORLG00020000926	trnau1ap	100	78.247	Oryzias_latipes_hni
ENSTRUG00000003352	trnau1apa	100	77.273	ENSORLG00015009858	trnau1ap	100	78.247	Oryzias_latipes_hsok
ENSTRUG00000003352	trnau1apa	100	78.571	ENSOMEG00000007873	trnau1apa	100	79.870	Oryzias_melastigma
ENSTRUG00000003352	trnau1apa	98	58.472	ENSOGAG00000002274	TRNAU1AP	98	59.136	Otolemur_garnettii
ENSTRUG00000003352	trnau1apa	99	57.895	ENSOARG00000002843	TRNAU1AP	99	58.553	Ovis_aries
ENSTRUG00000003352	trnau1apa	98	58.472	ENSPPAG00000033927	TRNAU1AP	98	59.136	Pan_paniscus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSPPRG00000004416	TRNAU1AP	98	59.136	Panthera_pardus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSPTIG00000016677	TRNAU1AP	98	59.136	Panthera_tigris_altaica
ENSTRUG00000003352	trnau1apa	90	51.228	ENSPTRG00000000434	-	94	52.982	Pan_troglodytes
ENSTRUG00000003352	trnau1apa	98	58.140	ENSPANG00000016019	TRNAU1AP	87	69.863	Papio_anubis
ENSTRUG00000003352	trnau1apa	92	80.682	ENSPKIG00000022205	-	95	80.682	Paramormyrops_kingsleyae
ENSTRUG00000003352	trnau1apa	93	58.276	ENSPKIG00000015511	trnau1apa	93	58.276	Paramormyrops_kingsleyae
ENSTRUG00000003352	trnau1apa	94	56.552	ENSPSIG00000006864	TRNAU1AP	99	57.241	Pelodiscus_sinensis
ENSTRUG00000003352	trnau1apa	97	68.475	ENSPMGG00000023893	trnau1apa	96	68.475	Periophthalmus_magnuspinnatus
ENSTRUG00000003352	trnau1apa	98	71.111	ENSPEMG00000007877	Trnau1ap	98	58.472	Peromyscus_maniculatus_bairdii
ENSTRUG00000003352	trnau1apa	74	50.439	ENSPMAG00000005934	trnau1apa	96	50.439	Petromyzon_marinus
ENSTRUG00000003352	trnau1apa	56	52.601	ENSPMAG00000000592	trnau1apa	95	52.601	Petromyzon_marinus
ENSTRUG00000003352	trnau1apa	99	75.896	ENSPFOG00000008100	trnau1apa	99	78.827	Poecilia_formosa
ENSTRUG00000003352	trnau1apa	95	74.915	ENSPLAG00000010236	trnau1apa	99	77.966	Poecilia_latipinna
ENSTRUG00000003352	trnau1apa	99	73.856	ENSPMEG00000016387	trnau1apa	97	76.797	Poecilia_mexicana
ENSTRUG00000003352	trnau1apa	88	84.211	ENSPREG00000019821	trnau1apa	98	84.211	Poecilia_reticulata
ENSTRUG00000003352	trnau1apa	88	48.727	ENSPPYG00000001639	-	99	50.730	Pongo_abelii
ENSTRUG00000003352	trnau1apa	98	58.472	ENSPCOG00000027712	-	98	59.136	Propithecus_coquereli
ENSTRUG00000003352	trnau1apa	70	69.697	ENSPCOG00000023470	-	99	47.492	Propithecus_coquereli
ENSTRUG00000003352	trnau1apa	98	58.472	ENSPVAG00000017214	TRNAU1AP	98	59.136	Pteropus_vampyrus
ENSTRUG00000003352	trnau1apa	100	84.444	ENSPNYG00000010130	trnau1apa	99	84.170	Pundamilia_nyererei
ENSTRUG00000003352	trnau1apa	99	52.303	ENSPNAG00000024905	trnau1apa	97	52.303	Pygocentrus_nattereri
ENSTRUG00000003352	trnau1apa	82	59.289	ENSRNOG00000055344	Trnau1ap	82	60.079	Rattus_norvegicus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSRBIG00000029083	TRNAU1AP	98	59.136	Rhinopithecus_bieti
ENSTRUG00000003352	trnau1apa	98	58.472	ENSRROG00000029128	TRNAU1AP	98	59.136	Rhinopithecus_roxellana
ENSTRUG00000003352	trnau1apa	98	58.472	ENSSBOG00000021299	TRNAU1AP	98	59.136	Saimiri_boliviensis_boliviensis
ENSTRUG00000003352	trnau1apa	98	57.143	ENSSHAG00000008108	TRNAU1AP	98	57.143	Sarcophilus_harrisii
ENSTRUG00000003352	trnau1apa	100	77.097	ENSSMAG00000020851	trnau1apa	100	81.350	Scophthalmus_maximus
ENSTRUG00000003352	trnau1apa	100	81.150	ENSSDUG00000011734	trnau1apa	100	83.067	Seriola_dumerili
ENSTRUG00000003352	trnau1apa	100	66.340	ENSSLDG00000012101	trnau1apa	99	68.301	Seriola_lalandi_dorsalis
ENSTRUG00000003352	trnau1apa	96	56.610	ENSSARG00000007536	TRNAU1AP	99	58.844	Sorex_araneus
ENSTRUG00000003352	trnau1apa	98	52.961	ENSSPUG00000010400	-	99	54.485	Sphenodon_punctatus
ENSTRUG00000003352	trnau1apa	63	45.596	ENSSPUG00000010415	-	99	45.596	Sphenodon_punctatus
ENSTRUG00000003352	trnau1apa	100	83.819	ENSSPAG00000005029	trnau1apa	100	85.761	Stegastes_partitus
ENSTRUG00000003352	trnau1apa	98	58.472	ENSSSCG00000030284	TRNAU1AP	98	59.136	Sus_scrofa
ENSTRUG00000003352	trnau1apa	96	56.122	ENSTGUG00000000735	-	99	57.966	Taeniopygia_guttata
ENSTRUG00000003352	trnau1apa	69	37.615	ENSTGUG00000005908	-	99	40.654	Taeniopygia_guttata
ENSTRUG00000003352	trnau1apa	100	84.641	ENSTNIG00000006129	trnau1apa	100	87.255	Tetraodon_nigroviridis
ENSTRUG00000003352	trnau1apa	84	53.101	ENSTBEG00000008049	-	98	53.101	Tupaia_belangeri
ENSTRUG00000003352	trnau1apa	98	58.472	ENSTTRG00000001854	TRNAU1AP	98	59.136	Tursiops_truncatus
ENSTRUG00000003352	trnau1apa	94	58.276	ENSUAMG00000008789	TRNAU1AP	99	58.966	Ursus_americanus
ENSTRUG00000003352	trnau1apa	98	58.140	ENSUMAG00000011068	TRNAU1AP	98	58.804	Ursus_maritimus
ENSTRUG00000003352	trnau1apa	98	50.799	ENSVPAG00000006778	TRNAU1AP	99	51.438	Vicugna_pacos
ENSTRUG00000003352	trnau1apa	97	57.860	ENSVVUG00000012518	TRNAU1AP	91	58.528	Vulpes_vulpes
ENSTRUG00000003352	trnau1apa	99	75.570	ENSXMAG00000017361	trnau1apa	99	79.153	Xiphophorus_maculatus