EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000003374 (Gene tree)
Gene ID: 101074221
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3404 bases
Position: chrHE591985.1:53779-57182
Accession: 101074221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007897	PRP38	PF03371.15	4.2e-63	1	1
ENSTRUP00000007898	PRP38	PF03371.15	5.4e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000007945	-	1920	-	ENSTRUP00000007898	361 (aa)	-	H2S676
ENSTRUT00000007944	-	1765	XM_003976536	ENSTRUP00000007897	326 (aa)	XP_003976585	H2S675

Gene Model

Click here to download ENSTRUG00000003374's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003374's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003374	prpf38a	71	87.446	ENSG00000134748	PRPF38A	71	88.235	Homo_sapiens
ENSTRUG00000003374	prpf38a	78	95.276	ENSAPOG00000011652	prpf38a	72	95.475	Acanthochromis_polyacanthus
ENSTRUG00000003374	prpf38a	71	87.446	ENSAMEG00000009319	PRPF38A	71	88.235	Ailuropoda_melanoleuca
ENSTRUG00000003374	prpf38a	68	92.342	ENSACIG00000012292	prpf38a	73	92.342	Amphilophus_citrinellus
ENSTRUG00000003374	prpf38a	78	95.276	ENSAOCG00000018004	prpf38a	72	95.475	Amphiprion_ocellaris
ENSTRUG00000003374	prpf38a	78	95.276	ENSAPEG00000021414	prpf38a	72	95.475	Amphiprion_percula
ENSTRUG00000003374	prpf38a	68	93.665	ENSATEG00000004608	prpf38a	72	93.665	Anabas_testudineus
ENSTRUG00000003374	prpf38a	51	82.530	ENSAPLG00000005827	PRPF38A	63	83.333	Anas_platyrhynchos
ENSTRUG00000003374	prpf38a	71	85.714	ENSACAG00000008249	PRPF38A	71	86.425	Anolis_carolinensis
ENSTRUG00000003374	prpf38a	71	87.446	ENSANAG00000027839	PRPF38A	71	88.235	Aotus_nancymaae
ENSTRUG00000003374	prpf38a	71	57.021	ENSANAG00000029204	-	70	56.889	Aotus_nancymaae
ENSTRUG00000003374	prpf38a	68	93.213	ENSACLG00000021595	prpf38a	74	93.213	Astatotilapia_calliptera
ENSTRUG00000003374	prpf38a	68	94.118	ENSAMXG00000029274	prpf38a	71	94.118	Astyanax_mexicanus
ENSTRUG00000003374	prpf38a	78	81.712	ENSBTAG00000002720	PRPF38A	75	88.235	Bos_taurus
ENSTRUG00000003374	prpf38a	60	63.077	WBGene00008380	prp-38	59	64.894	Caenorhabditis_elegans
ENSTRUG00000003374	prpf38a	71	87.446	ENSCJAG00000021594	PRPF38A	74	88.235	Callithrix_jacchus
ENSTRUG00000003374	prpf38a	71	87.446	ENSCAFG00000003740	PRPF38A	71	88.235	Canis_familiaris
ENSTRUG00000003374	prpf38a	71	87.446	ENSCAFG00020010939	PRPF38A	71	88.235	Canis_lupus_dingo
ENSTRUG00000003374	prpf38a	71	87.446	ENSCHIG00000024730	PRPF38A	71	88.235	Capra_hircus
ENSTRUG00000003374	prpf38a	71	87.446	ENSTSYG00000009868	-	71	88.235	Carlito_syrichta
ENSTRUG00000003374	prpf38a	58	84.043	ENSTSYG00000031994	-	63	84.831	Carlito_syrichta
ENSTRUG00000003374	prpf38a	78	84.252	ENSCPOG00000005079	PRPF38A	71	88.235	Cavia_porcellus
ENSTRUG00000003374	prpf38a	71	87.446	ENSCCAG00000026502	PRPF38A	71	88.235	Cebus_capucinus
ENSTRUG00000003374	prpf38a	58	56.614	ENSCATG00000044190	-	64	58.252	Cercocebus_atys
ENSTRUG00000003374	prpf38a	71	87.446	ENSCATG00000032296	PRPF38A	71	88.235	Cercocebus_atys
ENSTRUG00000003374	prpf38a	71	87.446	ENSCLAG00000005816	PRPF38A	71	88.235	Chinchilla_lanigera
ENSTRUG00000003374	prpf38a	71	86.147	ENSCPBG00000014791	PRPF38A	71	86.878	Chrysemys_picta_bellii
ENSTRUG00000003374	prpf38a	71	67.965	ENSCSAVG00000009580	-	71	70.046	Ciona_savignyi
ENSTRUG00000003374	prpf38a	71	87.446	ENSCANG00000032608	PRPF38A	74	88.235	Colobus_angolensis_palliatus
ENSTRUG00000003374	prpf38a	71	87.446	ENSCGRG00001018502	-	71	88.235	Cricetulus_griseus_chok1gshd
ENSTRUG00000003374	prpf38a	71	73.593	ENSCGRG00001002557	-	74	74.661	Cricetulus_griseus_chok1gshd
ENSTRUG00000003374	prpf38a	71	87.446	ENSCGRG00000014868	Prpf38a	71	88.235	Cricetulus_griseus_crigri
ENSTRUG00000003374	prpf38a	68	91.855	ENSCSEG00000001269	prpf38a	76	91.855	Cynoglossus_semilaevis
ENSTRUG00000003374	prpf38a	68	95.023	ENSCVAG00000012305	prpf38a	72	95.023	Cyprinodon_variegatus
ENSTRUG00000003374	prpf38a	68	92.760	ENSDARG00000039213	prpf38a	71	92.760	Danio_rerio
ENSTRUG00000003374	prpf38a	71	87.446	ENSDNOG00000042326	PRPF38A	72	88.235	Dasypus_novemcinctus
ENSTRUG00000003374	prpf38a	78	75.197	ENSDORG00000023691	-	75	81.193	Dipodomys_ordii
ENSTRUG00000003374	prpf38a	63	96.875	ENSDORG00000023857	-	72	96.875	Dipodomys_ordii
ENSTRUG00000003374	prpf38a	78	75.197	ENSDORG00000025371	-	75	81.193	Dipodomys_ordii
ENSTRUG00000003374	prpf38a	64	70.142	FBgn0050342	Prp38	57	74.468	Drosophila_melanogaster
ENSTRUG00000003374	prpf38a	73	81.590	ENSEBUG00000012588	prpf38a	71	81.166	Eptatretus_burgeri
ENSTRUG00000003374	prpf38a	71	87.446	ENSEASG00005014427	PRPF38A	71	88.235	Equus_asinus_asinus
ENSTRUG00000003374	prpf38a	71	87.446	ENSECAG00000022628	PRPF38A	71	88.235	Equus_caballus
ENSTRUG00000003374	prpf38a	68	93.665	ENSELUG00000021094	prpf38a	75	93.665	Esox_lucius
ENSTRUG00000003374	prpf38a	71	87.446	ENSFCAG00000002518	PRPF38A	71	88.235	Felis_catus
ENSTRUG00000003374	prpf38a	70	81.057	ENSFALG00000003612	-	73	82.110	Ficedula_albicollis
ENSTRUG00000003374	prpf38a	58	83.684	ENSFALG00000005598	-	66	84.444	Ficedula_albicollis
ENSTRUG00000003374	prpf38a	78	84.252	ENSFDAG00000011287	PRPF38A	72	88.235	Fukomys_damarensis
ENSTRUG00000003374	prpf38a	67	94.009	ENSFHEG00000014317	prpf38a	75	93.665	Fundulus_heteroclitus
ENSTRUG00000003374	prpf38a	51	96.386	ENSGMOG00000011384	prpf38a	54	96.386	Gadus_morhua
ENSTRUG00000003374	prpf38a	71	86.580	ENSGALG00000010627	PRPF38A	71	87.330	Gallus_gallus
ENSTRUG00000003374	prpf38a	68	94.118	ENSGAFG00000012422	prpf38a	72	94.118	Gambusia_affinis
ENSTRUG00000003374	prpf38a	68	94.170	ENSGACG00000005423	prpf38a	72	94.170	Gasterosteus_aculeatus
ENSTRUG00000003374	prpf38a	71	86.147	ENSGAGG00000020547	PRPF38A	71	86.878	Gopherus_agassizii
ENSTRUG00000003374	prpf38a	71	87.446	ENSGGOG00000003940	PRPF38A	71	88.235	Gorilla_gorilla
ENSTRUG00000003374	prpf38a	58	94.180	ENSHBUG00000020572	prpf38a	80	94.149	Haplochromis_burtoni
ENSTRUG00000003374	prpf38a	71	87.446	ENSHGLG00000000475	PRPF38A	71	88.235	Heterocephalus_glaber_female
ENSTRUG00000003374	prpf38a	70	77.193	ENSHGLG00000007918	-	71	76.471	Heterocephalus_glaber_female
ENSTRUG00000003374	prpf38a	71	87.446	ENSHGLG00100008935	PRPF38A	71	88.235	Heterocephalus_glaber_male
ENSTRUG00000003374	prpf38a	70	77.193	ENSHGLG00100003928	-	71	76.471	Heterocephalus_glaber_male
ENSTRUG00000003374	prpf38a	56	93.407	ENSHCOG00000020781	prpf38a	59	93.617	Hippocampus_comes
ENSTRUG00000003374	prpf38a	71	91.379	ENSIPUG00000005757	prpf38a	71	91.441	Ictalurus_punctatus
ENSTRUG00000003374	prpf38a	71	87.446	ENSSTOG00000015610	PRPF38A	71	88.235	Ictidomys_tridecemlineatus
ENSTRUG00000003374	prpf38a	71	86.580	ENSJJAG00000015811	Prpf38a	71	87.330	Jaculus_jaculus
ENSTRUG00000003374	prpf38a	68	95.023	ENSKMAG00000006588	prpf38a	72	95.023	Kryptolebias_marmoratus
ENSTRUG00000003374	prpf38a	68	95.475	ENSLBEG00000020585	prpf38a	72	95.475	Labrus_bergylta
ENSTRUG00000003374	prpf38a	69	87.111	ENSLACG00000011495	PRPF38A	71	87.330	Latimeria_chalumnae
ENSTRUG00000003374	prpf38a	68	89.640	ENSLOCG00000006262	prpf38a	72	90.090	Lepisosteus_oculatus
ENSTRUG00000003374	prpf38a	71	87.446	ENSLAFG00000025862	PRPF38A	71	88.235	Loxodonta_africana
ENSTRUG00000003374	prpf38a	71	87.446	ENSMFAG00000039449	PRPF38A	74	88.235	Macaca_fascicularis
ENSTRUG00000003374	prpf38a	58	84.737	ENSMMUG00000014333	PRPF38A	65	85.083	Macaca_mulatta
ENSTRUG00000003374	prpf38a	58	57.143	ENSMNEG00000040242	-	65	58.454	Macaca_nemestrina
ENSTRUG00000003374	prpf38a	71	87.446	ENSMNEG00000031221	PRPF38A	71	88.235	Macaca_nemestrina
ENSTRUG00000003374	prpf38a	71	87.446	ENSMLEG00000041105	PRPF38A	71	88.235	Mandrillus_leucophaeus
ENSTRUG00000003374	prpf38a	68	95.023	ENSMAMG00000015431	prpf38a	74	95.023	Mastacembelus_armatus
ENSTRUG00000003374	prpf38a	68	93.213	ENSMZEG00005017838	prpf38a	72	93.213	Maylandia_zebra
ENSTRUG00000003374	prpf38a	71	86.580	ENSMGAG00000011176	PRPF38A	74	87.330	Meleagris_gallopavo
ENSTRUG00000003374	prpf38a	70	83.333	ENSMAUG00000018029	-	84	83.710	Mesocricetus_auratus
ENSTRUG00000003374	prpf38a	71	87.446	ENSMICG00000014193	PRPF38A	71	88.235	Microcebus_murinus
ENSTRUG00000003374	prpf38a	71	87.446	ENSMOCG00000013080	Prpf38a	71	88.235	Microtus_ochrogaster
ENSTRUG00000003374	prpf38a	78	93.487	ENSMMOG00000016972	prpf38a	92	93.487	Mola_mola
ENSTRUG00000003374	prpf38a	71	84.483	ENSMODG00000000644	PRPF38A	71	85.135	Monodelphis_domestica
ENSTRUG00000003374	prpf38a	68	95.928	ENSMALG00000019363	prpf38a	69	95.928	Monopterus_albus
ENSTRUG00000003374	prpf38a	71	87.013	MGP_CAROLIEiJ_G0026269	Prpf38a	71	87.783	Mus_caroli
ENSTRUG00000003374	prpf38a	71	87.013	ENSMUSG00000063800	Prpf38a	71	87.783	Mus_musculus
ENSTRUG00000003374	prpf38a	71	87.013	MGP_PahariEiJ_G0028602	Prpf38a	71	87.783	Mus_pahari
ENSTRUG00000003374	prpf38a	71	87.013	MGP_SPRETEiJ_G0027238	Prpf38a	93	91.489	Mus_spretus
ENSTRUG00000003374	prpf38a	71	87.446	ENSMPUG00000006896	PRPF38A	71	88.235	Mustela_putorius_furo
ENSTRUG00000003374	prpf38a	71	87.446	ENSNGAG00000011884	Prpf38a	72	88.235	Nannospalax_galili
ENSTRUG00000003374	prpf38a	68	91.892	ENSNBRG00000004013	prpf38a	71	91.892	Neolamprologus_brichardi
ENSTRUG00000003374	prpf38a	70	51.316	ENSNLEG00000033398	-	60	51.598	Nomascus_leucogenys
ENSTRUG00000003374	prpf38a	64	86.538	ENSNLEG00000017999	PRPF38A	63	87.374	Nomascus_leucogenys
ENSTRUG00000003374	prpf38a	78	54.255	ENSNLEG00000012592	-	67	59.729	Nomascus_leucogenys
ENSTRUG00000003374	prpf38a	71	83.550	ENSMEUG00000003860	PRPF38A	71	84.163	Notamacropus_eugenii
ENSTRUG00000003374	prpf38a	70	87.719	ENSOPRG00000008985	PRPF38A	92	88.235	Ochotona_princeps
ENSTRUG00000003374	prpf38a	71	87.446	ENSODEG00000005869	PRPF38A	71	88.235	Octodon_degus
ENSTRUG00000003374	prpf38a	68	93.665	ENSONIG00000007816	prpf38a	72	93.665	Oreochromis_niloticus
ENSTRUG00000003374	prpf38a	71	44.635	ENSOANG00000009541	-	71	43.304	Ornithorhynchus_anatinus
ENSTRUG00000003374	prpf38a	71	87.446	ENSOCUG00000000963	PRPF38A	71	88.235	Oryctolagus_cuniculus
ENSTRUG00000003374	prpf38a	68	95.023	ENSORLG00000013485	prpf38a	79	95.023	Oryzias_latipes
ENSTRUG00000003374	prpf38a	68	95.023	ENSORLG00020002130	prpf38a	79	95.023	Oryzias_latipes_hni
ENSTRUG00000003374	prpf38a	71	91.775	ENSORLG00015021393	prpf38a	75	94.570	Oryzias_latipes_hsok
ENSTRUG00000003374	prpf38a	68	94.118	ENSOMEG00000016333	prpf38a	72	94.118	Oryzias_melastigma
ENSTRUG00000003374	prpf38a	71	87.446	ENSOGAG00000005423	PRPF38A	71	88.235	Otolemur_garnettii
ENSTRUG00000003374	prpf38a	71	87.446	ENSOARG00000005373	PRPF38A	71	88.235	Ovis_aries
ENSTRUG00000003374	prpf38a	80	66.920	ENSPPAG00000033867	-	68	69.683	Pan_paniscus
ENSTRUG00000003374	prpf38a	71	87.446	ENSPPAG00000030905	PRPF38A	71	88.235	Pan_paniscus
ENSTRUG00000003374	prpf38a	71	87.446	ENSPPRG00000013268	PRPF38A	71	88.235	Panthera_pardus
ENSTRUG00000003374	prpf38a	71	87.446	ENSPTIG00000015419	PRPF38A	71	88.235	Panthera_tigris_altaica
ENSTRUG00000003374	prpf38a	71	87.446	ENSPTRG00000000739	PRPF38A	74	88.235	Pan_troglodytes
ENSTRUG00000003374	prpf38a	71	87.446	ENSPANG00000015483	PRPF38A	71	88.235	Papio_anubis
ENSTRUG00000003374	prpf38a	68	92.308	ENSPKIG00000011439	prpf38a	72	92.308	Paramormyrops_kingsleyae
ENSTRUG00000003374	prpf38a	71	85.714	ENSPSIG00000017487	PRPF38A	71	86.425	Pelodiscus_sinensis
ENSTRUG00000003374	prpf38a	67	89.862	ENSPMGG00000021352	prpf38a	76	89.593	Periophthalmus_magnuspinnatus
ENSTRUG00000003374	prpf38a	71	87.446	ENSPEMG00000023277	-	71	88.235	Peromyscus_maniculatus_bairdii
ENSTRUG00000003374	prpf38a	68	80.889	ENSPEMG00000011212	-	70	81.166	Peromyscus_maniculatus_bairdii
ENSTRUG00000003374	prpf38a	71	84.052	ENSPCIG00000022369	-	71	84.685	Phascolarctos_cinereus
ENSTRUG00000003374	prpf38a	68	94.118	ENSPFOG00000004248	prpf38a	72	94.118	Poecilia_formosa
ENSTRUG00000003374	prpf38a	68	94.118	ENSPLAG00000010328	prpf38a	72	94.118	Poecilia_latipinna
ENSTRUG00000003374	prpf38a	68	94.118	ENSPMEG00000011804	prpf38a	72	94.118	Poecilia_mexicana
ENSTRUG00000003374	prpf38a	78	81.008	ENSPREG00000002835	prpf38a	58	95.213	Poecilia_reticulata
ENSTRUG00000003374	prpf38a	71	76.695	ENSPPYG00000001348	PRPF38A	71	76.991	Pongo_abelii
ENSTRUG00000003374	prpf38a	71	87.446	ENSPCAG00000013328	PRPF38A	71	88.235	Procavia_capensis
ENSTRUG00000003374	prpf38a	80	69.732	ENSPCOG00000020709	-	73	71.493	Propithecus_coquereli
ENSTRUG00000003374	prpf38a	71	87.446	ENSPCOG00000016387	-	71	88.235	Propithecus_coquereli
ENSTRUG00000003374	prpf38a	71	87.446	ENSPVAG00000009803	PRPF38A	71	88.235	Pteropus_vampyrus
ENSTRUG00000003374	prpf38a	68	93.213	ENSPNYG00000005571	prpf38a	72	93.213	Pundamilia_nyererei
ENSTRUG00000003374	prpf38a	68	92.760	ENSPNAG00000010399	prpf38a	71	92.760	Pygocentrus_nattereri
ENSTRUG00000003374	prpf38a	71	87.879	ENSRNOG00000009451	Prpf38a	71	88.688	Rattus_norvegicus
ENSTRUG00000003374	prpf38a	71	87.446	ENSRBIG00000036442	PRPF38A	74	88.235	Rhinopithecus_bieti
ENSTRUG00000003374	prpf38a	77	69.412	ENSRROG00000040003	-	72	71.946	Rhinopithecus_roxellana
ENSTRUG00000003374	prpf38a	71	87.446	ENSRROG00000032788	PRPF38A	71	88.235	Rhinopithecus_roxellana
ENSTRUG00000003374	prpf38a	71	87.446	ENSSBOG00000019515	PRPF38A	71	88.235	Saimiri_boliviensis_boliviensis
ENSTRUG00000003374	prpf38a	58	81.053	ENSSHAG00000006906	-	66	81.667	Sarcophilus_harrisii
ENSTRUG00000003374	prpf38a	74	74.583	ENSSHAG00000006029	-	74	77.828	Sarcophilus_harrisii
ENSTRUG00000003374	prpf38a	68	90.090	ENSSFOG00015013572	prpf38a	72	88.288	Scleropages_formosus
ENSTRUG00000003374	prpf38a	68	96.380	ENSSMAG00000015379	prpf38a	72	96.380	Scophthalmus_maximus
ENSTRUG00000003374	prpf38a	68	96.833	ENSSDUG00000001324	prpf38a	72	96.833	Seriola_dumerili
ENSTRUG00000003374	prpf38a	68	96.833	ENSSLDG00000014803	prpf38a	72	96.833	Seriola_lalandi_dorsalis
ENSTRUG00000003374	prpf38a	71	64.935	ENSSARG00000014458	PRPF38A	71	64.706	Sorex_araneus
ENSTRUG00000003374	prpf38a	71	85.714	ENSSPUG00000013259	PRPF38A	71	86.425	Sphenodon_punctatus
ENSTRUG00000003374	prpf38a	68	76.923	ENSSPAG00000010449	prpf38a	68	76.923	Stegastes_partitus
ENSTRUG00000003374	prpf38a	71	87.446	ENSSSCG00000028288	PRPF38A	71	88.235	Sus_scrofa
ENSTRUG00000003374	prpf38a	71	81.385	ENSTGUG00000008995	PRPF38A	71	81.900	Taeniopygia_guttata
ENSTRUG00000003374	prpf38a	78	98.047	ENSTNIG00000005533	prpf38a	82	98.047	Tetraodon_nigroviridis
ENSTRUG00000003374	prpf38a	71	87.446	ENSTBEG00000000725	PRPF38A	71	88.235	Tupaia_belangeri
ENSTRUG00000003374	prpf38a	71	87.446	ENSTTRG00000016139	PRPF38A	71	88.235	Tursiops_truncatus
ENSTRUG00000003374	prpf38a	71	87.446	ENSUAMG00000000625	PRPF38A	71	88.235	Ursus_americanus
ENSTRUG00000003374	prpf38a	71	87.446	ENSUMAG00000022674	PRPF38A	71	88.235	Ursus_maritimus
ENSTRUG00000003374	prpf38a	71	87.013	ENSVPAG00000000907	PRPF38A	71	87.783	Vicugna_pacos
ENSTRUG00000003374	prpf38a	71	87.446	ENSVVUG00000004475	PRPF38A	71	88.235	Vulpes_vulpes
ENSTRUG00000003374	prpf38a	68	87.330	ENSXETG00000008060	prpf38a	71	87.330	Xenopus_tropicalis
ENSTRUG00000003374	prpf38a	69	92.035	ENSXCOG00000007393	prpf38a	75	92.035	Xiphophorus_couchianus
ENSTRUG00000003374	prpf38a	68	94.118	ENSXMAG00000026143	prpf38a	72	94.118	Xiphophorus_maculatus