EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003369 (Gene tree)
Gene ID: -
Gene Symbol: sall3b
Alias: -
Full Name: spalt-like transcription factor 3b
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5517 bases
Position: chrHE591867.1:118407-123923
Accession: ZDB-GENE-030131-9140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007886	zf-C2H2	PF00096.26	2e-26	1	5
ENSTRUP00000007886	zf-C2H2	PF00096.26	2e-26	2	5
ENSTRUP00000007886	zf-C2H2	PF00096.26	2e-26	3	5
ENSTRUP00000007886	zf-C2H2	PF00096.26	2e-26	4	5
ENSTRUP00000007886	zf-C2H2	PF00096.26	2e-26	5	5
ENSTRUP00000007886	zf-met	PF12874.7	3.9e-16	1	4
ENSTRUP00000007886	zf-met	PF12874.7	3.9e-16	2	4
ENSTRUP00000007886	zf-met	PF12874.7	3.9e-16	3	4
ENSTRUP00000007886	zf-met	PF12874.7	3.9e-16	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000007933	-	2838	-	ENSTRUP00000007886	945 (aa)	-	H2S664

Gene Model

Click here to download ENSTRUG00000003369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003369	sall3b	57	37.838	ENSTRUG00000021765	-	51	45.312
ENSTRUG00000003369	sall3b	56	43.750	ENSTRUG00000013906	-	91	43.750
ENSTRUG00000003369	sall3b	55	36.585	ENSTRUG00000014476	-	52	36.585
ENSTRUG00000003369	sall3b	99	65.957	ENSTRUG00000008950	sall1a	84	65.217
ENSTRUG00000003369	sall3b	57	43.750	ENSTRUG00000019483	-	90	50.000
ENSTRUG00000003369	sall3b	56	39.655	ENSTRUG00000006896	-	86	39.655
ENSTRUG00000003369	sall3b	68	65.217	ENSTRUG00000017423	sall3a	62	65.217
ENSTRUG00000003369	sall3b	58	40.625	ENSTRUG00000022843	-	65	45.652
ENSTRUG00000003369	sall3b	57	48.837	ENSTRUG00000000995	-	78	46.875
ENSTRUG00000003369	sall3b	56	43.750	ENSTRUG00000001268	-	86	50.000
ENSTRUG00000003369	sall3b	57	50.000	ENSTRUG00000008615	zbtb48	53	53.333
ENSTRUG00000003369	sall3b	57	50.000	ENSTRUG00000005321	-	91	50.000
ENSTRUG00000003369	sall3b	58	42.029	ENSTRUG00000012273	-	71	43.636
ENSTRUG00000003369	sall3b	55	32.258	ENSTRUG00000012157	-	62	31.132
ENSTRUG00000003369	sall3b	57	54.167	ENSTRUG00000015687	-	97	54.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003369	sall3b	67	67.391	ENSG00000256463	SALL3	75	65.217	Homo_sapiens
ENSTRUG00000003369	sall3b	98	70.536	ENSAPOG00000004264	sall3b	76	66.935	Acanthochromis_polyacanthus
ENSTRUG00000003369	sall3b	97	65.217	ENSAMEG00000010206	SALL3	50	65.217	Ailuropoda_melanoleuca
ENSTRUG00000003369	sall3b	66	73.894	ENSACIG00000019407	sall3b	69	73.593	Amphilophus_citrinellus
ENSTRUG00000003369	sall3b	68	65.217	ENSACIG00000014041	sall3a	65	65.217	Amphilophus_citrinellus
ENSTRUG00000003369	sall3b	99	66.935	ENSAOCG00000012779	sall3b	76	66.935	Amphiprion_ocellaris
ENSTRUG00000003369	sall3b	66	67.391	ENSAOCG00000010863	sall3a	58	67.391	Amphiprion_ocellaris
ENSTRUG00000003369	sall3b	68	70.940	ENSAPEG00000018170	sall3b	66	72.558	Amphiprion_percula
ENSTRUG00000003369	sall3b	97	65.217	ENSATEG00000024524	sall3a	75	65.217	Anabas_testudineus
ENSTRUG00000003369	sall3b	95	71.296	ENSATEG00000004914	sall3b	75	69.643	Anabas_testudineus
ENSTRUG00000003369	sall3b	99	67.391	ENSANAG00000032412	SALL3	78	67.391	Aotus_nancymaae
ENSTRUG00000003369	sall3b	65	65.217	ENSACLG00000022451	sall3a	60	65.217	Astatotilapia_calliptera
ENSTRUG00000003369	sall3b	97	70.339	ENSACLG00000001619	sall3b	75	70.339	Astatotilapia_calliptera
ENSTRUG00000003369	sall3b	97	67.391	ENSAMXG00000011185	sall3a	63	67.391	Astyanax_mexicanus
ENSTRUG00000003369	sall3b	68	67.391	ENSAMXG00000035442	sall3b	72	67.391	Astyanax_mexicanus
ENSTRUG00000003369	sall3b	99	67.391	ENSBTAG00000050200	SALL3	76	67.391	Bos_taurus
ENSTRUG00000003369	sall3b	83	65.217	ENSCAFG00020015092	SALL3	52	65.217	Canis_lupus_dingo
ENSTRUG00000003369	sall3b	87	67.391	ENSCHIG00000000145	SALL3	68	67.391	Capra_hircus
ENSTRUG00000003369	sall3b	60	67.391	ENSTSYG00000028846	SALL3	60	67.391	Carlito_syrichta
ENSTRUG00000003369	sall3b	77	67.391	ENSCAPG00000006496	SALL3	61	67.391	Cavia_aperea
ENSTRUG00000003369	sall3b	64	67.391	ENSCPOG00000008546	SALL3	73	67.391	Cavia_porcellus
ENSTRUG00000003369	sall3b	68	67.391	ENSCATG00000029727	SALL3	84	67.391	Cercocebus_atys
ENSTRUG00000003369	sall3b	63	67.391	ENSCSAG00000018244	SALL3	76	67.391	Chlorocebus_sabaeus
ENSTRUG00000003369	sall3b	99	67.391	ENSCPBG00000003657	SALL3	76	67.391	Chrysemys_picta_bellii
ENSTRUG00000003369	sall3b	66	67.391	ENSCANG00000030302	SALL3	63	67.391	Colobus_angolensis_palliatus
ENSTRUG00000003369	sall3b	99	67.391	ENSCGRG00001018203	Sall3	54	67.391	Cricetulus_griseus_chok1gshd
ENSTRUG00000003369	sall3b	66	69.623	ENSCSEG00000009569	sall3b	65	69.977	Cynoglossus_semilaevis
ENSTRUG00000003369	sall3b	67	65.217	ENSCVAG00000009684	sall3a	60	65.217	Cyprinodon_variegatus
ENSTRUG00000003369	sall3b	97	94.118	ENSCVAG00000017005	sall3b	79	94.118	Cyprinodon_variegatus
ENSTRUG00000003369	sall3b	94	67.391	ENSDARG00000057586	sall3b	74	67.391	Danio_rerio
ENSTRUG00000003369	sall3b	63	67.391	ENSDNOG00000025483	SALL3	62	67.391	Dasypus_novemcinctus
ENSTRUG00000003369	sall3b	60	65.217	ENSDORG00000002702	Sall3	58	65.217	Dipodomys_ordii
ENSTRUG00000003369	sall3b	66	70.270	ENSETEG00000001481	SALL3	61	70.270	Echinops_telfairi
ENSTRUG00000003369	sall3b	99	67.391	ENSELUG00000009541	sall3b	76	67.391	Esox_lucius
ENSTRUG00000003369	sall3b	65	65.217	ENSGAFG00000001581	sall3a	62	65.217	Gambusia_affinis
ENSTRUG00000003369	sall3b	83	61.538	ENSGAFG00000014435	-	77	61.538	Gambusia_affinis
ENSTRUG00000003369	sall3b	95	68.182	ENSGACG00000002533	sall3b	77	68.182	Gasterosteus_aculeatus
ENSTRUG00000003369	sall3b	68	67.391	ENSGGOG00000008127	SALL3	67	67.391	Gorilla_gorilla
ENSTRUG00000003369	sall3b	72	72.650	ENSHBUG00000018127	sall3b	68	73.148	Haplochromis_burtoni
ENSTRUG00000003369	sall3b	99	61.538	ENSHCOG00000004745	sall3b	89	61.538	Hippocampus_comes
ENSTRUG00000003369	sall3b	99	65.217	ENSHCOG00000010423	sall3a	63	65.217	Hippocampus_comes
ENSTRUG00000003369	sall3b	99	67.391	ENSJJAG00000014351	Sall3	76	67.391	Jaculus_jaculus
ENSTRUG00000003369	sall3b	65	65.217	ENSKMAG00000003846	sall3a	62	65.217	Kryptolebias_marmoratus
ENSTRUG00000003369	sall3b	93	67.391	ENSKMAG00000012418	sall3b	74	67.391	Kryptolebias_marmoratus
ENSTRUG00000003369	sall3b	61	65.217	ENSLBEG00000005152	sall3a	76	65.217	Labrus_bergylta
ENSTRUG00000003369	sall3b	68	77.670	ENSLBEG00000015706	sall3b	66	77.670	Labrus_bergylta
ENSTRUG00000003369	sall3b	63	67.391	ENSMFAG00000031402	SALL3	84	67.391	Macaca_fascicularis
ENSTRUG00000003369	sall3b	63	67.391	ENSMNEG00000029916	SALL3	58	67.391	Macaca_nemestrina
ENSTRUG00000003369	sall3b	70	72.271	ENSMAMG00000006101	sall3b	69	73.853	Mastacembelus_armatus
ENSTRUG00000003369	sall3b	97	71.186	ENSMZEG00005026224	sall3b	75	71.186	Maylandia_zebra
ENSTRUG00000003369	sall3b	65	65.217	ENSMZEG00005007586	sall3a	60	65.217	Maylandia_zebra
ENSTRUG00000003369	sall3b	99	67.391	ENSMAUG00000011828	Sall3	54	67.391	Mesocricetus_auratus
ENSTRUG00000003369	sall3b	71	67.391	ENSMICG00000017395	SALL3	70	67.391	Microcebus_murinus
ENSTRUG00000003369	sall3b	68	65.217	ENSMMOG00000003253	sall3a	65	65.217	Mola_mola
ENSTRUG00000003369	sall3b	69	74.214	ENSMMOG00000014246	sall3b	70	75.000	Mola_mola
ENSTRUG00000003369	sall3b	83	65.217	ENSMPUG00000016646	SALL3	51	65.217	Mustela_putorius_furo
ENSTRUG00000003369	sall3b	97	67.391	ENSMLUG00000010582	SALL3	51	67.391	Myotis_lucifugus
ENSTRUG00000003369	sall3b	74	75.676	ENSNBRG00000016034	sall3b	67	73.611	Neolamprologus_brichardi
ENSTRUG00000003369	sall3b	68	67.391	ENSNLEG00000008217	SALL3	76	67.391	Nomascus_leucogenys
ENSTRUG00000003369	sall3b	61	67.391	ENSODEG00000002692	SALL3	55	67.391	Octodon_degus
ENSTRUG00000003369	sall3b	97	68.548	ENSONIG00000013791	sall3b	76	68.548	Oreochromis_niloticus
ENSTRUG00000003369	sall3b	81	65.217	ENSOCUG00000029398	SALL3	70	65.217	Oryctolagus_cuniculus
ENSTRUG00000003369	sall3b	98	65.217	ENSORLG00000020718	sall3a	79	65.217	Oryzias_latipes
ENSTRUG00000003369	sall3b	61	88.462	ENSORLG00000024765	-	98	88.462	Oryzias_latipes
ENSTRUG00000003369	sall3b	99	59.259	ENSORLG00020015105	sall3b	73	61.538	Oryzias_latipes_hni
ENSTRUG00000003369	sall3b	96	65.217	ENSORLG00020001794	sall3a	74	65.217	Oryzias_latipes_hni
ENSTRUG00000003369	sall3b	99	61.538	ENSORLG00015005877	sall3b	96	73.913	Oryzias_latipes_hsok
ENSTRUG00000003369	sall3b	96	65.217	ENSORLG00015018152	sall3a	74	65.217	Oryzias_latipes_hsok
ENSTRUG00000003369	sall3b	62	67.391	ENSOGAG00000031681	SALL3	76	67.391	Otolemur_garnettii
ENSTRUG00000003369	sall3b	68	67.391	ENSOARG00000004353	SALL3	61	67.391	Ovis_aries
ENSTRUG00000003369	sall3b	70	68.182	ENSPPAG00000029586	-	67	68.182	Pan_paniscus
ENSTRUG00000003369	sall3b	68	67.391	ENSPTRG00000010126	SALL3	67	67.391	Pan_troglodytes
ENSTRUG00000003369	sall3b	69	67.391	ENSPANG00000006485	SALL3	82	67.391	Papio_anubis
ENSTRUG00000003369	sall3b	96	67.391	ENSPKIG00000018271	SALL3	70	67.391	Paramormyrops_kingsleyae
ENSTRUG00000003369	sall3b	99	67.391	ENSPKIG00000013427	sall3a	84	67.391	Paramormyrops_kingsleyae
ENSTRUG00000003369	sall3b	96	67.391	ENSPSIG00000008556	SALL3	51	67.391	Pelodiscus_sinensis
ENSTRUG00000003369	sall3b	65	66.744	ENSPMGG00000002913	sall3b	68	66.276	Periophthalmus_magnuspinnatus
ENSTRUG00000003369	sall3b	94	85.000	ENSPFOG00000013292	sall3b	74	81.818	Poecilia_formosa
ENSTRUG00000003369	sall3b	61	65.217	ENSPFOG00000019127	sall3a	50	65.217	Poecilia_formosa
ENSTRUG00000003369	sall3b	96	65.217	ENSPLAG00000018123	sall3a	63	65.217	Poecilia_latipinna
ENSTRUG00000003369	sall3b	94	85.000	ENSPLAG00000013919	sall3b	75	81.818	Poecilia_latipinna
ENSTRUG00000003369	sall3b	58	83.333	ENSPMEG00000023703	sall3b	77	67.391	Poecilia_mexicana
ENSTRUG00000003369	sall3b	61	65.217	ENSPMEG00000014946	sall3a	54	65.217	Poecilia_mexicana
ENSTRUG00000003369	sall3b	89	80.303	ENSPREG00000015079	sall3b	74	80.303	Poecilia_reticulata
ENSTRUG00000003369	sall3b	61	65.217	ENSPREG00000014420	sall3a	52	65.217	Poecilia_reticulata
ENSTRUG00000003369	sall3b	62	67.391	ENSPPYG00000009253	SALL3	73	67.391	Pongo_abelii
ENSTRUG00000003369	sall3b	68	67.391	ENSPCOG00000012553	SALL3	69	67.391	Propithecus_coquereli
ENSTRUG00000003369	sall3b	72	74.336	ENSPNYG00000005353	sall3b	68	74.336	Pundamilia_nyererei
ENSTRUG00000003369	sall3b	83	67.391	ENSRNOG00000026116	Sall3	52	67.391	Rattus_norvegicus
ENSTRUG00000003369	sall3b	70	67.391	ENSRROG00000034130	SALL3	69	67.391	Rhinopithecus_roxellana
ENSTRUG00000003369	sall3b	60	67.391	ENSSBOG00000023380	SALL3	63	67.391	Saimiri_boliviensis_boliviensis
ENSTRUG00000003369	sall3b	96	67.391	ENSSFOG00015012223	sall3a	76	67.391	Scleropages_formosus
ENSTRUG00000003369	sall3b	98	67.391	ENSSFOG00015009159	SALL3	66	67.391	Scleropages_formosus
ENSTRUG00000003369	sall3b	98	71.681	ENSSMAG00000019762	sall3b	77	71.681	Scophthalmus_maximus
ENSTRUG00000003369	sall3b	75	73.504	ENSSDUG00000010584	sall3b	69	74.043	Seriola_dumerili
ENSTRUG00000003369	sall3b	99	69.672	ENSSLDG00000016800	sall3b	78	69.672	Seriola_lalandi_dorsalis
ENSTRUG00000003369	sall3b	64	72.622	ENSSPAG00000003172	sall3b	66	72.558	Stegastes_partitus
ENSTRUG00000003369	sall3b	66	65.217	ENSSPAG00000013114	sall3a	79	65.217	Stegastes_partitus
ENSTRUG00000003369	sall3b	99	67.391	ENSSSCG00000004858	SALL3	76	67.391	Sus_scrofa
ENSTRUG00000003369	sall3b	63	67.391	ENSTTRG00000004958	SALL3	57	67.391	Tursiops_truncatus
ENSTRUG00000003369	sall3b	67	65.217	ENSUAMG00000016908	SALL3	68	65.217	Ursus_americanus
ENSTRUG00000003369	sall3b	60	65.217	ENSVVUG00000018838	SALL3	61	65.217	Vulpes_vulpes
ENSTRUG00000003369	sall3b	91	52.308	ENSXCOG00000018799	sall3b	66	65.808	Xiphophorus_couchianus
ENSTRUG00000003369	sall3b	61	65.217	ENSXMAG00000023447	sall3a	55	65.217	Xiphophorus_maculatus
ENSTRUG00000003369	sall3b	95	63.830	ENSXMAG00000000798	sall3b	64	66.042	Xiphophorus_maculatus