EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000003567 (Gene tree)
Gene ID: 101068864
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7140 bases
Position: chr20:6451561-6458700
Accession: 101068864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000008370	RRM_5	PF13893.6	1.6e-06	1	1
ENSTRUP00000008370	RRM_1	PF00076.22	9.9e-14	1	1
ENSTRUP00000008370	SAP	PF02037.27	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000008420	-	3511	XM_011614793	ENSTRUP00000008370	815 (aa)	XP_011613095	H2S7J8

Gene Model

Click here to download ENSTRUG00000003567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003567	safb	98	43.243	ENSG00000160633	SAFB	78	63.115	Homo_sapiens
ENSTRUG00000003567	safb	100	77.605	ENSAPOG00000022508	safb	100	78.084	Acanthochromis_polyacanthus
ENSTRUG00000003567	safb	66	40.610	ENSAMEG00000012254	SAFB	90	40.883	Ailuropoda_melanoleuca
ENSTRUG00000003567	safb	100	72.014	ENSACIG00000006247	safb	100	72.162	Amphilophus_citrinellus
ENSTRUG00000003567	safb	95	76.942	ENSAOCG00000006308	safb	99	76.835	Amphiprion_ocellaris
ENSTRUG00000003567	safb	100	77.871	ENSAPEG00000023342	safb	100	78.110	Amphiprion_percula
ENSTRUG00000003567	safb	100	79.306	ENSATEG00000004998	safb	100	79.306	Anabas_testudineus
ENSTRUG00000003567	safb	94	39.282	ENSAPLG00000005780	-	93	43.720	Anas_platyrhynchos
ENSTRUG00000003567	safb	59	42.831	ENSAPLG00000006355	-	96	47.232	Anas_platyrhynchos
ENSTRUG00000003567	safb	98	43.396	ENSANAG00000028821	SAFB	91	42.021	Aotus_nancymaae
ENSTRUG00000003567	safb	100	74.128	ENSACLG00000001926	safb	100	74.248	Astatotilapia_calliptera
ENSTRUG00000003567	safb	98	61.893	ENSAMXG00000018154	safb	100	59.701	Astyanax_mexicanus
ENSTRUG00000003567	safb	95	42.632	ENSBTAG00000007875	SAFB	93	40.343	Bos_taurus
ENSTRUG00000003567	safb	71	52.323	ENSCJAG00000017081	SAFB	82	50.216	Callithrix_jacchus
ENSTRUG00000003567	safb	66	40.193	ENSCAFG00000018803	SAFB	79	40.830	Canis_familiaris
ENSTRUG00000003567	safb	66	40.354	ENSCAFG00020018943	SAFB	91	40.575	Canis_lupus_dingo
ENSTRUG00000003567	safb	95	43.148	ENSCHIG00000007262	SAFB	93	40.852	Capra_hircus
ENSTRUG00000003567	safb	57	45.257	ENSTSYG00000001851	-	92	43.141	Carlito_syrichta
ENSTRUG00000003567	safb	98	43.632	ENSCCAG00000020193	SAFB	91	41.724	Cebus_capucinus
ENSTRUG00000003567	safb	95	43.093	ENSCATG00000029994	SAFB	91	40.987	Cercocebus_atys
ENSTRUG00000003567	safb	64	41.789	ENSCLAG00000007734	SAFB	90	42.873	Chinchilla_lanigera
ENSTRUG00000003567	safb	95	42.649	ENSCSAG00000009949	SAFB	91	40.987	Chlorocebus_sabaeus
ENSTRUG00000003567	safb	91	43.924	ENSCPBG00000010936	-	91	45.455	Chrysemys_picta_bellii
ENSTRUG00000003567	safb	92	42.973	ENSCPBG00000010928	-	92	44.154	Chrysemys_picta_bellii
ENSTRUG00000003567	safb	98	41.582	ENSCANG00000019754	-	89	40.947	Colobus_angolensis_palliatus
ENSTRUG00000003567	safb	95	36.121	ENSCANG00000004774	-	88	49.254	Colobus_angolensis_palliatus
ENSTRUG00000003567	safb	99	65.196	ENSCSEG00000019870	safb	100	66.299	Cynoglossus_semilaevis
ENSTRUG00000003567	safb	100	64.024	ENSCVAG00000002226	safb	100	65.122	Cyprinodon_variegatus
ENSTRUG00000003567	safb	96	61.058	ENSDARG00000020467	safb	98	61.027	Danio_rerio
ENSTRUG00000003567	safb	66	41.883	ENSDNOG00000015746	SAFB	95	39.559	Dasypus_novemcinctus
ENSTRUG00000003567	safb	64	39.739	ENSDORG00000016200	Safb	89	38.856	Dipodomys_ordii
ENSTRUG00000003567	safb	64	41.946	ENSEASG00005023019	SAFB	90	42.610	Equus_asinus_asinus
ENSTRUG00000003567	safb	64	41.089	ENSECAG00000018659	SAFB	86	40.409	Equus_caballus
ENSTRUG00000003567	safb	99	63.006	ENSELUG00000022327	safb	99	63.006	Esox_lucius
ENSTRUG00000003567	safb	66	40.357	ENSFCAG00000011835	SAFB	91	40.300	Felis_catus
ENSTRUG00000003567	safb	98	40.729	ENSFALG00000013882	-	83	44.111	Ficedula_albicollis
ENSTRUG00000003567	safb	57	38.169	ENSFALG00000013881	-	92	44.551	Ficedula_albicollis
ENSTRUG00000003567	safb	68	39.692	ENSFDAG00000020306	SAFB	74	42.295	Fukomys_damarensis
ENSTRUG00000003567	safb	100	66.585	ENSFHEG00000004219	safb	100	68.826	Fundulus_heteroclitus
ENSTRUG00000003567	safb	100	64.817	ENSGMOG00000014280	safb	100	66.038	Gadus_morhua
ENSTRUG00000003567	safb	99	41.578	ENSGALG00000013365	-	92	45.057	Gallus_gallus
ENSTRUG00000003567	safb	64	42.338	ENSGALG00000001948	-	90	47.204	Gallus_gallus
ENSTRUG00000003567	safb	100	65.694	ENSGAFG00000016162	safb	100	65.811	Gambusia_affinis
ENSTRUG00000003567	safb	100	70.964	ENSGACG00000011385	safb	100	71.295	Gasterosteus_aculeatus
ENSTRUG00000003567	safb	95	46.456	ENSGAGG00000008424	-	94	47.704	Gopherus_agassizii
ENSTRUG00000003567	safb	73	48.466	ENSGAGG00000017702	-	89	52.525	Gopherus_agassizii
ENSTRUG00000003567	safb	98	43.361	ENSGGOG00000015109	SAFB	75	58.537	Gorilla_gorilla
ENSTRUG00000003567	safb	100	69.351	ENSHBUG00000009218	safb	100	68.389	Haplochromis_burtoni
ENSTRUG00000003567	safb	64	39.159	ENSHGLG00000015883	SAFB	90	40.643	Heterocephalus_glaber_female
ENSTRUG00000003567	safb	64	38.835	ENSHGLG00100004228	SAFB	70	40.584	Heterocephalus_glaber_male
ENSTRUG00000003567	safb	94	64.470	ENSHCOG00000001705	safb	99	64.424	Hippocampus_comes
ENSTRUG00000003567	safb	100	60.560	ENSIPUG00000024869	safb2	100	62.093	Ictalurus_punctatus
ENSTRUG00000003567	safb	60	38.889	ENSSTOG00000002783	SAFB	92	39.568	Ictidomys_tridecemlineatus
ENSTRUG00000003567	safb	100	73.551	ENSKMAG00000022308	safb	100	74.155	Kryptolebias_marmoratus
ENSTRUG00000003567	safb	100	75.118	ENSLBEG00000006015	safb	100	75.118	Labrus_bergylta
ENSTRUG00000003567	safb	65	43.274	ENSLACG00000018090	SAFB	97	47.903	Latimeria_chalumnae
ENSTRUG00000003567	safb	98	62.005	ENSLOCG00000003613	safb	99	61.860	Lepisosteus_oculatus
ENSTRUG00000003567	safb	98	42.286	ENSLAFG00000003840	SAFB	89	42.571	Loxodonta_africana
ENSTRUG00000003567	safb	95	43.093	ENSMFAG00000003885	SAFB	75	59.756	Macaca_fascicularis
ENSTRUG00000003567	safb	95	43.187	ENSMMUG00000017970	SAFB	75	59.756	Macaca_mulatta
ENSTRUG00000003567	safb	66	40.164	ENSMNEG00000035637	SAFB	75	59.756	Macaca_nemestrina
ENSTRUG00000003567	safb	95	41.458	ENSMLEG00000038637	SAFB	75	59.756	Mandrillus_leucophaeus
ENSTRUG00000003567	safb	100	77.392	ENSMAMG00000003357	safb	91	77.392	Mastacembelus_armatus
ENSTRUG00000003567	safb	100	75.178	ENSMZEG00005009120	safb	100	75.297	Maylandia_zebra
ENSTRUG00000003567	safb	64	43.115	ENSMGAG00000001051	-	96	47.439	Meleagris_gallopavo
ENSTRUG00000003567	safb	97	39.936	ENSMGAG00000001101	-	93	43.764	Meleagris_gallopavo
ENSTRUG00000003567	safb	87	37.888	ENSMICG00000046795	-	85	61.905	Microcebus_murinus
ENSTRUG00000003567	safb	67	42.347	ENSMICG00000008739	-	90	42.684	Microcebus_murinus
ENSTRUG00000003567	safb	94	42.210	ENSMODG00000001236	SAFB	90	41.304	Monodelphis_domestica
ENSTRUG00000003567	safb	100	75.414	ENSMALG00000020330	safb	100	75.414	Monopterus_albus
ENSTRUG00000003567	safb	98	41.794	ENSMLUG00000001081	SAFB	91	40.183	Myotis_lucifugus
ENSTRUG00000003567	safb	97	43.035	ENSNLEG00000013551	SAFB	95	41.425	Nomascus_leucogenys
ENSTRUG00000003567	safb	59	38.420	ENSOPRG00000011561	-	97	38.690	Ochotona_princeps
ENSTRUG00000003567	safb	64	41.071	ENSODEG00000014838	SAFB	90	41.272	Octodon_degus
ENSTRUG00000003567	safb	100	74.792	ENSONIG00000002318	safb	100	75.030	Oreochromis_niloticus
ENSTRUG00000003567	safb	87	38.686	ENSOCUG00000014628	SAFB	62	38.931	Oryctolagus_cuniculus
ENSTRUG00000003567	safb	98	71.324	ENSORLG00000016989	safb	100	71.138	Oryzias_latipes
ENSTRUG00000003567	safb	98	61.255	ENSORLG00020000404	safb	100	64.140	Oryzias_latipes_hni
ENSTRUG00000003567	safb	98	71.446	ENSORLG00015010733	safb	100	71.429	Oryzias_latipes_hsok
ENSTRUG00000003567	safb	100	71.875	ENSOMEG00000009066	safb	100	72.115	Oryzias_melastigma
ENSTRUG00000003567	safb	64	40.464	ENSOGAG00000027769	SAFB	90	41.005	Otolemur_garnettii
ENSTRUG00000003567	safb	81	38.275	ENSOARG00000007856	-	100	37.219	Ovis_aries
ENSTRUG00000003567	safb	95	39.414	ENSOARG00000007662	-	93	39.679	Ovis_aries
ENSTRUG00000003567	safb	98	43.243	ENSPPAG00000035129	SAFB	75	58.537	Pan_paniscus
ENSTRUG00000003567	safb	66	40.357	ENSPPRG00000017197	SAFB	91	40.300	Panthera_pardus
ENSTRUG00000003567	safb	98	43.243	ENSPTRG00000010335	SAFB	75	58.537	Pan_troglodytes
ENSTRUG00000003567	safb	95	42.824	ENSPANG00000007770	SAFB	75	59.756	Papio_anubis
ENSTRUG00000003567	safb	99	61.644	ENSPKIG00000009902	safb	99	61.187	Paramormyrops_kingsleyae
ENSTRUG00000003567	safb	98	45.833	ENSPSIG00000011679	-	92	48.029	Pelodiscus_sinensis
ENSTRUG00000003567	safb	99	45.588	ENSPSIG00000009367	-	93	46.473	Pelodiscus_sinensis
ENSTRUG00000003567	safb	57	49.165	ENSPCIG00000009504	-	93	50.524	Phascolarctos_cinereus
ENSTRUG00000003567	safb	100	67.231	ENSPFOG00000007745	safb	100	68.803	Poecilia_formosa
ENSTRUG00000003567	safb	100	64.426	ENSPLAG00000001614	safb	100	65.933	Poecilia_latipinna
ENSTRUG00000003567	safb	100	67.110	ENSPMEG00000021023	safb	100	68.682	Poecilia_mexicana
ENSTRUG00000003567	safb	100	65.636	ENSPREG00000012496	safb	100	67.182	Poecilia_reticulata
ENSTRUG00000003567	safb	95	42.265	ENSPPYG00000009428	SAFB	91	40.852	Pongo_abelii
ENSTRUG00000003567	safb	64	37.931	ENSPCAG00000006475	SAFB	88	39.269	Procavia_capensis
ENSTRUG00000003567	safb	96	40.482	ENSPCOG00000014090	SAFB	91	40.920	Propithecus_coquereli
ENSTRUG00000003567	safb	95	40.045	ENSPVAG00000004913	SAFB	84	40.100	Pteropus_vampyrus
ENSTRUG00000003567	safb	99	63.872	ENSPNAG00000021838	safb	98	63.872	Pygocentrus_nattereri
ENSTRUG00000003567	safb	95	42.619	ENSRBIG00000042509	SAFB	75	58.537	Rhinopithecus_bieti
ENSTRUG00000003567	safb	95	42.975	ENSRROG00000029278	SAFB	75	58.537	Rhinopithecus_roxellana
ENSTRUG00000003567	safb	98	43.632	ENSSBOG00000026291	SAFB	91	41.458	Saimiri_boliviensis_boliviensis
ENSTRUG00000003567	safb	99	60.894	ENSSFOG00015008156	safb	99	60.321	Scleropages_formosus
ENSTRUG00000003567	safb	100	75.776	ENSSMAG00000009316	safb	100	77.327	Scophthalmus_maximus
ENSTRUG00000003567	safb	100	74.850	ENSSDUG00000009652	safb	100	74.970	Seriola_dumerili
ENSTRUG00000003567	safb	100	76.850	ENSSLDG00000001670	safb	100	78.640	Seriola_lalandi_dorsalis
ENSTRUG00000003567	safb	60	39.640	ENSSARG00000010475	SAFB	92	38.786	Sorex_araneus
ENSTRUG00000003567	safb	56	40.684	ENSSPUG00000009747	-	96	40.554	Sphenodon_punctatus
ENSTRUG00000003567	safb	99	69.951	ENSSPAG00000015682	safb	99	69.951	Stegastes_partitus
ENSTRUG00000003567	safb	95	42.182	ENSSSCG00000013522	SAFB	98	41.045	Sus_scrofa
ENSTRUG00000003567	safb	64	42.928	ENSTGUG00000000502	-	94	44.919	Taeniopygia_guttata
ENSTRUG00000003567	safb	63	42.857	ENSTGUG00000000489	-	96	46.998	Taeniopygia_guttata
ENSTRUG00000003567	safb	91	71.755	ENSTNIG00000015470	safb	100	70.948	Tetraodon_nigroviridis
ENSTRUG00000003567	safb	77	75.000	ENSTTRG00000013588	SAFB	68	60.784	Tursiops_truncatus
ENSTRUG00000003567	safb	73	40.468	ENSUMAG00000009734	SAFB	87	41.362	Ursus_maritimus
ENSTRUG00000003567	safb	66	40.968	ENSVVUG00000013720	SAFB	79	40.967	Vulpes_vulpes
ENSTRUG00000003567	safb	100	66.948	ENSXMAG00000003458	safb	100	68.516	Xiphophorus_maculatus