EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003454 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3779 bases
Position: chr12:7066751-7070529
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000008101	zf-C2H2	PF00096.26	5e-45	1	7
ENSTRUP00000008101	zf-C2H2	PF00096.26	5e-45	2	7
ENSTRUP00000008101	zf-C2H2	PF00096.26	5e-45	3	7
ENSTRUP00000008101	zf-C2H2	PF00096.26	5e-45	4	7
ENSTRUP00000008101	zf-C2H2	PF00096.26	5e-45	5	7
ENSTRUP00000008101	zf-C2H2	PF00096.26	5e-45	6	7
ENSTRUP00000008101	zf-C2H2	PF00096.26	5e-45	7	7
ENSTRUP00000008101	zf-met	PF12874.7	4.8e-16	1	3
ENSTRUP00000008101	zf-met	PF12874.7	4.8e-16	2	3
ENSTRUP00000008101	zf-met	PF12874.7	4.8e-16	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000008149	-	2965	-	ENSTRUP00000008101	566 (aa)	-	H2S6S9

Gene Model

Click here to download ENSTRUG00000003454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003454	-	68	40.994	ENSTRUG00000003111	-	87	40.994
ENSTRUG00000003454	-	80	33.813	ENSTRUG00000006180	si:ch211-216l23.1	96	36.111
ENSTRUG00000003454	-	60	39.394	ENSTRUG00000019558	-	57	37.748
ENSTRUG00000003454	-	90	37.368	ENSTRUG00000020582	-	99	37.368
ENSTRUG00000003454	-	65	50.847	ENSTRUG00000005180	-	87	50.847
ENSTRUG00000003454	-	66	32.296	ENSTRUG00000025881	-	68	31.733
ENSTRUG00000003454	-	80	33.793	ENSTRUG00000022066	-	88	38.202
ENSTRUG00000003454	-	60	46.903	ENSTRUG00000025189	-	68	46.903
ENSTRUG00000003454	-	67	43.885	ENSTRUG00000004525	gfi1b	56	43.885
ENSTRUG00000003454	-	54	38.217	ENSTRUG00000022391	-	50	45.370
ENSTRUG00000003454	-	60	35.849	ENSTRUG00000000419	sna2	56	36.275
ENSTRUG00000003454	-	68	37.895	ENSTRUG00000024073	-	72	41.270
ENSTRUG00000003454	-	77	45.349	ENSTRUG00000021167	-	98	45.349
ENSTRUG00000003454	-	53	50.000	ENSTRUG00000017423	sall3a	53	50.000
ENSTRUG00000003454	-	66	33.968	ENSTRUG00000008615	zbtb48	55	33.968
ENSTRUG00000003454	-	61	40.984	ENSTRUG00000011385	znf341	50	40.984
ENSTRUG00000003454	-	69	35.314	ENSTRUG00000022666	-	56	38.356
ENSTRUG00000003454	-	89	31.629	ENSTRUG00000019483	-	94	44.262
ENSTRUG00000003454	-	79	33.696	ENSTRUG00000014476	-	82	31.989
ENSTRUG00000003454	-	67	44.211	ENSTRUG00000003277	zbtb17	99	44.167
ENSTRUG00000003454	-	69	41.509	ENSTRUG00000015687	-	95	41.290
ENSTRUG00000003454	-	66	35.455	ENSTRUG00000025588	snai2	87	35.455
ENSTRUG00000003454	-	68	39.175	ENSTRUG00000000995	-	71	36.364
ENSTRUG00000003454	-	66	32.510	ENSTRUG00000011097	-	54	32.510
ENSTRUG00000003454	-	67	45.872	ENSTRUG00000007022	-	66	45.536
ENSTRUG00000003454	-	75	36.429	ENSTRUG00000015366	patz1	62	33.858
ENSTRUG00000003454	-	60	39.394	ENSTRUG00000012719	-	54	37.748
ENSTRUG00000003454	-	67	41.964	ENSTRUG00000023925	-	51	41.964
ENSTRUG00000003454	-	68	36.646	ENSTRUG00000007620	scrt2	52	36.646
ENSTRUG00000003454	-	67	31.395	ENSTRUG00000012157	-	88	31.395
ENSTRUG00000003454	-	66	47.482	ENSTRUG00000023491	-	65	47.482
ENSTRUG00000003454	-	67	43.077	ENSTRUG00000022919	-	80	50.311
ENSTRUG00000003454	-	94	44.295	ENSTRUG00000022076	-	93	44.295
ENSTRUG00000003454	-	75	38.408	ENSTRUG00000006896	-	84	38.408
ENSTRUG00000003454	-	67	38.276	ENSTRUG00000013906	-	95	38.276
ENSTRUG00000003454	-	71	33.333	ENSTRUG00000005880	-	53	34.056
ENSTRUG00000003454	-	50	35.366	ENSTRUG00000024008	-	55	35.366
ENSTRUG00000003454	-	81	49.091	ENSTRUG00000024009	-	98	49.091
ENSTRUG00000003454	-	74	40.777	ENSTRUG00000012273	-	79	40.777
ENSTRUG00000003454	-	68	31.948	ENSTRUG00000013850	prdm5	69	31.868
ENSTRUG00000003454	-	79	33.158	ENSTRUG00000022843	-	68	31.250
ENSTRUG00000003454	-	81	30.473	ENSTRUG00000020495	si:dkey-89b17.4	89	32.317
ENSTRUG00000003454	-	71	38.529	ENSTRUG00000001268	-	91	38.924
ENSTRUG00000003454	-	66	31.680	ENSTRUG00000019685	znf319b	87	32.239
ENSTRUG00000003454	-	72	40.476	ENSTRUG00000017456	znf236	67	40.476
ENSTRUG00000003454	-	65	31.176	ENSTRUG00000019941	-	58	31.176
ENSTRUG00000003454	-	65	34.932	ENSTRUG00000019940	-	54	32.370
ENSTRUG00000003454	-	59	36.111	ENSTRUG00000020208	-	56	36.111
ENSTRUG00000003454	-	70	35.735	ENSTRUG00000021675	-	78	35.735
ENSTRUG00000003454	-	59	31.548	ENSTRUG00000005241	gtf3ab	85	31.694
ENSTRUG00000003454	-	94	38.261	ENSTRUG00000005321	-	98	39.744
ENSTRUG00000003454	-	51	45.763	ENSTRUG00000023354	-	98	45.763
ENSTRUG00000003454	-	66	39.568	ENSTRUG00000011637	scrt1b	53	39.568
ENSTRUG00000003454	-	60	37.931	ENSTRUG00000021765	-	50	37.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003454	-	97	55.776	ENSACIG00000007000	-	92	43.728	Amphilophus_citrinellus
ENSTRUG00000003454	-	55	68.519	ENSATEG00000011115	-	100	68.519	Anabas_testudineus
ENSTRUG00000003454	-	65	72.174	ENSORLG00020010932	-	97	72.174	Oryzias_latipes_hni
ENSTRUG00000003454	-	60	34.899	ENSPNAG00000024689	wu:fe05a04	57	34.899	Pygocentrus_nattereri